Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,235,905 Δ16,377 bp yjbEmalM yjbE, yjbF, yjbG, yjbH, yjbT, psiE, xylE, malH, malG, malF, malE, malK, lamB, malM

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4235905 4252281 16377 44 [0] [0] 45 yjbE–malM yjbE,yjbF,yjbG,yjbH,yjbT,psiE,xylE,malH,malG,malF,malE,malK,lamB,malM

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42359040 (0.000)44 (0.850) 42/486 0.3 100% intergenic (+497/‑2) pgi/yjbE glucose‑6‑phosphate isomerase/uncharacterized protein YjbE
?NC_000913 4252282 = 0 (0.000)intergenic (+1808/‑224) malM/ubiC maltose regulon periplasmic protein/chorismate lyase

AATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAAT  >  NC_000913/4235657‑4236149
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
aaTAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTa                                                                                                                                                                                                                                                      >  1:438955‑M1/1‑248 (MQ=255)
 aTAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagt                                                                                                                                                                                                                                                   <  1:468281‑M1/251‑5 (MQ=255)
              cGTTGTTTATTTCGGAAAATACGCAGATTAATTGCGTTTGTTTTTATTTTAAGTTTATGATTTGTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATAGTCATTCCAATTATCCTAAAACTCCATCGCTAATTCCCCGCGCCGTAAGTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacat                                                                                                                                                                                                                                       <  2:457589‑M1/250‑17 (MQ=255)
                     tATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgtt                                                                                                                                                                                                                                <  1:356901‑M1/250‑24 (MQ=255)
                           ggAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCTAATTATCTTAAAACGCCATCGCTAATTCGACGTGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTACATCTTCATTCATTCAATGAAGGGAATTTGTaagtaaaggaaaacatcaccgttcctgga                                                                                                                                                                                                                          >  2:1241‑M1/1‑221 (MQ=255)
                                         ttAATTGCTTTTGTTTTTATTTTCAGTTTATGATTTTAATTGATATTTACATATAAGTTGAAAATTATATTTGATCTTCATTACAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGCGTATACTCGATCCCGCCCGACATGTCTTTGGGTAAATCTCAATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgat                                                                                                                                                                                                           >  1:231335‑M1/1‑207 (MQ=255)
                                                          tattttaAGTTTATGATTTTTATTGTTATTTACATGTAAGTTGAATCTTATATTTGCTATTCATTCCAATTATCCTACAACGCCATCTCTAATTCCACGCGCCGTAATTCGCATGCTTTAGTTGAGTATACTCTATCCCGCCCGAAATGTTTTTGGGTACATCTCCATTCATGCAATGAAGGGAAATTGTacgtagaggaaaacatcaccgttcttcgcatcctggacggtgttgcccctacggtcaccct                                                                                                                                                                                          >  2:289358‑M1/1‑190 (MQ=255)
                                                                                  gTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagc                                                                                                                                                                  >  2:164350‑M1/1‑166 (MQ=255)
                                                                                           atatAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttc                                                                                                                                                         <  2:187608‑M1/251‑95 (MQ=255)
                                                                                               aaGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaaca                                                                                                                                                     <  1:318241‑M1/251‑99 (MQ=255)
                                                                                                           atatTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccac                                                                                                                                         >  2:111506‑M1/1‑141 (MQ=255)
                                                                                                                    attcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaagattcaacatcgttttaccacttcatgcg                                                                                                                                 <  1:431035‑M1/250‑119 (MQ=255)
                                                                                                                        attcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcc                                                                                                                                                                                                                      <  2:266459‑M1/161‑34 (MQ=255)
                                                                                                                        attcCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcc                                                                                                                                                                                                                      >  1:266459‑M1/1‑128 (MQ=255)
                                                                                                                           ccAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgg                                                                                                                         >  2:342946‑M1/1‑125 (MQ=255)
                                                                                                                                    cTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtgtttgtt                                                                                                                >  2:301937‑M1/1‑116 (MQ=255)
                                                                                                                                     tAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCAAGCTTTAGTTGTGTATACTCGATCACGCCCGAATTGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAACTTGTaagtaaaggaaaacatcaccgttcctggcatcatggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttg                                                                                                               >  1:478110‑M1/1‑115 (MQ=255)
                                                                                                                                      aaaaCGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgtt                                                                                                                <  2:499366‑M1/249‑136 (MQ=255)
                                                                                                                                            ccATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtatt                                                                                                         >  2:526630‑M1/1‑108 (MQ=255)
                                                                                                                                              aTCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtatt                                                                                                         >  1:275407‑M1/1‑106 (MQ=255)
                                                                                                                                                cGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagat                                                                                                     <  1:307135‑M1/250‑147 (MQ=255)
                                                                                                                                                 gCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatca                                                                                                   <  1:164350‑M1/251‑149 (MQ=255)
                                                                                                                                                       tCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCACGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggccggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaat                                                                                             >  1:505021‑M1/1‑97 (MQ=255)
                                                                                                                                                        ccccGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatt                                                                                            >  2:182229‑M1/1‑96 (MQ=255)
                                                                                                                                                             cgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctt                                                                                       >  2:314760‑M1/1‑91 (MQ=255)
                                                                                                                                                                cGTAATTCTCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttggaccacgtcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttac                                                                                    <  2:72057‑M1/251‑164 (MQ=255)
                                                                                                                                                                       cGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgcccgcgccagcacgggcatcggtaaagcgtaatgttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctccc                                                                             <  2:327226‑M1/251‑171 (MQ=255)
                                                                                                                                                                               ttAGTTGTGTATACTCGATCACGCCCGAAATGTTTTTGGGTAACTCTCCATACATTCAATGAAGGGAAATTGTaagtacaggaaaacatccccgttcctggcatcctggacggtgatgaccctacggttgcactcgccagcacgggcatcggtaacgcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacac                                                                     >  2:356395‑M1/1‑73 (MQ=255)
                                                                                                                                                                                          taCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTcagtaaaggaaaacatcaacgttactgccatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgat                                                          >  1:246762‑M1/1‑62 (MQ=255)
                                                                                                                                                                                                aTCCCGCCCGAAATGTTTTTGGGAAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcatggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatg                                                    >  2:453814‑M1/1‑56 (MQ=255)
                                                                                                                                                                                                                     ggTAAATCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcccttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgctatgtaacgg                                 >  2:293578‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                         aaTCTCCATTCATTCAATGAAGGGAACTTGTaagtcaaggaaaccctcaccgttcctggcatcctggacggtgatgcccctccggttgccctcgccagcacgggcatcggtaaagcgtaagtttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtcttagatcacttcatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaac                                   >  2:220162‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                         aaTCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgtgttaccacttcatgcgattgttgcgtttttgttgcgtattagagcacttaatttgcttgacagctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaac                                   <  1:220162‑M1/243‑213 (MQ=255)
                                                                                                                                                                                                                          aTCTCCATTCATTCCATGAAGGGAAATTGTaagcaaaggaaaccatccccgttcctgccatcctggccggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttactgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtacacacttttctgcgatacaatgcctttacgttatgtaacggagcgttc                          >  2:227823‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                          aTCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaac                                   <  1:251742‑M1/242‑213 (MQ=255)
                                                                                                                                                                                                                          aTCTCCATTCATTCAATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaac                                   >  2:251742‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                                  tcattcaATGACGGGCAATTGTaagtacaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaacggagagttcggaatgtc                  >  2:472853‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                     ttcaATGACGAGAAATCGTcagtaaaggaaaacatcaccgttcctggcatcctggaaggtgctgcacctacggttgccctcgccagcacgggcatcggtaaagcgtaaggatcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattcgatcacttaattttctttacatctcccgtaaacacttttctgagatacaatccctttacgttctgtagcggagatttcggctagccac                >  2:451181‑M1/1‑19 (MQ=255)
                                                                                                                                                                                                                                       caATGAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgttttggttgcgtattagatcacttaatttgctgtacatctcccgtaaacactgttctgcgatacaatgccgtgacgatatgtaacggagagttcggcatgtcacacc             <  2:505021‑M1/251‑235 (MQ=255)
                                                                                                                                                                                                                                         aTGAAGGGAAATTGTaagtaaaggaaaacatcaccgtgcctggcatcctggacggtgatgccccttcggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatcgcccgtaaacacttttctgcgatacaatgcctttacgttatgtaacggagagttcggcatgtcacacccc           <  2:158065‑M1/251‑237 (MQ=255)
                                                                                                                                                                                                                                           gAAGGGAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaacggagagttcggcatgtcacaccccgc         >  2:48054‑M1/1‑13 (MQ=255)
                                                                                                                                                                                                                                             aGGGAAATTGTaagtaaaggaaaacatcaccgttcccggcatactggacggtgatgcccctacgattgccatcgccagcacgggcatcggtaaagcgtaaggttaaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgatttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaacggagcgttcggcatgtcacaccccgcgt       >  1:341745‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                               ggAAATTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaacggagagttcggcatgtcataccccgcgtt      >  1:415824‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                                  aaTTGTaagtaaaggaaaacatcaccgttcctggcatcctggacggtgatgcccctacggttgccctcgccagcacgggcatcggtaaagcgtaaggttcaacatcgttttaccacttcatgcgattgttgcgtttttgttgcgtattagatcacttaatttgctttacatctcccgtaaacacttttctgcgatacaatgcctttacgttatgtaacggagagttcggcatgtcacaccccgcgttaacg  >  1:515431‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                     
AATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAAT  >  NC_000913/4235657‑4236149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: