| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,235,905 | 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC | yjbE–malM | yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4235905 | 4252280 | 16376 | 24 [0] | [0] 29 | yjbE–malM | yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4235904 | 0 (0.000) | 18 (0.740) +AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC |
18/386 | 0.3 | 100% | intergenic (+497/‑2) | pgi/yjbE | glucose‑6‑phosphate isomerase/uncharacterized protein YjbE |
| ? | NC_000913 | 4252281 = | 0 (0.000) | intergenic (+1807/‑225) | malM/ubiC | maltose regulon periplasmic protein/chorismate lyase | |||||
CTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCA > NC_000913/4252046‑4252528 | agtttatgatttttattgttatttaaatataagttgaaatttacctttgatattcattccaattatcctaaaacgacatcgctaattacccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtcagtaaaggacaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAAc > 1:24972‑M2/236‑250 (MQ=255) ttatgatttttatggttatttccatataacttgaatcttatatttgatattcattccaattctcctaaaacaccatcgctaattccgcgcgccgtaattcgaatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaacttgtaagtaacggaaaacatcaacgttcgcaaacgaaactgccgatatgcggccgcTAAGTAAAGGAAAACATc > 2:130410‑M2/233‑250 (MQ=255) gttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtcaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAACGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGcc > 2:98098‑M2/204‑251 (MQ=255) aaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCt > 1:279679‑M2/200‑250 (MQ=255) tatttgatattcattccaattatcctaaaaagccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgacatgtttttgggtaaatctccattcattcaatgaagggaaattgtacgtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGc > 2:270916‑M2/193‑251 (MQ=255) attccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGGTGCCCTCGCCAGCAc < 2:26295‑M2/71‑1 (MQ=255) ccaattatcctaaaacgccatcgctaattccccgcgccataattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggcaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACggg > 1:121664‑M2/178‑251 (MQ=255) ccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgctcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggcaattgtaagtaaaggaaaacatcaacgttcgcaaaagaacatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTa > 2:152785‑M2/161‑249 (MQ=255) cgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGtttt < 2:74275‑M2/106‑1 (MQ=255) gccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtacaggaaaccatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTAcc > 1:107365‑M2/143‑251 (MQ=255) gccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacggtcgcaaaagaaaatgccgatgtgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTGCAACATCGTTTTAcc < 2:107365‑M2/109‑1 (MQ=255) atactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTttgtt > 2:72799‑M2/116‑251 (MQ=255) cccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacagcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGTGCATCGGTAAAGCGTAAGGTGCAACATCGTTGTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTa < 2:266297‑M2/144‑1 (MQ=255) gcccgaaatgtttttgggtaaatctccattcattcaatgaagggacattgcaagtaaaggaaaacatcaacgttcgaaaacgaaactgcagatttgcagccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTAtt > 1:286614‑M2/104‑246 (MQ=255) gaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACtt < 1:70411‑M2/152‑1 (MQ=255) ttcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTaa > 2:74413‑M2/76‑250 (MQ=255) cattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAaca < 1:98577‑M2/178‑1 (MQ=255) agtcaatgaagggaaattgtaaggaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAacac < 1:98098‑M2/179‑1 (MQ=255) taaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCttt > 1:146308‑M2/50‑250 (MQ=255) tcaacgttcgcaaaagcaaatgcagatttgcggctgcTAAGTAAAGGACAACCTCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGCTTGTTGCGTTTTTGTTGCGTATTCGCTCCCTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACg > 2:113570‑M2/38‑251 (MQ=255) acgttcgcaaaagaaaatgccgatttgcggccgcTAAGTACAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACgg > 2:76019‑M2/35‑249 (MQ=255) gctcgcaaaagaaaatgccgatgtgcggccgcTAAGTAAAGGACAACATCACCGTGCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGCTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGCTCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACCATGCCTTTACGTTATGTAACGgag > 2:65624‑M2/33‑249 (MQ=255) ttcgcaaaagaaaatggcgatttgcggcagcTAAGCAAAGGAAACCATCAACGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCATCGCCAGCACGGGCATCGGTAAAGCGTCAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTTTGTAtcggagcgt > 2:42226‑M2/32‑248 (MQ=255) gcaaatgccgatttgcggccgcTACGTAAAGGAAAACATCAACGTTACTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCCCTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTCTGTAACGGAGAGTTCGCCATGt > 2:57121‑M2/23‑251 (MQ=255) gaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGCTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAATGGAGAGTTCGGCATGt > 1:20144‑M2/23‑251 (MQ=255) aaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCt < 1:274407‑M2/185‑1 (MQ=255) aaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTAATGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCt > 2:274407‑M2/22‑206 (MQ=255) gccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCCTTACGTTATGTAACGGAGAGTTCGGCAtgtcacccc < 2:49634‑M2/235‑4 (MQ=255) gcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCa > 2:35821‑M2/3‑250 (MQ=255) | CTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCA > NC_000913/4252046‑4252528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |