Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,675,4110TG32.7% 70.3 / 10.7 52V209G (GTC→GGC) yhjEputative transporter YhjE
Reads supporting (aligned to +/- strand):  ref base T (4/31);  new base G (17/0);  total (21/31)
Fisher's exact test for biased strand distribution p-value = 2.73e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GCTGCTGGCGCTGGCTCGATTTGGTCAGGGTCTGGGCTTAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAGTGTT  >  NC_000913/3675163‑3675657
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                  
gctgctgGCGCTGGCTCGATTTGGTCAGGGTCTGGGCTTAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTGCTCGGCGGTGCTGGt                                                                                                                                                                                                                                                                    <  1:361869/249‑1 (MQ=255)
gctcctggcgcgggcTCGATTTGGTCAGGGTCTGGGCTGAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCTATTGGCTTCTTCTTTCCCAATGGCACTTTCTGGCTGCTTTCCTGGCTTCGGGCCGACGAGCAGTTGATGAGCGGGGGCTGGCGTGCGCCATTTAGCTTCTCTGCTGTGCTGGTCa                                                                                                                                                                                                                                                                  <  2:24115/247‑1 (MQ=255)
                             gTCTGGGCTTAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTg                                                                                                                                                                                                                                    <  2:131302/251‑1 (MQ=255)
                                          cGGTGAATGGGGCGGCGCGGCGCGGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGGTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCg                                                                                                                                                                                                                       <  1:218664/250‑1 (MQ=255)
                                               aaTGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGttt                                                                                                                                                                                                                 <  1:16162/251‑1 (MQ=255)
                                                          gcggcgcTGCTGGCGACTGAAACCGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCGTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGc                                                                                                                                                                                                    <  2:98223/251‑1 (MQ=255)
                                                               gctgctGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCCCTA‑TCCGCCCGTATGTTCGCGTGTCGCCTCCT‑GAGTCCCCGGCGGTTG‑AG‑AAAGTCGC‑tcaac                                                                                                                                                                                              >  1:150072/1‑247 (MQ=255)
                                                                  gctgGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCg                                                                                                                                                                                            <  1:344505/250‑1 (MQ=255)
                                                                   ctgGCGCCTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGTGCCTTT‑TCGGCCTTGATGTTCGCGTGGTGCCGCCT‑GGGTCGCCGGTGtttttggaaagtggcgaagcga                                                                                                                                                                                              >  2:193340/1‑231 (MQ=255)
                                                                                    cccACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCCGGGCCTTA‑TTGGCCTGGTTTTTTGCGGGGCGCTGCAT‑GAGTCGCCGGGGGTTG‑GG‑AAAATCGC‑CAAAACG‑gaaaaaaaagggaagaacc                                                                                                                                                                        >  1:434384/1‑238 (MQ=255)
                                                                                     ccACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGGGCTGGTCATTT‑TCGGCCTGTATGTTCGCGGGTTGCTGCCT‑GAGTCGCCGGGGGTTG‑AG‑AAAAGCGC‑TAAAACG‑AAAAAACAGGTGAA‑GA‑Accc                                                                                                                                                                     >  1:100349/1‑251 (MQ=255)
                                                                                         cgcgCAAACGTGCACTGGAGGGCTCCTTGCCGCAGCTGGGCGCACCGATGGGCTTCTTCTGTGCCAATGGCACCTTCTTGCTGCTTTCCTGGCTACTGACCGACTAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCTGCGGTGCTGGTCATTA‑TCGGCCTGTATGGTCGCGTGTCGCTGCAT‑AAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑GAAAGCG‑AAAAAACAGTTGAA‑GA‑TCCCGCtt                                                                                                                                                                 <  2:223114/251‑2 (MQ=255)
                                                                                           cgcAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCCTTA‑TCGGCCTGTATGTTCGCGCGGCGCCGCAT‑GGGTCGCCGGGGTTTG‑TG‑GAAGACGC‑GTAAGCG‑AAAAAACAGGGGGA‑GA‑Tcccccttgg                                                                                                                                                               >  2:87392/1‑245 (MQ=255)
                                                                                             aaaaCGGGCACTGGAGGGCTACGTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCGGTGCCAATGGCACTTTCTTGCTGCCTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCAGTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAG‑GAGTCGCCGGTGTTTG‑AG‑AAAGGCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTa                                                                                                                                                             <  2:292914/250‑1 (MQ=255)
                                                                                                 cGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCCTTA‑TCGGCCTGGATGTTCTCGTGTCGCTGCAT‑GAGGTGCCGGGGGTTGTGG‑AAAG‑CGC‑TAAAACG‑GAAAAAAAGGGGAA‑GA‑ttcccccggggacgcc                                                                                                                                                         >  1:148519/1‑236 (MQ=255)
                                                                                                                tCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCCGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGGGCTTGGCCTTA‑TTCGCCTGCATGTTCCCGTGGCGCTGCCT‑GCGTCGCACGTGGTTG‑AG‑AAAGTTGC‑CCAAGGG‑AACAAAAAGGTGAA‑AA‑TCCCCCGGGGGAAGCTGCTG‑A‑CCCAAAATGt                                                                                                                                        >  1:217666/1‑251 (MQ=255)
                                                                                                                tCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGCCTTTATGTTCGCGTGTCGCTGCCT‑GGGTCGCCGGTGTTTT‑TG‑AAAGTCGC‑TTAAGCG‑AAAAAAAAGGTGAA‑GA‑TTCCGCTGGGGACGCTGCTG‑G‑CCAAACATGt                                                                                                                                        >  1:125878/1‑251 (MQ=255)
                                                                                                                 ccTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTGTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGtt                                                                                                                                       <  1:166934/251‑1 (MQ=255)
                                                                                                                          aGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCAGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGGGTTTG‑GG‑AAAGGCGC‑TAAAGCG‑AAAAAAAAGGGGAAAGA‑‑CCCCCTGGGGACGCCGGTG‑G‑CCAAACATGTTCGCGTTAcc                                                                                                                              >  1:189380/1‑251 (MQ=255)
                                                                                                                                 cgcACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGGACCGGGACTTA‑TAGGGCTGTATTGTCGCGCGTCCGGGCAT‑TAGTTCCCGGGGTTTT‑GG‑AAAGATGC‑TAAAGAG‑AAAAAAAAGGGGAA‑GA‑TCCCGCTGGGTAAGCTGCTGGA‑CCaacaagttgtcgtgacccaactgg                                                                                                                        >  1:204962/1‑229 (MQ=255)
                                                                                                                                     ccGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TAc                                                                                                                  <  1:403307/251‑1 (MQ=255)
                                                                                                                                          tGGCTTCTTCTTTGCCAATGGCACTTTCGTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTGCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTc                                                                                                              <  1:256871/250‑1 (MQ=255)
                                                                                                                                                 ttcttTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑GCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCg                                                                                                                                                                                                                       <  1:30772/147‑1 (MQ=255)
                                                                                                                                                        ccAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAAcc                                                                                              <  1:5938/251‑1 (MQ=255)
                                                                                                                                                          aaTGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTCTGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTTGGCATTT‑TCGGCCTGTTTGTTTGCGTGTCGCTGGAT‑GAGGCGCCGGGGGTTG‑AG‑AAAGACGC‑TGAAGAG‑AAAAAACAGGGGAA‑GA‑TCCCCCTGGGGAAGCTGCTG‑A‑CCAAACACGTTCGCGTAACCGTACTGGGGAACGTTC‑TTATGGT‑GGCaaacct                                                                                            >  1:56317/1‑247 (MQ=255)
                                                                                                                                                           aTGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTAATGGACCGGT‑TGTTTGGGAGTCCCTGCATTAAGCCCCGGGGGTTTG‑GG‑AAA‑TCGC‑CAAAGAG‑AAAAAAAAGGGGAA‑GAATCCC‑CTTGGGAAGCTGCTG‑AACCAAA‑ATGTTCGCGTAACCATACCGGG‑GAAGTTCACTATGTT‑GGCAAccctt                                                                                           >  1:419355/1‑248 (MQ=255)
                                                                                                                                                               cACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGc                                                                                       <  1:17721/251‑1 (MQ=255)
