| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 651,267 | 0 | A | T | 25.4% | 106.4 / 13.4 | 61 | L197* (TTA→TAA) | citC | citrate lyase synthetase |
| Reads supporting (aligned to +/- strand): ref base A (13/31); new base T (15/0); total (30/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.39e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCAGTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGT > NC_000913/651023‑651517 | ccagTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCa < 1:476115/251‑1 (MQ=255) aGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑GCTTTT‑AAAACCCAAttc > 1:295463/1‑249 (MQ=255) cgcATAACCTGGATGTAATGGGGGGAAACGCGACAAACAGGCTCCGTACCGACCAAGCGGAGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTATGTTCTTTACTGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGAATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TT‑GCTTTT‑GACAcccaaaacc > 2:218500/1‑243 (MQ=255) atatCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCccgccg > 1:138526/1‑251 (MQ=255) ggTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTc < 1:402745/250‑1 (MQ=255) tGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCCTTT‑TACACCCAAACCAGCCCGTCTTC‑At > 2:160630/1‑249 (MQ=255) gTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAATCCAGCCGGGCtttctagg > 2:357927/1‑245 (MQ=255) gggCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAg < 1:365058/251‑1 (MQ=255) gggCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGAGCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAATGGAACGTAGCGCGGGAGAGGATGTAGTCGGAGCCGCGATTCACAGGCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACGCCAAATCCAGCCGGTCTTC‑AG‑AGGGGAAg < 2:291540/251‑1 (MQ=255) cGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGGGTG‑CTTTTT‑TA‑ACCAAAACCAGcccggcttatttgggggagggg > 2:447900/1‑231 (MQ=255) gcgACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAAt < 1:388770/251‑1 (MQ=255) gACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TAAACCCAATCCAGCCGGTCTTT‑CT‑AGGGGAAGCGGgaagaaact > 1:42981/1‑248 (MQ=255) cAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑GG‑CCTTTT‑TATACCAAATCCCGCCGGGCTTC‑TT‑TGGGGGAGCggggagaaatctttttgacctc > 2:15763/1‑229 (MQ=255) gTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGCACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCCTTT‑AAACCCAAATACAAACCGTCTTCTCT‑AGGGGG‑GCGGGGAGAATCTTCTTTTACTaaaa > 2:431173/1‑250 (MQ=255) gACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TAAACCAAATCCAGCCGGGCTTC‑CT‑AGGGGGAGCGTGAAGAATCTTTTTTTTCTAAAAAc > 1:145091/1‑247 (MQ=255) acacCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACt < 2:42981/250‑1 (MQ=255) cgGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑Gc‑c < 1:409591/251‑1 (MQ=255) gggAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACGAAAAACAGATGCAGCCAGTCGCACTGTGCCGCA‑GC‑Ct < 2:43101/251‑1 (MQ=255) aGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑GCCTTT‑AACACCAAATCCAGCCGGGGTTC‑AT‑AGGGGGTGCGGGGAGAAATTTCTTTTGCTAAAAACAGAAGGAACCAGTGGCAACGGGCCGCC‑GC‑CTGtt > 1:321422/1‑251 (MQ=255) aGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCGTTT‑AACACCAAACTCAGCCGGGCCTC‑TT‑TGGGGAAGGGTGAAGAATCTTTTTTTTCTAAAAAAAGAGGCAACCAGGAGCACTGTGGCGCG‑GC‑CTGTTGAAt > 1:20707/1‑251 (MQ=255) gACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGAt < 1:450594/249‑1 (MQ=255) tCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAAACCAGCCGGGCTTT‑AT‑TGGGGGAGCGGGAAGAATCTTCTTTTACTAAAAACAGATGCAAACAGTCGCACTTTGCCCCA‑GC‑CTGTTGAATAAGAAAAAGGGGACCAttt > 1:235852/1‑250 (MQ=255) aGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGt < 1:358043/251‑1 (MQ=255) cAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTaa‑a < 1:278263/250‑1 (MQ=255) aaTTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑Agg < 2:60602/251‑1 (MQ=255) aaTTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGGCTTC‑CT‑AGGGGGAGCGGGAAGAATCTTCTTTTAATAAAAAAAGAAGCAACCAGTCGCACTGTGCCGCA‑GC‑CTTTTTAATTAGATAAAGGGGACCATTCGTaa‑a > 1:327147/1‑249 (MQ=255) aTTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAATCCAGCCGGTCTTC‑CT‑AGGGGGAGCGGGAAGAATCTTTTTTGACTAAAAACAGATGCAACCAGTCGCCCTTTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCTTAA‑Aggg > 1:263648/1‑251 (MQ=255) aTTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑Aggg < 2:357606/251‑1 (MQ=255) aaCAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTtc < 2:145091/251‑1 (MQ=255) aaaTGGTTAATGACGCGCTGTTCTTTAAGGAAGGAGCAAGGGAACGTAGCGCGGGAGAGGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑TC‑CTGTTGAATCAGATAACGGTGACCAGTCGTAA‑AGGGATTGGCGTtcat < 2:446795/250‑1 (MQ=255) aaTGGTTAATGACGCTCTGTTCTGTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGGACATTCGGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGcc < 1:423170/129‑1 (MQ=255) aTGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑GCTTTT‑TACAACAAAACCAGCCGGGCTTT‑AT‑AGGGGGAGGGGGTGGAATCTTTTTTGTCTCAAAACAGATGTAACCAGTCGCACTGTGCCGCC‑GCACGGTT‑AATCAGATAACGGTGGACATTCGTaa‑aaggggtggcggtccatc > 2:208502/1‑234 (MQ=255) aTGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAAACCAGCCGGGCTTC‑AT‑AGGGGGAGCGTGAAGAATCTTCTTTTACTAAAAAAAGATGCAAACAAGCGCACTGTGCCGCC‑GC‑CTGTTGAAACAGATAAAGGGGACCCTTCGTAA‑AGGGATTGGGGTTCATCAC‑AATGc > 1:182282/1‑250 (MQ=255) cGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCa < 1:272042/251‑1 (MQ=255) gCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCaa < 1:212795/251‑1 (MQ=255) gCTCTGTTCTGTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATATATTCGGAGCCACGATGCACAGTCTGGCGTGGAAAATCGGCGT‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCATTTGCACTGTGCCGCA‑GC‑CTTTTGAATCATATAGCGTTGACCATTCATAG‑ATCGATTGGCTTTCATCAA‑AATGCAGCCaa < 2:79696/251‑1 (MQ=255) ctGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAAt < 1:190867/249‑1 (MQ=255) gTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCCCGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGTATTGGCGTTCATCAC‑AATGCAGCCAATCtt < 1:22696/250‑1 (MQ=255) ttCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TGGCCTTTT‑AA‑ACCAAATACAGCCGGGCTTT‑CT‑TGGGGGAGCGGGAGGGATCTTCTTTGATCAAAAACAGAAGCAACCAGACGGACCGTGCCGCC‑GC‑CTGTTGGATCAGATAAAGGTGACCCTTCGTTA‑ATGGATTGGCGGTCAACACCAATGcggcaatatttt > 2:171180/1‑240 (MQ=255) gAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGCATATCGGCGG‑AG‑CCCTTT‑CACACCAAAACCAGCCGCGCTTC‑AT‑CGGGGGAGAGGGAAGAATTTTCTTTTACTAAAAAAAAATGCAACCCATCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAAAGGGGACCCTTCGTAA‑AGGGATTGGGGTTCATCAC‑AATGCAGCCAATCTTGTTTCCTgggt > 1:209632/1‑249 (MQ=255) aaGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATACAGCCGGTCTTC‑AT‑AGGGGAAGCGGGGAGAAACTTCTTTGACTAAAAAAAAATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAAAGGGGACCATTCGTAA‑AGGGATTGGGGTTCATCAC‑AATGCAGCCCATCTTGTTTCCTgggtg > 1:96134/1‑248 (MQ=255) aGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑CGACCTTTC‑AA‑AACAAAACCAGCCGGGCCTT‑AC‑AAGGGAAGCAGGCAGCATCTTCTTTTGCTAAAAAAAGATGACACCAGACGCACTGTGCCCCA‑GC‑CCGGTGAATCAGATAACGGGGACCACTCGTAACAGGGAT‑GGCGTTCATCCC‑AAAGCAGCCAATCTTTTTCCCTGGATGGAGAAAtt > 1:228466/1‑251 (MQ=255) gAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑GG‑CCTTTT‑AACACCAAATCCAGCCGGGCTTC‑AT‑AGGGGGAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCCGTCGCACCGTGCCGCA‑GC‑CTGTTGAAACAGATAAAGGGGACCATTCGTAA‑AGGGATTGGGGTTCATCAC‑AATTCAGCCAATCTTGTTTCCTGGATGACGGAAttttt > 1:121797/1‑251 (MQ=255) aCGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAATCCAGCCCGGCCTC‑AT‑AGGGGGAGCGTGAAGGAACTTCTTTGACTAAAAACAAATGCAACCAGTCGCACTGTGCCGCA‑GC‑CCGTTGAATCAGAAAACGGGGACCCTTCGGAA‑AAGGGTTGGCGTTCCTCAC‑AATGCAGCCAAACTTGTTCCCTGGGTGGCGAAAttttttt > 1:119094/1‑250 (MQ=255) tAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCCTTT‑AACACCAAATCCACCCGGGCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTTGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAAAGGGGACCCTTCGTAA‑AGGGGTTGGCGTTCATCAC‑CAAGCAGCCAATCTTTTTCCCTGGGTGAAGAAATTTTTTccgc > 1:400721/1‑248 (MQ=255) ggcgcGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCg < 2:96134/250‑1 (MQ=255) ggAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TA‑CCTTTTTAAC‑CCAAACCCAACCGGGATTC‑CTCAGGGAAAAGGGGAA‑AAACTTCTTTTACTCAAAAAAAAAGCCACCATTCGCACTGTGACGCC‑GC‑CTGTTGAAACAGATAACGGGGACCCTTTGCAA‑AAGGATTGGGGTTTCTCCC‑AATTTGACCAAACTTTTTCCCTGGGTGACGAAATTTTTTTAGCGATTCgg > 1:62282/1‑251 (MQ=255) cACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TAAACCAAATCCAGCCCGGCTTC‑CT‑AGGGGGAGCGGGAAAAATCTTCTTTGACTAAAAACAGATGCCACCAATCGCACTGTGCCGCC‑GC‑CTGTTGAATCAGATAACGGGGGCCATTCGTAA‑AGGGATTGGCGTTCCTCAC‑AAAGCAGCCAATCCTGTTCCCTGGGTGACGAAATTTTTTTAGCGATTCGGCCAAGCGTTTTAGTTGCGTg > 1:417826/1‑251 (MQ=255) aCGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAATCCCGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGGGACCCTTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCCATCTTGTTCCCTTGGTGACGAAATTTTTTTAGCGATTCGGCATTGCGTTTCAGGCGCGTgg > 1:243365/1‑251 (MQ=255) aCGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TACACCAAATCCAGCCGGGCTTC‑AT‑AGGGGGAGCGTGAAGAATCTTCTTTTACTAAAAAAAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAAATAACGGTGACCATTCGTAA‑AAGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTTTTCCCTGGATGACGAAATTTTTTTTGCGGTTCTGCCTAGCGTTTTCGTCGCGTgg > 1:363041/1‑251 (MQ=255) gATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑TCCACCAAATACCGCCGGTCTTC‑AT‑AAGGGAAGCGCGAAAAAACTTCCTTTACTAAAAACAGATGCCACCACTCGCCCCGT‑CCCCACGC‑CTGTTGAATAAGAAAACCGGGCACAATCGTCA‑AGGGATTGGCGGTCCTCCC‑AAAGCAAACACACTTTTTTTCTGGATGACGACATTTTTTCAGCGATTCGGCATAGCGTTTCCGTCGCGTGgcg > 1:479450/1‑251 (MQ=255) gCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCt < 1:91692/250‑1 (MQ=255) caGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGttt < 1:436705/251‑1 (MQ=255) cAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTcc < 2:479450/250‑1 (MQ=255) cAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTcc < 1:112020/250‑1 (MQ=255) aGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑ATCACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCATCCATTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCGGTCGTAA‑AGGGATTGGCGTGCATCAC‑AAGGCTGTCAATCGTGTTCTCTGGATGACGAAAGGTTTTCAGTGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCAt < 1:232910/251‑1 (MQ=255) aGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCAt < 1:447900/251‑1 (MQ=255) atCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATc < 1:30389/250‑1 (MQ=255) ttt‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACg < 1:160630/249‑1 (MQ=255) ttt‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCt > 1:180648/1‑251 (MQ=255) t‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTg < 1:357927/250‑1 (MQ=255) aaCACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGGAGAAACTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGAAA‑AGGGCTTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCTCGTGGCGCTGTTTTCCATCAGCACCATCCCGCCGGGTACGCTGGt > 2:396242/1‑251 (MQ=255) | CCAGTAGCGCATATCCTGGTTGTACTGGGCGGTAACGCGACAAAAGGGTTCAGTACCGACAAAGCGGTGAGTTACACCCAGCGCGGGAGCGAGGTACTGACGGAAAATCTTCAGATCAATTTCGGTGTAACAATGGTTAATGACGCTCTGTTCTTTAATGAAGTAGCAAGGGAACGTAGCGCGGGAGATGATGTATTCGGAGCCACGATGCACAGTCAGGCGTGGAATATCGGCGG‑TG‑CCTTTT‑AACACCAAATCCAGCCGGTCTTC‑AT‑AGGGGAAGCGTGAAGAATCTTCTTTGACTAAAAACAGATGCAACCAGTCGCACTGTGCCGCA‑GC‑CTGTTGAATCAGATAACGGTGACCATTCGTAA‑AGGGATTGGCGTTCATCAC‑AATGCAGCCAATCTTGTTCCCTGGATGACGAAATTTTTTCAGCGATTCGGCATAGCGTTTCAGTCGCGTGGCGCTGTTTTCCATCAGCACCATCACGCCGGGTACGCTGGT > NC_000913/651023‑651517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |