Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 536,617 Δ14,712 bp [glxR][ybcF] [glxR], ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, ylbE, ylbF, [ybcF]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 536617 551328 14712 52 [0] [0] 53 [glxR]–[ybcF] [glxR],ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,ylbE,ylbF,[ybcF]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 5366160 (0.000)52 (1.130) 45/484 0.1 100% coding (31/879 nt) glxR tartronate semialdehyde reductase 2
?NC_000913 551329 = 0 (0.000)coding (891/894 nt) ybcF putative carbamate kinase

ATCTCTTTAAGGTAATCGAAAATTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTAACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCTGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTATGGGTACACCGATGGCCATTAATCTGGCGCGTGCCGGTCATCAATTACATGTCACGACCATTGGACCGGTTGCTGATGAATTACTGTCACTGGGTGCCGTCAGTGTTGAAACTGCTCGCCAGGTAACGGAAGCATCGGACATCATTTTTATTATGGTGCCGGACACACCTCAGGTTGAAGAAGTTCTGTTCGGTGAAAATGGTTGTACCAAAGCCTCGCTGAAGGGCAAAACCATTGTTGATATG  >  NC_000913/536377‑536861
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
aTCTCTTTAAGGTAATCGAAAATTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtagg                                                                                                                                                                                                                                            >  1:368826‑M1/1‑240 (MQ=255)
aTCTCTTTAAGGTAATCGAAAATTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGAGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtagg                                                                                                                                                                                                                                            >  2:464512‑M1/1‑240 (MQ=255)
        aaGGTAATCGAAAATTCTGACGACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagac                                                                                                                                                                                                                                    <  2:347308‑M1/251‑20 (MQ=255)
                  aaaaTTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcct                                                                                                                                                                                                                          >  1:371037‑M1/1‑222 (MQ=255)
                    aaTTCTGACTACAACGGTTGGGTTGGGTGTGAATATACCCCCAAAAAAACAACGGAAGCCGCTTTACGCCGGATGGATCCGTACCGTTACAACGTGACGCTACTCAGACAATGCTATTTTAAGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctg                                                                                                                                                                                                                         >  1:412398‑M1/1‑220 (MQ=255)
                       tCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgc                                                                                                                                                                                                                     >  1:392740‑M1/1‑217 (MQ=255)
                          gACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcga                                                                                                                                                                                                                   <  1:464872‑M1/250‑37 (MQ=255)
                          gACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTAGTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTGAATTATGAAACTGGGATTTATTGGCTTGGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcga                                                                                                                                                                                                                   <  1:314184‑M1/250‑37 (MQ=255)
                                   ggttgggttgGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgc                                                                                                                                                                                                         >  1:17020‑M1/1‑205 (MQ=255)
                                    gttgggttggGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagac                                                                                                                                                                                                                                    <  1:340309‑M1/223‑20 (MQ=255)
                                    gttgggttggGTGTGAATATAAACCACAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagac                                                                                                                                                                                                                                    >  2:340309‑M1/1‑204 (MQ=255)
                                           tgggtGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatc                                                                                                                                                                                                 >  1:325205‑M1/1‑197 (MQ=255)
                                            gggtGTGAATCTAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatc                                                                                                                                                                                                 >  1:119466‑M1/1‑196 (MQ=255)
                                                      ataAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGAGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaa                                                                                                                                                                                       <  1:464512‑M1/250‑65 (MQ=255)
                                                                          gaatccggttTACGCTGTATGGATCCGTACCGTTAAAACGTGACGCTATTCATACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTGAGGCATTAgtagtcgtaggcattagtcattggtgcctgatgcgacgcttgacgcgtcttatcaggccaacaaccggtgccgcagccggcaatt                                                                                                                                                                  <  2:74695‑M1/247‑86 (MQ=255)
                                                                                           gatggatCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgat                                                                                                                                                 <  2:162160‑M1/251‑103 (MQ=255)
                                                                                            atggatCCGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAACTTTAAAAGCGGTTAATTATGAAACTGGAATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctccaaccggtgccgcatccggcaattggtgcacaatgcctgatg                                                                                                                                                >  1:232967‑M1/1‑148 (MQ=255)
                                                                                                  ccGTACCGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgc                                                                                                                                          >  1:372780‑M1/1‑142 (MQ=255)
                                                                                                    gTACCGTTAAAACGTGACGCTAGTCAGACAATGCTTTTTTAGGCCGCTAAGGTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAAGTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacattggtgcctgatgcgacgctttacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgctt                                                                                                                                        <  2:213627‑M1/251‑112 (MQ=255)
                                                                                                       ccGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgac                                                                                                                                     <  1:287611‑M1/251‑115 (MQ=255)
                                                                                                        cGTTAAAACGTGACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacg                                                                                                                                    <  2:119466‑M1/251‑116 (MQ=255)
                                                                                                            aaaaCGTGACGCTATTCAGACACTGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTTCGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgcagtcgtaggcattagacatttgtgcatgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatc                                                                                                                                >  1:422401‑M1/1‑132 (MQ=255)
                                                                                                                 gggacgcTATTCAGTAAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTGAATTATGAAACTGGGATTTATTGGCTTAGGCTTTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaagtggtgcacaatgcctgatgcgatgcttgtcgcatcttatc                                                                                                                           <  2:54537‑M1/248‑125 (MQ=255)
                                                                                                                    aCGCTATTAAGCCAATCCTTATTTAGGCCGCTAAGTTGGCAGGGGATCGCGTTGGCCGAATTCAGGAAACGCGAAATTTAACCGCGGTTACTTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgagacgcttgacgcgtcttatcaggactacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcggtgctggacgcctcttatccgg                                                                                                                        >  2:222712‑M1/1‑124 (MQ=255)
                                                                                                                              gACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgg                                                                                                              >  2:260494‑M1/1‑114 (MQ=255)
                                                                                                                                 aaTGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggt                                                                                                            >  1:375470‑M1/1‑111 (MQ=255)
                                                                                                                                       ttgttaggCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgccggatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccgga                                                                                                      <  2:368826‑M1/247‑146 (MQ=255)
                                                                                                                                         tttAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATGCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatc                                                                                                    <  2:371037‑M1/250‑148 (MQ=255)
                                                                                                                                              gCCGCTAAGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtagg                                                                                              >  1:162984‑M1/1‑98 (MQ=255)
                                                                                                                                                     aGTTGGCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggat                                                                                        >  1:151354‑M1/1‑91 (MQ=255)
                                                                                                                                                     aGTTGGCAGGGGATCGTGTTCTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGCTAATTATGATACTGGCGTTTATTGGCTTAGGCATTCgtagtcgaaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcaccatgcctgatgcgatgcttgacgcctcttagcaggcctacaatgggtaccggaacggtaggccggat                                                                                        >  2:171523‑M1/1‑91 (MQ=255)
                                                                                                                                                         ggCAGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggc                                                                                   <  1:267266‑M1/251‑165 (MQ=255)
                                                                                                                                                          gCAGGGGATCGTGTTGTCCGCATTCAGGAAAAGCGCCATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcg                                                                                  >  2:234233‑M1/1‑86 (MQ=255)
                                                                                                                                                            tgtggatcGTGTTGTCCGAATTAAGGCAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCAGTAgaagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctaccaccggcgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcccacaatgagtaccggatcggtaggccggataagacttt                                                                                >  2:60257‑M1/4‑84 (MQ=255)
                                                                                                                                                            aGGGGATCGTGTTGTCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtt                                                                                >  2:171740‑M1/1‑84 (MQ=255)
                                                                                                                                                                     tgttgtCCGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgc                                                                        >  2:158893‑M1/1‑75 (MQ=255)
                                                                                                                                                                         gtccgaattCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTCgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgaacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccg                                                                   >  1:304445‑M1/5‑71 (MQ=255)
                                                                                                                                                                            cgaATTCAGGAAAAGCTAAATTTAAAAGAGGTTAATTATGAAACGGGGATTTATTGGCTTAGGCATGAgtagtcgtaggcagtagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggca                                                                <  2:132621‑M1/250‑184 (MQ=255)
                                                                                                                                                                                ttCAGGAAAAGCGAAATTTACAGGAGGATAATTATGAAACTGGGCTTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtcggacggatacggcgtttacgccgaatccggacaga                                                             >  2:64281‑M1/1‑64 (MQ=255)
                                                                                                                                                                                        aaGCGAAATTTAAAAGAGGTTAATTCTGAAACTGGGATTTATTGGCTTCGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttaagccgcatccggcaagaataaagcac                                                    >  2:461970‑M1/1‑56 (MQ=255)
                                                                                                                                                                                                 ttAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcgtatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgc                                                                           <  1:445443‑M1/219‑173 (MQ=255)
                                                                                                                                                                                                 ttAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCAACAgtagtagtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcatacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggctaaggcgtttacgc                                                                           >  2:445443‑M1/1‑47 (MQ=255)
                                                                                                                                                                                                    aaaGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccga                                         >  1:451609‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                     acgaggtTAATTATGACACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatcaggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtatgccggaaaaggcgtttacgccgcatccggcaagaatagagcaccggttaaccgac                                        >  2:93351‑M1/3‑43 (MQ=255)
                                                                                                                                                                                                       gagGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccgaactt                                     >  1:448277‑M1/1‑41 (MQ=255)
                                                                                                                                                                                                          gTTAATTATGAAACTGGGATTTATTTGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaagtggtgcacaatgccggatgcgatgcttgacgcatcgtatcaggcctacaatgggtaccggatcggtaggccggataaggcggttacgccgcatccggcaagaatagagcaccagttaaccgaacttact                                  <  1:187053‑M1/251‑214 (MQ=255)
                                                                                                                                                                                                             aaTTATGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccgaacttactctg                               >  1:175804‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                 aTGAAACTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccgaacttactctgcgc                            <  2:232967‑M1/250‑220 (MQ=255)
                                                                                                                                                                                                                     aaCTGGGATTTATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagctaaccgaacttactctgcgcccaa                        >  1:62814‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                               tATTGGCTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccgaacttactctgcgcccaaatcacgccgct             >  1:393698‑M1/1‑17 (MQ=255)
                                                                                                                                                                                                                                     cTTAGGCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgccgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccgaacttactctgcgcccaaatcacgccgctggcct        >  1:441082‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                          gCATTAgtagtcgtaggcattagacatttgtgcctgatgcgacgcttgacgcgtcttatcaggcctacaaccggtgccgcatccggcaattggtgcacaatgcctgatgcgatgcttgacgcatcttatcaggcctacaatgggtaccggatcggtaggccggataaggcgtttacgccgcatccggcaagaatagagcaccagttaaccgaacttactctgcgcccaaatcacgccgctggcatattccg  <  1:234233‑M1/251‑246 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     
ATCTCTTTAAGGTAATCGAAAATTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAAAACGTAACGCTATTCAGACAATGCTTTTTTAGGCCGCTAAGTTGGCAGGGGATCGTGTTGTCTGAATTCAGGAAAAGCGAAATTTAAAAGAGGTTAATTATGAAACTGGGATTTATTGGCTTAGGCATTATGGGTACACCGATGGCCATTAATCTGGCGCGTGCCGGTCATCAATTACATGTCACGACCATTGGACCGGTTGCTGATGAATTACTGTCACTGGGTGCCGTCAGTGTTGAAACTGCTCGCCAGGTAACGGAAGCATCGGACATCATTTTTATTATGGTGCCGGACACACCTCAGGTTGAAGAAGTTCTGTTCGGTGAAAATGGTTGTACCAAAGCCTCGCTGAAGGGCAAAACCATTGTTGATATG  >  NC_000913/536377‑536861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: