Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 577,688 IS3 (+) +3 bp coding (76‑78/498 nt) rrrD → lysozyme

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 316483NA (NA)38 (0.820) 36/488 0.3 100% noncoding (1255/1255 nt) IS3 repeat region
?NC_000913 577688 = 0 (0.000)coding (76/498 nt) rrrD lysozyme
* ? NC_000913 566777 =NA (NA)27 (0.580) 24/488 0.8 100% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 577690 0 (0.000)coding (78/498 nt) rrrD lysozyme

AGCAGGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAA  >  NC_000913/577445‑577935
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       
agcagGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCCGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatc                                                                                                                                                                                                                                                  <  1:185184‑M2/251‑6 (MQ=255)
agcagGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatt                                                                                                                                                                                                                                                  <  2:60437‑M2/251‑6 (MQ=255)
 gcagGTCGTGCCGGGGACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCAATtgatct                                                                                                                                                                                                                                                 <  2:307196‑M2/251‑7 (MQ=255)
                    ggTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggac                                                                                                                                                                                                                               <  1:18273‑M2/250‑25 (MQ=255)
                      ataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggataaAATGGCCCAAGGGGGAACGATGGTCTGGa                                                                                                                                                                                                                             >  2:306155‑M2/222‑250 (MQ=255)
                       taatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaaactcgcttaggcccgtgtccttattacggggggaggataaACTGGACCAAGGGGGAACGAGGGGCTGGa                                                                                                                                                                                                                             >  2:84289‑M2/221‑249 (MQ=255)
                            cctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGGGTc                                                                                                                                                                                                                      >  1:189193‑M2/216‑251 (MQ=255)
                              gctgctAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaag                                                                                                                                                                                                                    >  2:382438‑M2/1‑216 (MQ=255)
                                 gtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctccgtccggaaacatttgaaaacaagaacatcgcttatgcctgtgtccatattacgtgggtagggtccACTGTCCCAAGTGGTCACGATGGTCTGGAAGGTGTCCGctc                                                                                                                                                                                                                 >  2:168749‑M2/211‑250 (MQ=255)
                                 gctAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGGACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTAGTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagt                                                                                                                                                                                                                   >  2:175456‑M2/1‑213 (MQ=255)
                                  ctAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtg                                                                                                                                                                                                                  <  2:231911‑M2/249‑38 (MQ=255)
                                   ggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAca                                                                                                                                                                                                               <  1:254948‑M2/43‑1 (MQ=255)
                                   ggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataaggcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAc                                                                                                                                                                                                                <  2:42382‑M2/42‑1 (MQ=255)
                                    gaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTAcat                                                                                                                                                                                                              <  1:255840‑M2/44‑1 (MQ=255)
                                    aGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagt                                                                                                                                                                                                               >  2:367008‑M2/1‑210 (MQ=255)
                                          ttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgggtccctattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGGCAGCTAcataccat                                                                                                                                                                                                         >  1:322212‑M2/202‑250 (MQ=255)
                                                cattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatagcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAg                                                                                                                                                                                                   <  2:340523‑M2/55‑1 (MQ=255)
                                                     cacaGTGGGCCGCCATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGCCGTACCTGACCAACATTTATTTCAAGATTAAAGACGATACGCGAAAGGCTGCGAGAGGTGACTAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgaggctacgtgtgtagactctcagtacgaggg                                                                                                                                                                                             <  2:425819‑M2/251‑59 (MQ=255)
                                                                   gtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaagtatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACt                                                                                                                                                                               <  2:185578‑M2/75‑1 (MQ=255)
                                                                      tccatggagaacactttatcagccgggaactaatgcgggcaacggtgtttaattatatcgcatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacacgaacctcgcttaggcctgtgtccatcttacgtgggtagggtcaACTGGCCCCAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTgtt                                                                                                                                                                            >  2:152647‑M2/174‑250 (MQ=255)
                                                                        catggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATg                                                                                                                                                                          <  2:345139‑M2/80‑1 (MQ=255)
                                                                           gCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagt                                                                                                                                                                        >  1:231911‑M2/1‑171 (MQ=255)
                                                                                      tGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagta                                                                                                                                                             <  1:430883‑M2/250‑91 (MQ=255)
                                                                                                gaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtggggaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGGATGGCACGGACCCACCGGAAAAGacac                                                                                                                                                  >  2:9732‑M2/148‑250 (MQ=255)
                                                                                                     aatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGc                                                                                                                                             >  1:135727‑M2/143‑251 (MQ=255)
                                                                                                         gTACCTGACAAACCTTTATGTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcatccagtaaaaaaccccgtaaacagcat                                                                                                                                         >  2:218015‑M2/1‑141 (MQ=255)
                                                                                                          gggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGt                                                                                                                                        <  1:380806‑M2/114‑1 (MQ=255)
                                                                                                                        ttATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgctgctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttc                                                                                                                            >  1:346992‑M2/1‑126 (MQ=255)
                                                                                                                        aattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaaccatttgcaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTACCGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGGCTGTATGTCACGGACACACCGGAAACGACATTATGCTCGGTAACACGTAtacac                                                                                                                           >  2:307384‑M2/124‑248 (MQ=255)
                                                                                                                         attatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCaaa                                                                                                                         <  2:258189‑M2/129‑1 (MQ=255)
                                                                                                                             tCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacactcggctaagtgagtaaactctcagtcagatgtgactcacatgacaaaaacagtatcaaccattaaaaaaccccgtaaacagcattcgcctgaatttcgcagtg                                                                                                                      >  1:409871‑M2/1‑121 (MQ=255)
                                                                                                                             aatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAg                                                                                                                     <  2:319758‑M2/133‑1 (MQ=255)
                                                                                                                               aaGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcgtacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaag                                                                                                                   >  2:185184‑M2/1‑119 (MQ=255)
                                                                                                                                           acaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACTAAAGCAGAATGCAAAGCAct                                                                                                        <  1:152647‑M2/146‑1 (MQ=255)
                                                                                                                                             tAAGCGCAAGGATGCGAGAGGTGAATAACGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATAGCTGGCGGAGCAATTGATATAGCATAAGTGTTACTCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggggactcacatgaccaaaacagtatcaacaagtaaaaaacaccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgct                                                                                                     <  1:82964‑M2/251‑147 (MQ=255)
                                                                                                                                                cggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGaa                                                                                                  <  1:121599‑M2/152‑1 (MQ=255)
                                                                                                                                                cggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGaa                                                                                                  <  1:306155‑M2/152‑1 (MQ=255)
                                                                                                                                                   cAAGGCTGCGAGGGGTGAATAATGCCTCAATCATTACGCAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCACTTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgaagtgaagccctgaagcttgctgcacgc                                                                                               <  2:47681‑M2/251‑153 (MQ=255)
                                                                                                                                                   cAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgc                                                                                               <  1:183873‑M2/251‑153 (MQ=255)
                                                                                                                                                               agttggtgcggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCAc                                                                                   >  1:353013‑M2/85‑251 (MQ=255)
                                                                                                                                                                 gTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcgtgctgatcgcatcggtgttactgc                                                                                 >  1:376016‑M2/1‑85 (MQ=255)
                                                                                                                                                                          cggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGAc                                                                        <  1:461969‑M2/178‑1 (MQ=255)
                                                                                                                                                                           ggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCt                                                                                                                                                                                                                                <  2:47205‑M2/26‑1 (MQ=255)
                                                                                                                                                                           ggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCt                                                                                                                                                                                                                                >  1:47205‑M2/73‑98 (MQ=255)
                                                                                                                                                                                  caggatctctttttgcagccccacctattggtggcggagcaattgctataGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactca                                                                >  1:76774‑M2/25‑68 (MQ=255)
                                                                                                                                                                                    gtaCGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgagcttacccagcaataggggacacgcgtctaagtgagtaaactctcagtcagaggtgactcacatgacaaaatcagtatcagccagtaaaaaaccccgtaatcagcattcgccggaagttcgcagtgaagccctgaatcattctgaacgcatcggtgttactgccgcagcccgtgaactcagc                                                              >  1:414340‑M2/2‑66 (MQ=255)
                                                                                                                                                                                               cGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatc                                                   <  2:255016‑M2/251‑197 (MQ=255)
                                                                                                                                                                                                gaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATGCAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGt                                                  <  1:327379‑M2/200‑1 (MQ=255)
                                                                                                                                                                                                  aaacaagaacctcgcgtaggcctgggtccatattgcgtgtgtaggatcaACTGGCCCAAGTGGTAACGATTGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAACGCACCCTTGAATAAATCCCTTGCCGCTGTCGCCAGACAAATTAACCCGTATATCAAAGTCg                                                <  2:31342‑M2/202‑1 (MQ=255)
                                                                                                                                                                                                       agaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTACCGATGGTCTGGAAGGAGTCAGCTCCATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGatat                                            >  1:298081‑M2/45‑250 (MQ=255)
                                                                                                                                                                                                       agaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGAtata                                           <  1:397339‑M2/207‑1 (MQ=255)
                                                                                                                                                                                                            aTTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcagctaagtgagtcaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactataacac                                      <  2:398712‑M2/251‑210 (MQ=255)
                                                                                                                                                                                                                gtggCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggc                                  >  1:125599‑M2/1‑38 (MQ=255)
                                                                                                                                                                                                                   aggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACATCGGAAAAGACATCATGCTCGGTAAAACGTGTTCCAAAGCAGAATGCAAAGCACTCTTTAATAAAGGCCTTGCCACTTTCGCCATACAAATTAACCCGTATATCAAAGTCGATATACCGGAaacaac                                <  1:428149‑M2/218‑1 (MQ=255)
                                                                                                                                                                                                                   aggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAAcg                               >  1:88213‑M2/33‑251 (MQ=255)
                                                                                                                                                                                                                    ggcctgtgtccatattacgtgggtaggatcaACTGGCCCACGTGGTAACGATGGTCTGGAAGGTGTCGGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGcc                                                                            >  1:33287‑M2/32‑205 (MQ=255)
                                                                                                                                                                                                                    ggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCAGACAAAGATATTGTTGGTGTAGGGACTGTATGTCACGGACACACCGGAAAAGACATCAGGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAAGAAAGTCCTTGCCACTGTCGcc                                                                            <  2:33287‑M2/174‑1 (MQ=255)
                                                                                                                                                                                                                      cctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAAcgcgc                            <  2:117832‑M2/222‑1 (MQ=255)
                                                                                                                                                                                                                           gtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATCTACCGGAAACAACGCGCGgcgc                       >  2:172878‑M2/25‑251 (MQ=255)
                                                                                                                                                                                                                           aTTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaacgctacaactggcgcagtaaacag                       >  2:76494‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                              catattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAAGAAAGACCTGGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGctct                    <  1:466263‑M2/230‑1 (MQ=255)
                                                                                                                                                                                                                               atattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCtt                   <  1:9732‑M2/231‑1 (MQ=255)
                                                                                                                                                                                                                               atattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGGCGCCAGACAAATTAACCCGTATATCAAAGTCGATATTCCGGAAACAACGCGCGGCGCTCtt                   <  2:212035‑M2/231‑1 (MQ=255)
                                                                                                                                                                                                                                      aTCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaacagcaaaatcagc             <  1:245021‑M2/250‑235 (MQ=255)
                                                                                                                                                                                                                                                aTCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaaacagcaaaatcagcagacgtcttct  >  1:60437‑M2/1‑6 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       
AGCAGGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAA  >  NC_000913/577445‑577935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.