Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 577,688 IS3 (+) +3 bp coding (76‑78/498 nt) rrrD → lysozyme

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 316483NA (NA)37 (1.090) 36/486 0.1 100% noncoding (1255/1255 nt) IS3 repeat region
?NC_000913 577688 = 0 (0.000)coding (76/498 nt) rrrD lysozyme
* ? NC_000913 566777 =NA (NA)14 (0.410) 13/486 1.2 100% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 577690 0 (0.000)coding (78/498 nt) rrrD lysozyme

CAGCAGGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAACGT  >  NC_000913/577444‑577938
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        
cagcagGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgat                                                                                                                                                                                                                                                      <  1:123487‑M2/251‑5 (MQ=255)
    gcaaaaggttgctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAg                                                                                                                                                                                                                                                  <  2:254947‑M2/11‑1 (MQ=255)
        aaggttgctgcgacgataatgccggagtggaaagcttcttgcattcgctgaaagtggaaggtatccatggagaacgcgttagcagccgggaaataatgcgggcaacggggtttaatgagatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggccacagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatatgacgtgggtaggatcaGCTGGCGCAAGTGGt                                                                                                                                                                                                                                              <  2:293563‑M2/15‑1 (MQ=255)
              gctgctacgataatgcctgcgtggaaagcttctttcattcgctgaaagtggaatgtatccatggagaacacttgatcagccgggaaataatgcgggcgacggtgttgaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcgtcctcagtccggaacaattggaaatcaggagcctcgcttaggcctgtgtcgttaagacgtgggtaggatcaACTGGCCCAAGTGGTAACGAt                                                                                                                                                                                                                                        <  1:28453‑M2/21‑1 (MQ=255)
                                            tctttcattcgcggaaagtggaatgtatccatggagaacactgtatcagccgggaaataaggcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttagtctggtttccatattacgtgggtaggataaACTGGCCCAAGTGGTAACGATAGTCGGGAAGGTGTCAGCTAcataccat                                                                                                                                                                                                            <  2:224969‑M2/49‑1 (MQ=255)
                                               aCTCCCGCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagt                                                                                                                                                                                                       >  2:30881‑M2/1‑200 (MQ=255)
                                                 cattcgctgaaagtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGa                                                                                                                                                                                                     <  1:18845‑M2/56‑1 (MQ=255)
                                                           aagtggaatgtatccatggagaactctttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcatagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATTCCATACAAAGATATTGTTGgt                                                                                                                                                                                           <  1:249319‑M2/66‑1 (MQ=255)
                                                            agtggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGgtg                                                                                                                                                                                          >  1:206058‑M2/185‑251 (MQ=255)
                                                              gcagcaATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcaca                                                                                                                                                                                        >  2:252964‑M2/1‑185 (MQ=255)
                                                               ggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTa                                                                                                                                                                                        <  1:219008‑M2/69‑1 (MQ=255)
                                                               ggaatgtatccatggagaacactttatcagccgggaaataatgcgggcaacggagtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggagtggcggcctcagtccggcacaatttgaaaacaagaacctcgcttaggcctgtggccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGAGGGTCTGGAAGGGGTCAGCCTCATACCATACAAAGATATTGttggtggat                                                                                                                                                                                       >  2:121837‑M2/182‑248 (MQ=255)
                                                                         catggagaacactttatcagccgggaaataatgcgggccacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaaccccgcttaggcctgtgtccatattaagtgggtaggatcaACCGGCCCCAGGGGTAACGATGGTCTGGAAGGGGTCAGCTACACACCATACCAAGATATTGTTGGGGGATGGACTGTATg                                                                                                                                                                             >  1:231852‑M2/172‑251 (MQ=255)
                                                                           tggagaacactttatcagccgggaaataatgcgggcaccggtgtttaattatatcgaatgtgattccaatcggtggcggcggcacagttggtgtggcggcctccgtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccctattacgtgggtaggatcaACTGGCCCAAGCGGTCACGATGGTCTGGAAGGTGTCAGCTACCTACCCTACAAAGATATTGTTGGTGTATGGACTGTATGTc                                                                                                                                                                           >  1:204320‑M2/170‑251 (MQ=255)
                                                                            ggagaacactttatcagccgggaaataatgcggtcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTc                                                                                                                                                                           <  1:341338‑M2/82‑1 (MQ=255)
                                                                                                 gaaataatgcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGAcat                                                                                                                                                     >  1:144058‑M2/148‑251 (MQ=255)
                                                                                                  ctgctgACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGAGTTAATCAATtgatcttacccagaaatagtggacacgcggctaagtgagtaaactcccagtcagaggagactaacatgacaaaaacagtatcaacacgtaacaaaccccgt                                                                                                                                                     <  2:277818‑M2/250‑102 (MQ=255)
                                                                                                         gcgggcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCg                                                                                                                                             >  1:29848‑M2/140‑251 (MQ=255)
                                                                                                            aCCTGACAAACCATTATTTCAAGAGTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGGTGCTGCTGCTAGTGGTGGCGGAGCAATTGCTATAGCAGCAGTGTTAATCACTtgatcttacccaccaatagtggacacgcggcgaagtgtgtaaaccctcagtcagaggtgtctcacttgacaaaaacagtaacaaccagtaaaaaaccccggaaacagcatt                                                                                                                                           >  2:308682‑M2/1‑139 (MQ=255)
                                                                                                             gcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTaa                                                                                                                                         <  1:204001‑M2/116‑1 (MQ=255)
                                                                                                             gcaacggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtcccgaacaagttgaaaacaagaacctctcctatgcctgtgtccatcttacctgggtaggatcaACTGGCCCCAGGGGTAACGATGGGCTGGAAGGGGTCAGCTACATACCATACAAAGAGAATGTTGGTGTATGGACTGTATGTCACGGACACACCGGCAAAGACATCCTGCTCGGTa                                                                                                                                          >  2:278637‑M2/136‑250 (MQ=255)
                                                                                                              cTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGAGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaacaagtaaaaaaccacgtaaacagcattcgc                                                                                                                                        <  1:47130‑M2/251‑115 (MQ=255)
                                                                                                                acggtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGgtaaatc                                                                                                                                      <  2:87748‑M2/119‑3 (MQ=255)
                                                                                                                   gtgtttaattatatcgaatgtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGt                                                                                                                                    >  1:250749‑M2/130‑250 (MQ=255)
                                                                                                                         ttATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATCATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgc                                                                                                                             <  2:203491‑M2/251‑126 (MQ=255)
                                                                                                                             ttCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtg                                                                                                                         <  1:101984‑M2/251‑130 (MQ=255)
                                                                                                                                  aatTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACGtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagcc                                                                                                                    >  2:256483‑M2/2‑117 (MQ=255)
                                                                                                                                      gtgattacaatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCaaa                                                                                                                <  1:286282‑M2/141‑1 (MQ=255)
                                                                                                                                          aagaTAAGCGCAATGCTGCGAGAGGTGAATAATGCCTCCATCATTACCAAAAGCCGTTGCTGCTGCTATTGGCGGCGGAGCAATTCCTATAGCATCAGTGTTAATCACTtgaacttacccagcaatagtggacacgcggctaagtgagcaaactctcagtcagaggtgcatcacatgacaaaaacagtatcacaccgtaacaacccccgtaaacagcattcgcctgaatttcgcagtgaagccctga                                                                                                                <  1:337669‑M2/247‑139 (MQ=255)
                                                                                                                                          aagaTAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaacagcattcgcctgaatttcgcagtgaagccctgaagct                                                                                                            <  1:3186‑M2/251‑143 (MQ=255)
                                                                                                                                             caatcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCActct                                                                                                         <  1:259976‑M2/148‑1 (MQ=255)
                                                                                                                                               agcggtggcggcggcacagttggtgttgcggcctcagtccggaacaattggaaaacaagatcctcgcttaggcctgtgtccagattacgtgggtaggatcgACTTGCCCAAGTGGTAACGATGGTCTGGGAGGTGTCAGCTACATACCGTGCAAAGATATGGTTGGTGTATGGACTTGATGTCACGGACACGCCGGAAAAGGCAGCATGGTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTg                                                                                                       <  1:163879‑M2/150‑1 (MQ=255)
                                                                                                                                                tcggtggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCCAAGCAGAATGCAAAGCACTCTTg                                                                                                       >  2:15453‑M2/101‑250 (MQ=255)
                                                                                                                                                     ggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATAtt                                                                                                                                                                                                 <  1:108682‑M2/60‑1 (MQ=255)
                                                                                                                                                     ggcggcggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtggggcggatcaACTGGCCCAAGTGGTAACGATGGTCTGGACGGTGTCAGCTACATACCCTACAAAGATAtt                                                                                                                                                                                                 >  2:108682‑M2/96‑155 (MQ=255)
                                                                                                                                                          cggcacagttggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGCTGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCt                                                                                            >  2:184643‑M2/91‑251 (MQ=255)
                                                                                                                                                             gagaGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTtgatcttacccagcaatagtggacacgcggctaagtgagtaaactctcagtcagaggtgactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaccagcattcgcctgaatttcgcagtgaagccctgaagcttgctgaacgcatcggtgtt                                                                                         <  2:17475‑M2/251‑162 (MQ=255)
                                                                                                                                                                 ggTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGAGGAGCAATTGCTATAGCATCAGTGTTCATCACTtgatcttaaccagcaatagcggacacgcggctcagtgcgtaaactctcagtcagaggagactcacatgaccaaaacagtatcaaccagtaaaaaacaccgtcaacagcattcgcctgaatttcgccgtgaagccctgaagcttgctgaccgcatcggtgttactg                                                                                     <  1:40164‑M2/251‑166 (MQ=255)
                                                                                                                                                                    ggtgtggcggcctcagtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTc                                                                                  <  2:11809‑M2/171‑1 (MQ=255)
                                                                                                                                                                    ggtgtggcggcctcagtccggaacaagttgaaaacaagaacctcgcttaggcctgtttccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAATATATTGTTGGTGTATGGACGGTAGGTCTCGGACACACCGGAAAAGACATCATGCTCAGTAAAACGTAGACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGt                                                                                   <  2:231852‑M2/170‑1 (MQ=255)
                                                                                                                                                                            ggcctcagtcaggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggaaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGGCGCCAGAc                                                                           >  2:48409‑M2/73‑250 (MQ=255)
                                                                                                                                                                                   gtccggaacaatttgaaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAAc                                                                   >  1:91776‑M2/66‑251 (MQ=255)
                                                                                                                                                                                         aacaatttgaaaacaagaacctcgcttaggcctgtggccatattccgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGtat                                                             <  2:194393‑M2/192‑1 (MQ=255)
                                                                                                                                                                                                  aaaacaagaacctcgcttaggcctgtgtccatattacgtgggtaggagcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCCCTGTCGCCAGACAAATTAACCCGTATATCAAAGTc                                                    <  2:49816‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                                         gCAATTGCTATAGCATCAGTGTTAATCACTtgatcttaccccacaatagtggacacgcggctaagtgagtaaactctcagtcagaggagactcacatgacaaaaacagtatcaaccagtaaaaaaccccgtaaccagcattcgcctgaatttcgccgtgaagccctgaagcttgctgaacgcatcggtgttactgccgcagcccgtgaactcagcctgtatgaatcacaactctacaactggcgcagtaa                              <  1:57704‑M2/250‑221 (MQ=255)
                                                                                                                                                                                                                                atattacgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCtt                      <  1:15453‑M2/231‑1 (MQ=255)
                                                                                                                                                                                                                                     acgtgggtaggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTc                 >  1:4730‑M2/16‑251 (MQ=255)
                                                                                                                                                                                                                                         gggtaggatcaACTGGACCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATGATGCTCGGTAAAACGTATGCCAATGCAGAATGCAAAGCACTCTTGAATAAAGCCCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAACTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTc             <  1:186035‑M2/240‑1 (MQ=255)
                                                                                                                                                                                                                                             aggatcaACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGtt          <  2:144058‑M2/243‑1 (MQ=255)
                                                                                                                                                                                                                                                  caACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAAc    <  2:246958‑M2/249‑1 (MQ=255)
                                                                                                                                                                                                                                                   aACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATAACATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATCCCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAACg   >  1:330916‑M2/2‑251 (MQ=255)
                                                                                                                                                                                                                                                    aCTGGCCCAAGTGGTAACGATGGTCTGGAAGGGGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAACGt  <  2:161173/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        
CAGCAGGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAACGT  >  NC_000913/577444‑577938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.