| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 119,396 | 0 | C | T | 35.4% | 66.5 / 18.9 | 48 | S39F (TCT→TTT) | ampE | protein AmpE |
| Reads supporting (aligned to +/- strand): ref base C (8/23); new base T (17/0); total (25/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GATTGCTATCCGGATATCGCTAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTCCCGG > NC_000913/119156‑119641 | gattgCTATCCGGATATCGCTAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTTTCTCgggggg > 1:170605/1‑248 (MQ=255) gCTAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTTTCTCGGGGGCACGTTAGGCCTGACCatt > 1:112792/1‑251 (MQ=255) tAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GGGAAACATTTTTTTTTCGG‑CGCCCCTTAGGCAttcacatttt > 2:434965/1‑242 (MQ=255) aaaaaCATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTTTTTCCGGCGCCCGTTTGGCATTTCCattatt > 2:118178/1‑251 (MQ=255) cATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGAt < 1:378328/251‑1 (MQ=255) ccGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGc < 2:170605/250‑1 (MQ=255) aCGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGc < 1:2566/251‑1 (MQ=255) ggCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTTTCTCGGGCGCACGTTAGGCATGACCATTATTTCGATGGGCGTg > 1:417304/1‑251 (MQ=255) cATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACt < 1:243031/251‑1 (MQ=255) cATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAAAATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGGTGGGGGTGACt > 1:422776/1‑251 (MQ=255) cATTGTGATAGTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTGTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACt < 2:145766/251‑1 (MQ=255) cATTGTGAGATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCGCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACt < 2:309282/251‑1 (MQ=255) ggATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTTTCTCGGGGGCCCGTTAGGCATGAACATTATTTCGATGGGCGTGACTTTTTTTTTGTTACgcgc > 1:449023/1‑251 (MQ=255) gATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGCGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACACCCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTTTCTCGGGGGCACGGTTGGCATGACCAATTTTGCGGTGGGCGTGGGTTTTTTACTGTTTCgcgc > 1:82793/1‑250 (MQ=255) aTCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTTTCTCGCGCGCCCCTTAGGCATGACCATTATTGCGATGGGCgggggcttttttttgtttctcgcct > 2:173759/1‑227 (MQ=255) aaaaCCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGGTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTAGTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAg < 1:295215/251‑1 (MQ=255) aaCCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTTTTACTCGTATTGCAggg < 1:114445/251‑1 (MQ=255) aTCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑GAACATTTTTTTCTCGGGGGCACGGTAGGCATGACCATTATTGCGGTGGGGGGGACTTTTTTTCTGTTTCGCGCATTGCAGGGAggtt > 1:136097/1‑248 (MQ=255) ggTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGGACGTTAGGCCTGACCATTATTGCGATGGGGGTGACTTTTTTACTGTTACGCGCATTGCAGGGGGTATTGttt > 1:178630/1‑250 (MQ=255) aTTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACAATTTTTTCTCGGGCGCACGTTAGGCATGACCATTATTTCGATGGGCGTGACTTTTTTACTGTTTCGCGCATTTCAGGGGGGATTGTTCCACGTTcc > 1:279763/1‑251 (MQ=255) ttGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTTTCTCGGGGGCACGTTAGGCATGACCCTTATTGCGGTGGGGGTGCCTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTcccc > 1:123230/1‑250 (MQ=255) aCGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAAACTTTTTTTCTTGGGCGCACGTTTGGCATGACCATTATTGCGATGGGCGCGACTTTTTTTCTTTTTCGCGCATTGCAGGGGGGATTGTTCAACGTTCCCACGC‑TACTggg > 1:171254/1‑250 (MQ=255) ggTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGgtgt < 1:109310/251‑1 (MQ=255) gttgcGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGtgtg < 2:337412/247‑1 (MQ=255) ttCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTgg < 2:68372/250‑1 (MQ=255) gtgtGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TGGAAAC‑TTTTTTTCTCGGGCGCCCGTTAGGCATGACCATTGTTTCGGTGGGCGTGACTTTTTTATTGTTTCGCGCCTTTCCGGGAGTTTTGTTCAACGttttcactccactggggtgggtgc > 2:59072/1‑229 (MQ=255) gTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTTTTTTGGGCGCAACTTAGGCCTCACCATTTTTTTTATGGGGGTGTCTTTTTTATTGTTACCCGCCTTTTACGGTGTTTTTTTCTACGTTCCCACGC‑CACTGGTTTTgctgctcttttgt > 2:265980/1‑244 (MQ=255) cAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCt < 1:118178/251‑1 (MQ=255) acaacaTGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTAtt < 2:422776/251‑1 (MQ=255) aTGACGCTATTTACAACCTTACTGGTGTTACTTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGGGTG‑AA‑CAATTTTCTCTTGGGCGGCCGTTAAGCATGGCCATTCATGCGATGGGGGGGACTTTTTTTCTGTTAAGCGCATTGTAGGGAGGCTTGTTGCACGTTCCCACGCCTA‑GCGTGTGGGTGCTGGTTGGGTTGCTGTGTGTTgggac > 2:224168/1‑248 (MQ=255) gACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTTTCTCGGGCGCCCGTTTGGCATGACCATTATTGCGGTGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGGGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGGTTTGTTTGCTGTGTATTTgcgc > 1:222408/1‑249 (MQ=255) aCGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCCCGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTTCGCGCATTTCAGGGGGGATTGTTCAACGTTCCCACGC‑TTCTGGTGTGGCTGCTGATTGGTTTGCTTTGTATTGgcgccgg > 1:309270/1‑248 (MQ=255) gtgtTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCa < 2:309270/251‑1 (MQ=255) gtTAATTTTCGAGCGCCTGTTTAAGGTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AATCATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGTGCTTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGTTGTGTATTGGCTCAGGTAAAGTTCGTCTTCATTATCAt < 1:394320/250‑1 (MQ=255) cGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTGTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGa < 2:310237/251‑1 (MQ=255) aGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACa < 2:171254/251‑1 (MQ=255) aaGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCCTGACCATTATTGCGATGGGCGGGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTTTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTTCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACg > 1:46080/1‑251 (MQ=255) gTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTa < 2:329901/251‑1 (MQ=255) gCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGccc < 1:154041/251‑1 (MQ=255) gCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑GAACAATTTTTTCTTGGGCGCAAGTTAGGCATTCCCCATATTGCGGTGGGCGTGGCTTTTTTTCTGTTACGCGCCTTGCCGGGGGTATTGTTCAACGTTCCCACGC‑TACTGGGGTGGCTGCTGATTGGGTTGCTGTGTATTGGCGCACGGAAAGTTCGGCTTCTTTATTCTTCTTATCTGTAAGCTGCTTCCCGTAAttttaagcatgtcc > 2:98319/1‑238 (MQ=255) tcatcGTCTTGAAGCGTTCTTTCGGCGGG‑GG‑AAACATTTTTTTCTCCGGCGCACGGTAGGCATGACCATTTTTGCGGTGGGCGTGACTTTTTTTATGTTACGCGCATTGCAGGGGGGATTGTTCAACGTTCCCCCGC‑TACTGGGGTGGCTGCTTATTGGTTTGCTGTGTATTGGGGCGGGTGAAGTTCGGCTTCCTTTTCCTGCTTTTCTGACAGATGCTTCCCGTCATTATAGcccggcccggtccccgg > 2:121812/1‑236 (MQ=255) tCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACAGTTGTCGCGCGGGCTCACGTGAGGCATGACCATGATTGCGATGGGCGTGACTTTTTTACTGTTACGCTCATTGCAGGGAGTATTGTTCAACGTTCCCGCGC‑TACTGGTTTGGCTGCTGATTGGTTGGCTGGGTAGTGGCGCAGGGAAAGGTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTACTGGTAGCCACACCAGTGCCACGAtggct < 2:82233/250‑1 (MQ=255) gg‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACg > 1:211128/1‑251 (MQ=255) g‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACgg > 1:143132/1‑251 (MQ=255) aaCATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTc < 2:449023/251‑1 (MQ=255) cATTTTTCTCTCGGGCGCACGGTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTccc < 1:265980/251‑1 (MQ=255) aTTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTCCCg > 1:61978/1‑251 (MQ=255) ttttCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTCCCgg < 1:140183/250‑1 (MQ=255) | GATTGCTATCCGGATATCGCTAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGG‑TG‑AAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGC‑TACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTCCCGG > NC_000913/119156‑119641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |