| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 115,797 | 0 | C | A | 26.1% | 68.9 / 12.7 | 46 | E435* (GAA→TAA) | hofB | T2SSE family protein |
| Reads supporting (aligned to +/- strand): ref base C (28/6); new base A (0/12); total (28/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.77e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TATCTCCTCGCCACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGC > NC_000913/115550‑116045 | tATCTCCACGCCTCTGAGCGCAATTGATGGCGCTTCGCTTCAGGCTTAGTGCGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑AATAGCATCCCCTCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCCGAGTTGCTTACTCGCCATGCGGCATCACCAGTACGCGGATTCACTCTTCAAAGGTGGTTCAGCCTTGCTCTACGGCAAGGCAGCCGTTTTcca > 2:420761/1‑248 (MQ=255) cACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATCGCCTCCCATCTTGCGCATTGCAGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGcc > 2:257449/1‑250 (MQ=255) cTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCAt > 1:281386/1‑250 (MQ=255) tgggcAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCAGCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGGTGCTTACTCGCCATGCGGCATCCCCAGTTCGCGGATTAACTCTTCAAAGGTTGTTTAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATa < 1:312944/247‑1 (MQ=255) aGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑Gcc > 2:483513/1‑251 (MQ=255) aaTTGATGGCGATTCGCTTCAGGCTTAGTGGGGTGACC‑ATCTGTTGATGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCA‑CATAGCATACCATCTTGCGCATTGCCGTTGCAGGCTATGCCATGCCAGCGCAAGCGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTACTTATTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCCGCAGTTTTCCAAAAGCGTACGCATACCC‑GCCTg > 2:434777/1‑251 (MQ=255) tcgcttacggcttagacggcaaaCC‑ATTTGTTGCAGTAGTGCCATAAGCAATAAAGTACGGCTCTCCACCACA‑AGAATCCCATCTTGCGCATTGCCGTCGCCGCTTATGCCATGCCAGCGCCAGCGTTGCTTACTAGCCATGCGGCCTACCCAGTACGCGCAATAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTAGGCCTACCC‑GCCTGTCGTGCGTGCGtt > 2:312224/22‑251 (MQ=255) cAGGCTTAGTGGGGTACCC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCACCCCATCTGGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCAATGCGGCACCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCTTTGCTCTACGGCCAGGCAGCCGTTTTAAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGc < 1:112369/251‑1 (MQ=255) cTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGAtt > 1:354622/1‑251 (MQ=255) gTGGGTTAACC‑ATCTTGTGCTGTGGTGCCAAAAGCAGAAAAGTACGGCTCTCGCCC‑CAAAGCACCCCATCTTGCGCTTTGCCTCCGCCGGTTATCCCATCCCGGCGCCAGGGTTGCTTACTCCCCATGCGGCACCCCCAGTACGCGGATTAACTCTTCAAAGGTGTTTAAGCCTTGCTCAACGGCCGGGCTGCCGTTTTCAAAAGGCGTTCGCATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAc < 1:388160/251‑1 (MQ=255) ggTAACCCATCTGTTGCTGTAGTGCCATAGGAAGTAAATGACGGCTCTCTGCC‑CAAAGCACCCCATCTTGCGCATTGCCGTCCCGGGTTATGCCATGCCAGCGCCAGAGTTGTTTACCCGCCATTCGGCACCCCCATTACGCGGATTAACTTTTAAAAGGTGGTTAAGCTTTGCTCAACGGCCTGGCAGCCGTTTAAAAAAAGCGTTCGCATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTc < 1:57561/251‑1 (MQ=255) aCC‑ATCTGTTGCTGTAGGGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATT‑AACAGTCGGTAt > 2:101715/1‑251 (MQ=255) cc‑ATCTGTTGCTGTAGTGCCATAAGCAGTACCGTACGGCTCTCTGCC‑AATAGCATCACATCTTGAGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCACCAGTACGCGGATCAACTCTTCAACGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCCAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAc > 2:300967/1‑242 (MQ=255) gCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGAc > 1:405426/1‑251 (MQ=255) gTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑Gc > 1:329818/1‑185 (MQ=255) gTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCAGCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑Gc < 2:329818/185‑1 (MQ=255) ggCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATggg > 2:183079/1‑251 (MQ=255) aGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGACAGCGCCAGAGCTGCTTACTCGCAATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTACAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAAt > 1:437253/1‑250 (MQ=255) aTCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAgg > 2:418716/1‑251 (MQ=255) ccccATCTTGCGCATGGCCGTCGCCGGTGATGCCATGCCAGCGCAAGTGTTGCTTACCCCCCAGGCGGCATCCCCAGTCCGCGGATAACCTCTTCAAGGGTGTTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTAAAAAAGCGTACGCATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGc < 1:53555/250‑1 (MQ=255) gcATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCAATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAGTAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCAt > 1:437962/1‑251 (MQ=255) gTCGCCGGTTATGCCATGCCAGCGACAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACTC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGTAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCg > 2:296300/1‑251 (MQ=255) gtttATGCCATGCCAGCCCCAGAGTGGTTTACCCGCCATGCGGCACCCCCAGTACGCGGATAACCTCTTAAAGGGTGGTAATGCTTTTCTCAACGCCCAGTCTGCCTTTGTCAAAAACCGTCCGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAg < 1:326723/249‑1 (MQ=255) ggatATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGCTTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGCCCAGGCAGCCGTTTTCAAACAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTCGCGGGAATAGGGTGACGAATGAACGGCGTTCAGGGCAGAACTTTAAATAAAGCCGTACTAccctacacaccgaggc > 2:9189/4‑235 (MQ=255) tatcctttcccaGCCCCAGTGTTCCTTACTCCCCAGGCGTCATCCCCAGTCCGCGATTTACCTTTTCAAGGTTGTTTAGGCTTTTCTCTACGCCCAGGCAGCCTTTTACAAAAAGCGTACACTTCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCa < 1:63954/241‑1 (MQ=255) tATGCCATGCCAGCGCCAGAGTTTCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCCGCCGTTTTCACCAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCCAC‑GTCGGTATTAGCGGAAATCAGCTTACGAATGACCGGCGTTATGGGCAGAACGTCAAATAAGGCCGTACGGCCATAAAAACCGGGGGAGCa > 2:252350/1‑250 (MQ=255) atgccatgccAGCGCCAGATTTGCTTACTCGCCAGGCGGCACCCCCAGTCCGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTCCGGCCAGGCAGCCTTTTTAAAAAAGCGTACGCAGCTCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTAGGGGCAGATCTTGAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCaa < 1:199968/250‑1 (MQ=255) tgccatgccaGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATg > 1:10307/1‑251 (MQ=255) ggcgcaagggTTGCTTACTCCCCAGGCGGCACCCCCAGTCCGCGGATTAACCCTTAAAGGGTGTTTAAGCTTTGCTCTCCGCCCAGGCGCCCTTTTTCAAAAACCGTCCGCATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAAcc < 1:483513/242‑1 (MQ=255) aGCGCCAGAGTTGCTTCCGCGCCATGCGGCACCCCCAGTACGCGGATTACCTCTTAAAAGTTGTTTAAGCCTTGCTCTAGGGCCAGGCAGCCTTTTTAAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCTGTACGACCATAAAAACCGTGGTAGCAATGTACACAAcc < 1:368991/251‑1 (MQ=255) cAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCggggg > 2:159806/1‑249 (MQ=255) cccaggcgccacccccAGTACGCGGATAAACTCTTAAAAGGTGTTTAAGCCTTGCTCTACGCCCAGGCACCCTTTTTAAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCa < 1:452285/239‑1 (MQ=255) gggcccccccAGTACGCGGATTAACTCTAAAAAGGTGTTAAAGCCTTGCTCTGCGGCCGGGCGGCGGTTTTAAAAAGGCGAACGCATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAgcggcg < 1:345733/245‑1 (MQ=255) ccgcgAATTACCTCTTAAGAGGGGGTTAAGCCTTGCTCTCCGGCCGGGCGGCCGTTTTAAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATACGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACAtt < 1:183079/250‑1 (MQ=255) cgGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGCACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGACTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAATCCGAGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCCTACATTGTc > 1:25556/1‑251 (MQ=255) aTTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGCGGGGCAGCGGCGATGGCCATACATTGTCTgg > 1:9863/1‑251 (MQ=255) caaaaGGTGGTAAACCCTTGCTCTCCGGCCGGGCGGCCGTTTTAAAAAGGCGTACGCATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGAT‑CAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGAt < 1:123620/248‑1 (MQ=255) aagggtggtTAAGCCTTGCTCTACGGCCAGGCAGCCGATTTCAAAAAGCGTACGCATACCA‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GGCGGGATTAGCGGAAATACGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAAGAAGGCCGGACGACCAGAACAACCGTTGTAGCAATGTACACAACCGGGTCCCTGCCAGGTGGGAAGCGGCGATGGTCATTCATTGTCTGGAATGTGGTTgg > 2:258632/4‑251 (MQ=255) agtgggtTAATCCTTGCTCCCCGCCCAGGCGGCGTTTTTAAAAAAGTGTACGAATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTGATGGGCAGAACTTCAAAGAAGGCCGTACGACCATAAAAACCGGGGTAGCAATGTACACAACCGGGGGCCTGCCAGTGGGGCATCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGc < 1:147204/247‑1 (MQ=255) tggtTACGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGGGGATGGGCTcc > 2:180975/1‑251 (MQ=255) gttagccctgcctctGCGGCCAGGCAGCTGTATAAAAAAAGCGCACGCCTACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTcccc < 2:40561/240‑1 (MQ=255) aGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTtgc > 2:244481/1‑251 (MQ=255) aGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTtgc > 2:158920/1‑251 (MQ=255) ggCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAAt > 1:54390/1‑251 (MQ=255) cccgtgctaGCCGTTTTAAAAAAGCGTCCGAATCCCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACaa < 1:44070/242‑1 (MQ=255) ccAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAAtgt > 2:55283/1‑251 (MQ=255) aGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACaaagctcgga > 2:44070/1‑242 (MQ=255) acAAAAAGCGT‑CCCATACCCCGCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGc < 1:215468/249‑1 (MQ=255) | TATCTCCTCGCCACTGCGCAGAATTGATGGCGATTCGCTTCAGGCTTAGTGGGGTAACC‑ATCTGTTGCTGTAGTGCCATAAGCAGTAAAGTACGGCTCTCTGCC‑CATAGCATCCCATCTTGCGCATTGCCGTCGCCGGTTATGCCATGCCAGCGCCAGAGTTGCTTACTCGCCATGCGGCATCCCCAGTACGCGGATTAACTCTTCAAAGGTGGTTAAGCCTTGCTCTACGGCCAGGCAGCCGTTTTCAAAAAGCGTACGCATACCC‑GCCTGTCGTGCGTGCGTTTCCAGCGATTCAAC‑GTCGGTATTAGCGGAAATAAGCTGACGAATGACCGGCGTTATGGGCAGAACTTCAAATAAGGCCGTACGACCATAAAAACCGTGGTAGCAATGTACACAACCGGGTGCCTGCCAGTGGGGCAGCGGCGATGGCCATACATTGTCTGGAATGTGGATGGGCTCCCCTTGCTGCCGGCGACAATGTGGGCAAAGTTTGC > NC_000913/115550‑116045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |