| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,139,771 | 10483 bp→TG | [ptsA]–[eptC] | [ptsA], frwC, frwB, pflD, pflC, frwD, yijO, [eptC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4139771 | 4150253 | 10483 | 26 [0] | [0] 25 | [ptsA]–[eptC] | [ptsA],frwC,frwB,pflD,pflC,frwD,yijO,[eptC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4139770 | 0 (0.000) | 25 (0.820) +TG |
25/486 | 0.3 | 100% | coding (2452/2502 nt) | ptsA | putative PTS multiphosphoryl transfer protein PtsA |
| ? | NC_000913 | 4150254 = | 0 (0.000) | coding (12/1734 nt) | eptC | phosphoethanolamine transferase EptC | |||||
CAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATT > NC_000913/4150017‑4150495 | gcaaacagaatgccctcatcaccaatcgctttttgcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCAt > 1:170438‑M2/238‑249 (MQ=255) gccctcatcaccaatcgctttttgcagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtccccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGt < 1:174302‑M2/25‑1 (MQ=255) cagacgcggcagcacttcccatatggactccttgctggcagcgataatgctcgggttagttggcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTa < 1:170456‑M2/49‑1 (MQ=255) cggcagcacttcccatatggactcattgctggcagcgataatgctcgggttcgttgtcaccccggcaatggggaatatgcgtgccagccgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttcccgttcatgttgcagcaggctggcgctagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGCAACAATATCGCAGAATGTAACGAc > 2:301096‑M2/197‑250 (MQ=255) cagcacttcccatatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAAtt < 1:278578‑M2/58‑1 (MQ=255) catatggactccttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtgtccttttagagtgccatttcatgtttcagcaggctggcgatagcgtcagcagagggtgTGTGGGATGCAGAAGAAGAACCTGTCTGGAAGAAATATCTCCTGATGTAACGAGAATTGCTTAAGGat < 2:285213‑M2/68‑1 (MQ=255) cttgctggcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAagga > 1:23482‑M2/173‑249 (MQ=255) gcagcgataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccaggcgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagtgcatgttgcagcaggctggcgatagcgtcggcagaggcggTGTGTAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTATCGACAATTCCTTAATGGTATCTGAAGGTATATTCAg < 2:300991‑M2/86‑1 (MQ=255) ataatgctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTg > 1:182266‑M2/160‑251 (MQ=255) gctcgggttagttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATaa < 1:295489‑M2/97‑1 (MQ=255) agttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACa > 1:228526‑M2/146‑200 (MQ=255) agttgtcaccccggcaatggggaatatgcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACa < 2:228526‑M2/55‑1 (MQ=255) gcgtgccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTa < 2:199921‑M2/133‑1 (MQ=255) gccagacgttcgacttctgcgacgttagcggtgtccagatacagttccatgatgtttcctttgacagttccagtgcatgatgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGGAACGGCAATTCCTTAAGGATATCTGAAGGTATATTCAGAATGTGAATGAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAAc < 1:301096‑M2/137‑1 (MQ=255) agacgttcgacttctgcgacgttagcggtgtccagctacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAAc > 2:121990‑M2/112‑248 (MQ=255) ttctgcgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTc > 1:117254‑M2/101‑248 (MQ=255) cgacgttagcggtgtccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAAcc > 1:272784‑M2/96‑251 (MQ=255) ccagatacagttccatgatgtttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCAc < 1:218488‑M2/171‑1 (MQ=255) gttccatgatgtttccttttacagttccaggtcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCTCAAAAGCACGAGGGTTTg > 2:116529‑M2/72‑251 (MQ=255) tttccttttacagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGa > 2:29502‑M2/61‑250 (MQ=255) acagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGcc < 2:54276‑M2/199‑1 (MQ=255) cagttccagttcatgttgcagcaggctggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTCAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCgg > 2:142945‑M2/51‑251 (MQ=255) ggcgatagcgtcggcagaggctgTGTGGAATGCATAGTAAGAGCCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAACCGAGGGTGTTAGAACAGAAGTATTTCAGAAACCCCTCGCCCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCgg < 2:75370‑M2/228‑1 (MQ=255) ggcgatagcgtcggcagaggctgTGTGGAATGCATAGAAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATCCCTTAAGGATATCGGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAACCCCTCCCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACCCATACCTGCCGCAATccc < 2:263622‑M2/226‑1 (MQ=255) cagaggctgTGTGGAATTCATAGTAAGAACCTGTCTTGAAAAAATTTCGCCGAATGTAACGACAATTCTTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACTGAAGTTTTTCAGAAAACCGTCGCGCTAAAGCACGGGGGGTTGCAGAAGAGGAAGATTAGCAGTGAGTGCGCATACCTGCCGCAATCCCGGCAATAGTGACCAtt < 1:292356‑M2/242‑1 (MQ=255) | CAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAAAGAGGTTTAGCCTGGACTTCTGTGGAATGCATAGTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATT > NC_000913/4150017‑4150495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |