| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,235,905 | 16376 bp→AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC | yjbE–malM | yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4235905 | 4252280 | 16376 | 31 [0] | [0] 34 | yjbE–malM | yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4235904 | 0 (0.000) | 27 (0.750) +AAGTAAAGGAAAACATCAACGTTCGCAAAAGAAAATGCCGATTTGCGGCCGC |
25/380 | 0.4 | 100% | intergenic (+497/‑2) | pgi/yjbE | glucose‑6‑phosphate isomerase/uncharacterized protein YjbE |
| ? | NC_000913 | 4252281 = | 0 (0.000) | intergenic (+1807/‑225) | malM/ubiC | maltose regulon periplasmic protein/chorismate lyase | |||||
TATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCA > NC_000913/4252034‑4252528 | gtttttattttaagtttatgatttttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaatgaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAg < 1:451339‑M2/4‑1 (MQ=255) ttttaagtttatgatttttattgttatttaaatataagttgaaacttctatttgatattcattacaattatcctaaaccgcgctcgctaattccccgagccgtaattcgcatgctttagttgtgtatactcgatcccgcccgcaatgtttttgggtaaatctccattcattcaatgaagggacattgtaagtaatggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAgg > 1:200311‑M2/241‑250 (MQ=255) tatgatttttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgtTAAGAAAAGGAAAACATCAc > 2:35620‑M2/232‑251 (MQ=255) tttattgttatttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattcccagcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCt > 2:154487‑M2/225‑251 (MQ=255) atttaaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTg > 1:160296‑M2/216‑251 (MQ=255) atttaaatataagttgaaacttatatttgatattcattccaaatctcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagctgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTg > 1:219161‑M2/216‑251 (MQ=255) aaatataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACAGTTCCTGGCATCCTGGACg > 1:99090‑M2/212‑251 (MQ=255) ataagttgaaacttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGa < 1:150962‑M2/44‑1 (MQ=255) cgatctttatatttgatattcattccaattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcGAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGccc < 1:97713‑M2/49‑1 (MQ=255) aattatcctaaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGc > 1:35449‑M2/176‑250 (MQ=255) tatcccagaactccatctctaattccccgcgccttaatacgcatgctgtagttgtgtatactcgatcccgcccgaaatgttttttggtaaatctccagtcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCCGGCAGCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATc < 2:270292‑M2/78‑1 (MQ=255) taaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCACCTACGGTTGCCCTCGCCCGCACGGGCatcggcaa > 2:90892‑M2/168‑247 (MQ=255) aaaacgccatcgctaattccccgcgccgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTaa < 2:347750‑M2/83‑1 (MQ=255) taattccccgcgccgtaattcgcatgctttagttgtgtatactcgatccagcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAAc > 1:276410‑M2/154‑251 (MQ=255) cgtaattcgcatgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCAc < 2:4448‑M2/111‑1 (MQ=255) catgctttagttgtgtatactcgatcccgcccgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCg > 1:117585‑M2/132‑250 (MQ=255) agttgtgtacagtagaccccgcccgaaatgtttttgggtaaatctccattccttcaatgaagggaaattataagtaaaggcaaacctcaacgtccgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGATTTCCCACTTCATGCGATTGTTGCg > 2:461459‑M2/124‑251 (MQ=255) cgcccgaaatgcttttgggtaaatctccattaattcaatgaagggcaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggcagcTAAGTAAAGGAAACCATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGttgcggttt > 2:272087‑M2/105‑243 (MQ=255) cgaaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACt < 2:172664‑M2/151‑1 (MQ=255) aaatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTa < 2:117585‑M2/153‑1 (MQ=255) aatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgacgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGGTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTa > 2:317915‑M2/98‑250 (MQ=255) aatgtttttgggtaaatctccattcattcaatgaagggaaattgtaagaaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAACGGAAAACATCACCGTTACTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTa > 1:90608‑M2/98‑250 (MQ=255) tgtttttgggtaaatctccattcattcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAAtt > 1:106807‑M2/96‑251 (MQ=255) ttgggtaaatctccattcattcaatgaagggaaattgtaagaaaaagcacacctcaacgttcgcaaacgaaaatgaccatatgcggccggTAAGTAAAGGACAACATCACCGTTCCTGGCCGCCTGGACGGAGATGCCCCTACGGCTGCCCTCGCCAGCACGGGCATCGGTAAAGCGAAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCtt > 1:466905‑M2/91‑251 (MQ=255) attcaatgaagggaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAacac > 1:419566‑M2/73‑251 (MQ=255) gaaattgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGAt > 1:169835‑M2/61‑250 (MQ=255) tgtaagtaaaggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTGAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAAt < 1:317915‑M2/195‑1 (MQ=255) aggaaaacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGt < 2:169835‑M2/205‑1 (MQ=255) aacatcaacgttcgcaaaagaaaatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGGGATGCCCCTACGGTTGCCCTCTCCAGCACGTGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTGTCTTTTGTGTGTCGTATTAGATCACTGAATTGGCTGTACATCTCCCGTAAACTCTTTTCGGCTATACAATGCCTTTACGTTATGt < 2:219161‑M2/210‑1 (MQ=255) aatgccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTcac < 1:91443‑M2/232‑1 (MQ=255) ccgatttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACTGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACGTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTGGCTGCGATGCAATTCCTGTACGTTATGTAACGGAGAGt < 1:337333‑M2/220‑1 (MQ=255) ccgatttgcggcagcTAAGTAACGGAAAACATACCCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGt > 2:337333‑M2/16‑235 (MQ=255) tttgcggccgcTAAGTAAAGGAAAACATCACCGTTCCTGGCATACTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGAACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTCCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCcgcg > 1:29453‑M2/12‑251 (MQ=255) gcTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCa > 2:96272‑M2/3‑250 (MQ=255) | TATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAAGTAAAGGAAAACATCACCGTTCCTGGCATCCTGGACGGTGATGCCCCTACGGTTGCCCTCGCCAGCACGGGCATCGGTAAAGCGTAAGGTTCAACATCGTTTTACCACTTCATGCGATTGTTGCGTTTTTGTTGCGTATTAGATCACTTAATTTGCTTTACATCTCCCGTAAACACTTTTCTGCGATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCA > NC_000913/4252034‑4252528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |