Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,016,437	Δ2 bp :: IS186 (–) +8 bp :: Δ1 bp	coding (570‑577/687 nt)	fliH →	flagellar biosynthesis protein FliH

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2016437 =	1 (0.020)	46 (1.010)	46/482	0.1	97.8%	coding (570/687 nt)	fliH	flagellar biosynthesis protein FliH
	?	NC_000913	2514274 =	NA (NA)					noncoding (2/1345 nt)	IS186	repeat region
*	?	NC_000913	= 2016444	1 (0.020)	62 (1.350)	58/484	0.0	98.4%	coding (577/687 nt)	fliH	flagellar biosynthesis protein FliH
	?	NC_000913	= 2515615	NA (NA)					noncoding (1343/1345 nt)	IS186	repeat region

CCGGTGGCTTCCAGCACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2016681‑2016437 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCAT  >  NC_000913/2514274‑2514517                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGGTGGCTTCCAGCACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCAT                                                                                                                                                                                                                                                 <  1:57669/250‑1  cggtgccgTCCAGCACCAGCCAGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACGGCGCCATTTTGGCTTCAAAGTTATCCAGCGTTGTTAGCCAGCGAGGCAGGCGCGTGGTCATTACACCACTCCTGGGTCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACGGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACATCCTCCAGGATTGAGTGTGGGATCGCCCATAA                                                                                                                                                                                                                                               <  2:466366/243‑1       GCTTCCAGCACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCT                                                                                                                                                                                                                                          <  2:416578/251‑1                   AGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTT                                                                                                                                                                                                                              <  2:343735/251‑1                     CCCGGTAGCGCGGGTTAATCGCCCGAAGCGCCGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCATGATGGAGGGGGGGATCGCCCATAAGCGCTAGCTTTAGGGTTGT                                                                                                                                                                                                                            <  2:26406/251‑1                        GGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGGTCGCCCATAAGCGCTCAATTAAGGGGTGTGGg                                                                                                                                                                                                                         >  2:174911/1‑250                           AGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGGTGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATT                                                                                                                                                                                                                      <  1:194116/251‑1                                GGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCC                                                                                                                                                                                                                 >  1:69066/1‑251                                     AATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATA                                                                                                                                                                                                            <  1:39895/251‑1                                      ATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATAT                                                                                                                                                                                                           <  2:272725/251‑1                                           CCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTT                                                                                                                                                                                                      <  2:69066/251‑1                                            cgtagctgCGTACCGCAGGCACCTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCTTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGTGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTA                                                                                                                                                                                                     <  2:357547/243‑1                                                  GACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACCGCCGCCAGGGTGGGGGGGGGGGTAGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTCTGCCTGATATGATTTAAAGTGC                                                                                                                                                                                               >  2:354355/1‑251                                                               CAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCATGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGGCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCATGATGGAGGGTGGGATCGTCCATAAGCGCTAACTTAAGTGTTGTGGTAGTACGCCTGATATGATTTAACGTGCCGATGAATTACTC                                                                                                                                                                                  <  1:456823/251‑1                                                                      GCCATTTGGGCTTCAAACTGATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACTCCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACGGTACAGCCGCCAGGATGTAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTAGTAGTACGCCGGATATGATTTAACGTGCCGATGAATTACTCTCACGAT                                                                                                                                                                           <  1:282612/251‑1                                                                        CATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATA                                                                                                                                                                          >  1:258763/1‑250                                                                               GCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACCGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTCTTACGGCTGATATGATTTAACGTGCCGCTGAATTACTCTCACGATAACTGGTC                                                                                                                                                                   >  1:56434/1‑250                                                                                            CCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGCGACTTTAAAGGCGCCAGGGTGGAGGGTGGGATCGCCCATAAGCGCTAAATTAAGGGTTGTGGTATTACGCCTGATATGATTTTACGTGCCGATGAATTACTCTCCCGATAACTGGTTATCACTTCTGGCCC                                                                                                                                                     >  2:352808/1‑251                                                                                             CAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGGTATGATTTAACGTGCCGCTGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCC                                                                                                                                                     >  1:152420/1‑250                                                                                               GCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATA                                                                                                                                                  <  1:86835/251‑1                                                                                                         CCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGCTATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCC                                                                                                                                        >  1:125156/1‑251                                                                                                          CAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCC                                                                                                                                       >  1:353825/1‑251                                                                                                           AGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCG                                                                                                                                      <  1:285944/251‑1                                                                                                                         GTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACT                                                                                                                        >  1:154750/1‑251                                                                                                                           GGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTT                                                                                                                       <  2:12320/250‑1                                                                                                                             TCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGGGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGG                                                                                                                    >  1:361437/1‑251                                                                                                                              CATTACCCCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTTCTCTCACGATAACTGGTCAGCAAGTCTGGCCCTTATTGGTAAGCCCGAAGAACTGGATACTTCGGC                                                                                                                   <  1:192491/251‑1                                                                                                                                     CCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCTAAGAACTGGATACTTCGGCACGTAAT                                                                                                            <  1:351904/251‑1                                                                                                                                                                   CTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGACAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGAGAAATT                                                                              >  1:178112/1‑251                                                                                                                                                                              GTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGCGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCCCTAACCCGCCGCCGCGAAATTCGTGGTGCTGC                                                                   >  2:255496/1‑251                                                                                                                                                                                  CGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACT                                                               >  1:103404/1‑251                                                                                                                                                                                   GACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCCGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTC                                                              >  1:170528/1‑251                                                                                                                                                                                            GTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTC                                                     >  2:96288/1‑251                                                                                                                                                                                               GAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGG                                                  <  2:258763/251‑1                                                                                                                                                                                                AGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGGGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCATGATATGATTTAACGTGCCGATGAATTACTTTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGGTACTTCGGCACGTAATGCCGGGGCTCTAAACCGCCGCCGCGCAATTCGTGATGCTGCAACTCTGCTACGTCTGGG                                                 >  2:66078/1‑251                                                                                                                                                                                                  ATCGCCTTCATCGGCGGAGACGTTACAGCCGCCAGGATGGAGGGTGGGATCGACCATAAGCGCTAACTTAAGGGTTGGGGTATTACGCCTGTTATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCCTATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGGAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGCTGCGGCAACTCTGCTACGTCTTGGGC                                               >  1:458120/1‑251                                                                                                                                                                                                    CGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCT                                              <  1:3320/250‑1                                                                                                                                                                                                         TCATCGGGGGGGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTT                                         <  2:410636/250‑1                                                                                                                                                                                                               GCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCC                                  >  1:377542/1‑251                                                                                                                                                                                                                    GACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGG                             <  2:353825/251‑1                                                                                                                                                                                                                     ACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGG                            >  1:79414/1‑251                                                                                                                                                                                                                           CAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTC                      <  1:352808/251‑1                                                                                                                                                                                                                            AGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTC                      >  2:358269/1‑250                                                                                                                                                                                                                              CCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGGGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATGCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATT                   <  2:79414/251‑1                                                                                                                                                                                                                                       gGGAGGGTGGGACCGCCCATATGCGCTAAATTAAGGGTTGTGGTATTACGCGTGATATGATTTAACGTGCCGATGAATGACTCTCACGATAACTGGTCAGCAATTCTGGCCCATAGTGGTAAGCCCGAAGAACGGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGT          <  2:361437/250‑1                                                                                                                                                                                                                                               GGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAGGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCGTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCAT  <  1:271838/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGGTGGCTTCCAGCACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2016681‑2016437 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCAT  >  NC_000913/2514274‑2514517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.