Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,016,437	Δ2 bp :: IS186 (–) +8 bp :: Δ1 bp	coding (570‑577/687 nt)	fliH →	flagellar biosynthesis protein FliH

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2016437 =	1 (0.030)	39 (1.170)	36/480	0.1	97.4%	coding (570/687 nt)	fliH	flagellar biosynthesis protein FliH
	?	NC_000913	2514274 =	NA (NA)					noncoding (2/1345 nt)	IS186	repeat region
*	?	NC_000913	= 2016444	1 (0.030)	47 (1.400)	44/482	0.0	97.9%	coding (577/687 nt)	fliH	flagellar biosynthesis protein FliH
	?	NC_000913	= 2515615	NA (NA)					noncoding (1343/1345 nt)	IS186	repeat region

CCAGCACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2016671‑2016437 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGG  >  NC_000913/2514274‑2514519                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cctGCACCGGCCCGGTAGCGCGGGTTAAGCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACGTTACAGCCGCCAGGATGGAGGGTGGTATCGCCCATAAGCGCTAACT                                                                                                                                                                                                                                        <  2:160402/248‑1      ACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGCGGGGGGGAGCGCCCATAAGAGCTAACTTAAGG                                                                                                                                                                                                                                   >  2:69804/1‑251           CCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCCGGGAGGAGGGTGGGGTACCCCCTAAGCGCTAACTTAAGGGctgg                                                                                                                                                                                                                              >  2:14230/1‑247              GGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGT                                                                                                                                                                                                                           >  1:254578/1‑251                 AGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATT                                                                                                                                                                                                                        <  1:206102/251‑1                              CGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATG                                                                                                                                                                                                            <  1:69914/250‑1                                     AGCGACGTACCGCAGGCAACTGCGCCAGGTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCTCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAC                                                                                                                                                                                                     <  2:62059/250‑1                                      GCGACGTCCCGCAGGCAACTGCGCCATATTGGCTTCAAAGTTCTCCAGCGTGGTTCGCCAGCGAGTCAGGCGCGTGGACATTACACCACCACTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGCTGGCGGGGGGGATCGCCCATAAGCGCCAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGT                                                                                                                                                                                                   >  2:147383/1‑251                                            TACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTTCAGCCGCCCGGATGGAGGGGGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGCATTACGCCCGATATGAATTAACGTGCCGc                                                                                                                                                                                              >  2:283028/1‑249                                                          GCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAC                                                                                                                                                                                <  1:211579/250‑1                                                            GCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGAT                                                                                                                                                                             <  1:33342/251‑1                                                              CATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGGGCCGATGAATTACTCTCACGATAA                                                                                                                                                                           <  2:116644/251‑1                                                                         CAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCA                                                                                                                                                                 <  2:136315/250‑1                                                                               TATCCAACGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCTCTAACTTAAGGGTTGTGGGATTACGCCTGAGATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTG                                                                                                                                                           <  1:26759/250‑1                                                                                  CCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCC                                                                                                                                                        <  1:92569/250‑1                                                                                             AGCCAGCGAGTCAGGCGCGAGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGCAGGAGGGTGGGATAGCCCATCAGCGCTAACCTAAGGGTTTTGGTATTACGCCGGGTATGATTTAACGTGTCGCTGAATTAACCTCACGATAACTGGTCAGCAATTtcggcacataatggcaat                                                                                                                                            >  2:17695/1‑233                                                                                                 AGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGCTGGAGGGGGGGCTCGCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGATATGATTTAACGTGCCGCTGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCActttgtgaatcccg                                                                                                                                        >  2:97506/1‑237                                                                                                 AGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCG                                                                                                                                        >  1:105516/1‑251                                                                                                        CAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGACGCCAGGCTGGAGGGTGGGACCGCCCCTAAGCTCTAACTTAAGGGTTGGGGCATTACGCCTGGTATGATTTAACGTGGCGATGAATTACTCTCACGATAACTGGTAAGCAATTCCGTGCCATATTGGTAAGCCCtaacaacc                                                                                                                                 >  2:278715/1‑243                                                                                                              CGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATAC                                                                                                                           >  1:296792/1‑251                                                                                                                       TACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGGATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACG                                                                                                                  >  1:304896/1‑251                                                                                                                       TACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGAGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGGTGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAAATGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACG                                                                                                                  >  1:147968/1‑251                                                                                                                           CCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGCAGAACTGGATACTTCGGCACGTAA                                                                                                               >  2:179227/1‑250                                                                                                                                   GGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGC                                                                                                      <  1:121734/251‑1                                                                                                                                         GCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAAC                                                                                                >  1:148139/1‑251                                                                                                                                                 gcgggggtctgGCCAGGGAGTGGCGACACGGGCGGCGAGGTCGCCTTCAGCGGCGGTGTCTTTACAGCCGCCGGGATGGAGGGTGGGATCGCACATAAGCGCTAGCTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCAGATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCC                                                                                        <  2:1983/240‑1                                                                                                                                                 GCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCC                                                                                        <  1:14230/251‑1                                                                                                                                                 GCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGGGGGATCGCCCCTAAGCGCTAACTTAAGGGATGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGACCTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCC                                                                                        >  2:205474/1‑251                                                                                                                                                   AGAGTTCTTGCCAGCGGGTGGCGACACGGGGGGCGAGATCGCCTTCACCGGCGGAGACTTTACAGCCGCCGGGATGGAGGGTGGGAGCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAGGAATTACTCTCACGATAACTGGTCAGCAATGCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAAACCGCCGCCGC                                                                                      <  2:340918/251‑1                                                                                                                                                         CTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACGCCTGGTATGATTTAACGTGCCGAAGAATTAATCTCACGATAAATGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCCCGGAATGCCGGGGCTCTAAACCGCCGCCCCGAAATT                                                                                >  2:278525/1‑251                                                                                                                                                           TGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTC                                                                               <  2:254578/250‑1                                                                                                                                                                    ggGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGC                                                                     <  2:200850/249‑1                                                                                                                                                                      GGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCCGGATGGAGGGGGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGGAATGCCGGGGGTCTAACCCGCCGCCG                                                                                       >  2:94472/1‑231                                                                                                                                                                      GGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCG                                                                                       <  1:94472/231‑1                                                                                                                                                                                                                 CAGCCGCCAGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTC                        >  2:287428/1‑251                                                                                                                                                                                                                         AGGATGGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCAGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTG                >  1:216992/1‑251                                                                                                                                                                                                                              GGAGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTC           <  1:313206/251‑1                                                                                                                                                                                                                                AGGGTGGGATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCAC         <  1:97506/251‑1                                                                                                                                                                                                                                       GATCGCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGG  <  1:54608/251‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCAGCACCAGCCCGGTAGCGCGGGTTAATCGCCCGTAGCGACGTACCGCAGGCAACTGCGCCATTTTGGCTTCAAAGTTATCCAGCGTGGTTAGCCAGCGAGTCAGGCGCGTGGTCATTACACCACTCCTGGTGCTGCCAGACGGCAGAGTTCTTGCCAGCGAGTGGCGACACTGGCGTCGAGATCGCCTTCATCGGCGGAGACTTTACAGCCGCCAGGATGGAGGGTGGGATCGccc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2016671‑2016437 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGG  >  NC_000913/2514274‑2514519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.