                                                                                                                                                                aCTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCt                                                                                      <  1:460611/251‑1 (MQ=255)
                                                                                                                                                                   ttCTTGCGGCTTTCCTGGCTTCTGACCGCTGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCCTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCT‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGGAATCGTACTGGG‑TACGTTAATTATGCT‑GGCAACCTATACGCTGt                                                                                    <  2:113841/250‑1 (MQ=255)
                                                                                                                                                                       tgctgcTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCGCGGCGGTGCTGGTCAGTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTGG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑GCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCATCCTATACGCTGtttt                                                                                 <  2:176817/249‑1 (MQ=255)
                                                                                                                                                                           gctTTCCTGGCTACTGGCCGGCGAGCAGGTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGGATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGGCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCCG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTAcatc                                                                            <  2:20288/250‑1 (MQ=255)
                                                                                                                                                                            ctTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGCCCTTATGTTTGCGTGTCGCTGCCT‑GAGTCCCCGGGGGTTT‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAAAAGGGGGA‑GA‑ACCCGCTGGGGACGCTGCTG‑A‑ACCAACATGTTCGCGGAAACGTCATGGG‑TACGTTCATTATGCT‑GGCAAACTATAAGCCGGTTTAcatcat                                                                          >  1:468960/1‑251 (MQ=255)
                                                                                                                                                                               tCCTGGCTACTGACCGCCGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGCCTGTTTGTTCGCGTGTCGCTGCAT‑GGGGCGCCGGGGGTTG‑AG‑AAAGTCGC‑TAAAACG‑AAAAAAACGGGGAA‑AA‑TCCCGCTGGGGACGCTGCTG‑A‑CCAAACCAGTTTGCGTAACCGTCCTGGG‑TACGTTCATTTTGCT‑GGCAACCTTTACGCTGTTTTTcatcattac                                                                       >  1:386861/1‑248 (MQ=255)
                                                                                                                                                                                   ggCTACGGGCCGACGAGCAGTTTATGGGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCAGTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTc                                                                   <  2:92781/251‑1 (MQ=255)
                                                                                                                                                                                       aCTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCAGTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTAc                                                                <  1:273103/250‑1 (MQ=255)
                                                                                                                                                                                       aCTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGGCTGGTTGTTTGCGTGGCGCTGCAT‑GAGGCGCCGGTGGTTG‑GG‑AAAGGCGC‑TAAAGCG‑AAAAAACAGGGGAA‑GA‑TCCCGCCGGGTAAGCCGCTG‑A‑CCAAAAATGTTTGCGGAACCGGACTGGG‑GAAGTTTATTATGCT‑GGCAACCTATACGCGGTTTTTCATCATGACGGGCTaat                                                               >  1:80968/1‑249 (MQ=255)
                                                                                                                                                                                          gACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAG‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTActct                                                             <  2:434384/250‑1 (MQ=255)
                                                                                                                                                                                          gACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGGATTA‑TCAGCCCGTATGTTTGCGTGGCGCTGCCT‑GCGGCGCCGGGGGTTG‑AG‑AAAGGCGC‑TCAAGCG‑AAAAAACAGGGGAA‑GA‑TCCCGCTGGGGACGCTCCTG‑A‑CCAAACAAGTTTGCGCAACCGGACTGGG‑GAAGGTCCTTATGCT‑GGCAACCTATACGCTGTTTTTCATCCTGACGGTCTCctctt                                                            >  1:47546/1‑250 (MQ=255)
                                                                                                                                                                                           aCCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTAt                                                           <  1:87392/251‑1 (MQ=255)
                                                                                                                                                                                            ccGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACAGGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATg                                                          <  1:307387/251‑1 (MQ=255)
                                                                                                                                                                                             cgacgaGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCT‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCAt                                                                                                            <  1:298731/201‑1 (MQ=255)
                                                                                                                                                                                                 gaGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCtt                                                     <  1:181424/251‑1 (MQ=255)
                                                                                                                                                                                                 gaGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGGCTGTATGGTTGCGGGTCGGTGCAT‑GAGTCGCCGGGGTTTT‑GG‑GAAGGCGC‑TAAAGCG‑AAAAAACAAGTGAA‑GG‑TCCCGCTGGGGACGCGGCGG‑G‑CCAAAAATGTTTGCGTAAACGGACTGGG‑GAGGTTCATTATTCT‑GGGAACCTATACGCTGGTTTTCATCCTGCCGGTCTACTCTATGACCtt                                                     >  1:429830/1‑251 (MQ=255)
                                                                                                                                                                                                 gaGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGCCTGGTTGGTCGCGTGGCGCTGCAT‑GAGTTGCCGGTGGTTG‑AG‑AAAGGCGCCTAAA‑CG‑AAAAAAAAGGGGAA‑GA‑TCCCCCTGGGGACGCCGCTG‑A‑CCAAAAATGTTCTCGTAACCCTACTGGG‑TACGGTCATTATGCT‑TGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCtt                                                     >  1:73457/1‑251 (MQ=255)
                                                                                                                                                                                                         tATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGGCATTA‑TCGGCCTGTATGTTCGCGGGTCGCTGCAT‑GAGTCGCCGGGGTTTG‑AGGAAAG‑CGC‑TAAAACGGAAAAAAC‑GGGGGA‑GA‑TCCCGCTGGGGAAGCCGCTG‑A‑CCCAACATGTTTGCGTAACCCGACTTGG‑GACGTTCATTATGCTTGGCA‑CCTATACGCTGGTTTACCTCCTGACCGTCTTCTTTTTGACCTTTAGGAccc                                             >  1:257854/1‑250 (MQ=255)
                                                                                                                                                                                                            gAGCGGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTTTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCTTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACTGTCTACTCTATGACCTTTAGGAccgccg                                          <  2:47546/251‑1 (MQ=255)
                                                                                                                                                                                                                         cGTGGGCCATTTATCTTCTCGGCGGGGCTGGTCATTA‑TCGGCCTGTATGTTGTCGTGTCGCTGCAT‑GAGGCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCTTAACCGTACTGGG‑TACATTCATTATGCT‑GGCAACCTATACTCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGACTGCGCGCCAGTTgg                             <  2:329120/251‑1 (MQ=255)
                                                                                                                                                                                                                                 aTTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGGGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAAAAGGTGAA‑GA‑TCCCGCTGGGGACGCTGCTG‑A‑CCAAAAATGTTCGCGTAAACGTACTGGG‑TACGGTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGcc                     >  1:126549/1‑251 (MQ=255)
                                                                                                                                                                                                                                   ttATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCt                    <  1:255413/250‑1 (MQ=255)
                                                                                                                                                                                                                                                   gCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGCCGCCGCAT‑GAGGAGCCGGTGTTGG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑CCCCGCTGGGTACGCTGTGG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTTTTTGACATCATGACGTTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAgtgt   <  2:182224/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    cTGGTCATTA‑TCGGCCTGTATGTTCGCGAGTCGCTGCAT‑GAGTCGTCGGTGTTTG‑AG‑AAAGTCAC‑TACAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑ACAAACATGTTCGCGAAACCGTCCTGGG‑TACGTTCTTTATGCT‑GGCCACCTCTAAGCTGTTTTATTTCCTGACGGTCTACTCTATTACCTTTAGTACCGCCGCCGCGCCCGTTGGGCTTGGCCTGCCGCGTAACGGAGtgtt  >  1:461555/1‑251 (MQ=255)
                                                                                                                                                                                                                                                      ggTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAGtgtt  <  1:193340/249‑1 (MQ=255)
                                                                                                                                                                                                                                                      ggTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAGtgtt  <  1:214487/249‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                  
GCTGCTGGCGCTGGCTCGATTTGGTCAGGGTCTGGGCTTAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTA‑TCGGCCTGTATGTTCGCGTGTCGCTGCAT‑GAGTCGCCGGTGTTTG‑AG‑AAAGTCGC‑TAAAGCG‑AAAAAACAGGTGAA‑GA‑TCCCGCTGGGTACGCTGCTG‑A‑CCAAACATGTTCGCGTAACCGTACTGGG‑TACGTTCATTATGCT‑GGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAGTGTT  >  NC_000913/3675163‑3675657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