| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,611,455 | 0 | G | A | 21.1% | 108.3 / 10.6 | 54 | C93C (TGC→TGT) | yhhS | putative transporter YhhS |
| Reads supporting (aligned to +/- strand): ref base G (8/33); new base A (11/0); total (19/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CAGTGATAAAACACGACGCCTAACGGCGCACCCATCGCCATCGCCCCGTAAGTGACAATGCCGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTT > NC_000913/3611207‑3611704 | cAGTGATAAAACACGACGCCTAACGGCGCACCCATCGCCATCGCCCCGTAAGTGACAATGCCGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAagca < 1:89334/251‑1 (MQ=255) tAAAACACGAAGCCTAACGGCGCACCCATCGCCATCGCCCCGTAAGTGACAATGCCGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTTATCCTGCCCGCCG‑ATACCCCCGAACGCTCCAAAagaagacgcc > 1:104517/1‑243 (MQ=255) aCGGCGCACCCATCGCCATCGCCCCGTAAGTGACAATGCCGTTCCACGACATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCAAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTCATCCTGCCGTCAC‑ATAACCCCCACCGCGTAAAACACAGCCGCATAAACAGAAg‑acgac > 1:480100/1‑250 (MQ=255) ccagctcaatcgccCCGTAAGTTACAATGCCGGTCCACGAAATCACCCGCCCGATATGCAGCGAGCCATCCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTGTGCCCAATCCCAAGGACGACGCGCCCCAGGCTGAGTAATAACATGCTGATGGCAGTCAGTCTGGCTGTTAATCCTGCCGGCAG‑AGGCCCCAGGCCTCTCAACAATCAGCCGCATAAACCAAGG‑ACGACGATCTTTTT‑g < 2:462556/243‑1 (MQ=255) catcgccatcgcCCCGTAAGTTACAATGCCGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTTGCGGTTAATCCTGCCGTCAG‑ATACCCCAGATCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑gg < 1:486993/251‑1 (MQ=255) ccgccatcgccCCGTAAGTGACAATGCCGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGt < 2:138359/250‑1 (MQ=255) gACAATGCCGTTCCACGACCTCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTTCCGTCAG‑AAACCCCCGACCCCTCCAAAAACAGCCGCCTAAAACGAAG‑ACGACAACCTTTTT‑TGGGCCCAGCGAATCGGCggaa > 1:373293/1‑247 (MQ=255) cGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGGCCCAGCGAATCGGCGTAACGTCCGGCa < 2:312395/251‑1 (MQ=255) gTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACACCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCATACTGGCTGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAATCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCAt < 1:335489/251‑1 (MQ=255) ccACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCAATCGGGTCGATCCCGTTCCGGCCAAACTTTGCCCAATCCCAAGGATGAAGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGATAATCCTGCCGCCAGGTTACCCC‑GACCGCTCAAAAAGGAGCCGAAAAAAACGAAA‑ACGGCAAGTTTTTT‑GGGGCCCCGCGacacgggggaaaggccggcatg > 1:461642/1‑228 (MQ=255) cccGAAATCCCCCGCCCGATATGCATCGAGCCACCCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAACCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGTCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTG‑GGGTGCCAGCGAATCGTCGTAACGTCCGGCATGAgg < 2:42223/249‑1 (MQ=255) ccgcccgATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCAGAAACCGAAG‑ACGACAATCTGTTT‑GGGTCCCAGCTAATCGGCTTAACGGCCTGCATGAGGGCGGCTCAGCa < 1:417855/251‑1 (MQ=255) gATATGCAGCGAGCCAACCCCGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTgg < 2:261795/251‑1 (MQ=255) atatGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAg < 1:113911/242‑1 (MQ=255) gAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCCG‑CTACCCCAGACCGCTCCAAAAACAGCCGCATAAACCGAAG‑AAGACAATCTTTTT‑TGGTCCCCGCGAAACGGCGGAACGTCCCGCATGGGGGGGGGTCAGCCAGGGGGCGAAATAttt > 1:153407/1‑250 (MQ=255) aGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCATCAAGGTGGCGAAATATTGc < 1:177407/251‑1 (MQ=255) aacgccACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGAGGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCTAAG‑ACGACAAGCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGTTGGCGAAATATTGCAg < 2:281650/247‑1 (MQ=255) aCCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGGGGCGAAATATTGCAGG‑Ct < 1:379447/251‑1 (MQ=255) ccACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAATGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTg < 1:249712/251‑1 (MQ=255) ccACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAAATTTGCCCAATCCCAAGGATGACGAGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATTCTTCCCCCCG‑ATACCCCAGACCGCCCCAAAAACAGCCGCATAAACCGCAG‑AACACCAACTTTTT‑TGGTCCCAGCGCAACGGCGGAACGTCCGGCACGAGGGGGGCTCAGCAAGGTGGCGGAATAtttgcggg > 1:281650/1‑243 (MQ=255) cAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCCG‑AAAACCCCGACCCCCCAAAAAACAGCCGCCTACAACGCAG‑ACGACAATCTTTTTTGGGTCCC‑GCGAATCGGCGTAAAGTCCGGCATGAGGGCGGCTCAGCACGGGGGCGAAAAAATGCAGG‑CTGATAAcc > 1:352571/1‑251 (MQ=255) aaCGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGGGGCGAAATATTGCAGG‑CTGATAACCa < 1:122297/251‑1 (MQ=255) aaCGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGCATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATTCCGCCGTCAG‑ATAATCCCGACCCCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑TGGACCCAACGAATCAGCGGAACATCCGCGATTAGGGGGGCGCCGCAAGGTGGCGGAatcttttcggctggtaacc > 1:329860/1‑233 (MQ=255) aaCGCCCCATAGGGTCGATCCCGTTCAGGCAAAACTTTGCCCCATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACCGGCAGACTGGCGGTTTATCCCGCCGTCAG‑ATTACCCAGACCGCTCCAAAAACAGCCGGCTAAAACGAAG‑ACGTCAATCTTTTT‑GGGTGCCAGCGAATCGGCGGAAAGTCCGGGCTGTGGGCGGGCCAGCAAGGGGGCGGCAAATTGCCGG‑CTGGTAAccc > 1:410732/1‑250 (MQ=255) cccATAGGGTCGATCCCGTTCCGGCAAAGCTCTGCCCAATCCCAAGGATGACGCGCCCCAGGCCAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCTG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCATTTT‑GGGGCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGGAATATTGCAGT‑CTGATAACCCATCCt < 2:332681/251‑1 (MQ=255) cccATAGGGTCGATCCCGTTCCGGCAAAACGTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGATGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCt < 1:32793/251‑1 (MQ=255) cccAGAGGGTCGATCCCATTCCGGCAAAACTTTGCCCAATCCCAAGGATGACCCGTCCCAGGCAAAGTAATAACAGGCGGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCACAAAAAGCAGCCGCATAAGCCGAAG‑ACGACAATCTTTTT‑GGGTCCCTGCGAATCGGCGTAACGTCCGGCAGGAGGGCGGCTCAGCGTGGTGGCGAGATATTGCAGG‑CTGATAACCAATCCt < 2:85813/251‑1 (MQ=255) ccATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGGCCG‑ATAACCCAGACCGCCCAAAAAACAGCCCCAAAAACCGAAG‑AAGACCATCTTTTT‑GGGTACCACCGAATCGGAGTCAAGGCCGGCATGAGGGGGGGTCAGCAAGGTGGCGGAATATTTCAGG‑CTGATAACCAAACCtt > 1:29345/1‑250 (MQ=255) caggggccaTCCCGATCCGGCAAAACTTTGCCCAATCCCAAAGATGACGCGCCCCAGGCACAGTAAGAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGGCAG‑AGACCCCAGACCGCGCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCGAGCGAATCGGCGGAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGc‑cc < 2:318126/243‑1 (MQ=255) aGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGc‑cc < 1:387561/250‑1 (MQ=255) gTTCCGGCAAAACGTTGACCAAACCCAAGGAGGACGCGCACCAGGCAAAGTAATATCAGGCTGATGACAGGCGGGCTGCGGGTTAAACCTACCGACAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAGGCCGAAG‑ACGACAAGCTTTTT‑GGGACGCTGCGTATCAGCGTAACGTCGGGCATGAGGGCGGCTCTGCAAGTTCGCTAAAAATAGCAAG‑CTGATAACCAAGCCTGG‑CCAGAAGGCTCTaaa < 2:252737/251‑1 (MQ=255) ccGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAata < 1:236360/209‑1 (MQ=255) ccGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGc < 2:373293/250‑1 (MQ=255) aaCTTTGCCCCATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCcatcaca < 2:267359/251‑1 (MQ=255) aaCTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATTCTGCCGTCAG‑ATACCCCAAACCGCTCAAAAAACAGCCGCCTAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAAACGGCGTAAAGTCCGGCATGAGGGGGGCCCCGCAAGGGGGGGGAAAATTGCAGG‑CTGGTAACCAATCCTGC‑CCAGAAGGCGCTAAAGccccacac > 1:1532/1‑245 (MQ=255) ccAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGATAATCCCGCCCTCAG‑GTACCCCAAACCGCCCAAAAAGCAGCCGCCAAAAACGAAG‑ACAACCATCTTTTT‑TGGTCCCAGCGAAACGGCGGACCGTACGGCATGAGGGCGGCCCAGCAAAGTGGCGAAAAATTTCAGG‑GTGATTAACAATCCTGA‑CCACAAGACGCTCAAACCCATCACCTCATCGACATAGcc > 1:485909/1‑251 (MQ=255) aaGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCg < 1:68243/251‑1 (MQ=255) gATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATTCTGCCGGCAG‑ATACCCCCGGCCGCTCAAAAAACAGCCGCCTAAACCGAAG‑GCGACAATCTTTTT‑GGGTCCCCGCGAAACCGCGGAACGTCCGGCCTGAGGGGGGCCCCGCAAGGGGGGGAAATATTTCAGG‑CTGAATACCAATCCTTCACCCGA‑GGGGCTAAAGCCcatcaccatatgggcctaacccggg > 1:336608/1‑231 (MQ=255) gcCCCAGGCAAAGTAATAACAGGCGGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACagcg < 2:336608/251‑1 (MQ=255) ggCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGc < 1:93481/251‑1 (MQ=255) ggCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCACCCCCCCAA‑ACACCCCAGAACGCTCAAAAAACAGCCCCATAAACCGAAGGAC‑ACCAACTTTTT‑TGGTTCCCGCGAATCGGCGTAACGCCCGGCCTGGGGGGGGCCCCGGAAGGTGGCGCAATATTGTAGG‑CTGACAAACAATCACGC‑CCACAAGGGGCCAAAACCCACCCCATCATGGGCAAAGCTCGGGAATAAAGCGAGCGGc > 2:159383/1‑251 (MQ=255) gCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAAGCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCa < 2:50827/251‑1 (MQ=255) cAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATTCTGCCGTCAG‑GTAACCCCGAACGCCCAAAAAACAGCCGGATAAAACGGAG‑AAGACAATATTTTT‑TGGTGCCAGCGAAACGGCGTAAAGTCCCGCCAGGGGGGGGGTCAGCGAGGGGGCGGAATATTTCAGG‑CTGGTAAACAAACCTGC‑CCCGAAGGGGCCAAAATACATCCCATTATCGACAGAGCCCGGTAAttccgagaggggcg > 2:246640/1‑237 (MQ=255) aaaGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAAc < 1:188425/251‑1 (MQ=255) aataaCAGGCTGATGACAAGCAGACGTGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGCCCCAGCGAATCGGCGTAACGTCCGGCAGGAGGGCGGCTCAGCAATGTGGCGAAATATTGCAGG‑CTGATAACCAATCCAGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATATCCCGGTAAGACATCGAGCGTCAACCCGAt < 2:461642/251‑1 (MQ=255) taaCAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑CTACCCCCGACCGCTCCAAAAGCAAACGCATAAACCCAAG‑ACGAAAATCTTTTT‑TGGTCCCCGCGAATAAGCGGAAAGTCCCGCCTGAGGGGGGGCCCGCAAGGGGGCGGAATATTGCAGAACGGA‑AAACAATCCCGC‑CCAGAAGGCGCCACAGCCCATCACATCATGGACATAACCAGGCACTACagcgcgccgaaaaccgctgg > 1:448152/1‑235 (MQ=255) aGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAGCCCGATGGTGAg < 1:121766/251‑1 (MQ=255) aaaGGCAGACTGGCGGTTAAGCCTGCCGTCAG‑ATGCCCCAGACAGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTGG‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCAGGGAAATAGCCCGGGACTACTGAGAGCGGCAACCCGATGGTGAGGTAGCTGGc < 1:172620/249‑1 (MQ=255) gACTGGCGTGTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAAGCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGGGAGGTAGCGGGCGAAGTTa < 2:196115/251‑1 (MQ=255) cTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACCTCATGGACATAGCCCGGGAATACAGCGAGCGGCAACCCGGTGGCGCGGTAGCTGGCGAAGTTaa > 2:383887/1‑250 (MQ=255) aaTCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat < 1:162579/251‑1 (MQ=255) cTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGACATGAGGGCGGCCCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATag > 1:465795/1‑249 (MQ=255) cGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGGCTATAGAGACAATTCGCAAATTCAGgcgc > 2:6747/1‑251 (MQ=255) aaaaGCCGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAAc > 1:125443/1‑212 (MQ=255) aaaaGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAAc < 2:125443/212‑1 (MQ=255) aaaGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGt < 1:230757/251‑1 (MQ=255) agcagcCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGttt < 2:104517/251‑1 (MQ=255) | CAGTGATAAAACACGACGCCTAACGGCGCACCCATCGCCATCGCCCCGTAAGTGACAATGCCGTTCCACGAAATCACCCGCCCGATATGCAGCGAGCCAACCACGCCAACGCCCCATAGGGTCGATCCCGTTCCGGCAAAACTTTGCCCAATCCCAAGGATGACGCGCCCCAGGCAAAGTAATAACAGGCTGATGACAGGCAGACTGGCGGTTAATCCTGCCGTCAG‑ATACCCCAGACCGCTCAAAAAGCAGCCGCATAAACCGAAG‑ACGACAATCTTTTT‑GGGTCCCAGCGAATCGGCGTAACGTCCGGCATGAGGGCGGCTCAGCAAGGTGGCGAAATATTGCAGG‑CTGATAACCAATCCTGC‑CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTT > NC_000913/3611207‑3611704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |