New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	57 (1.100)	54/486	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 2406787	0 (0.000)					intergenic (‑146/‑774)	lrhA/alaA	DNA‑binding transcriptional dual regulator LrhA/glutamate‑‑pyruvate aminotransferase AlaA

GCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAA  >  NC_000913/2406541‑2407030                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    gCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggt                                                                                                                                                                                                                                                  <  1:131504‑M2/250‑4 (MQ=255)       gCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgact                                                                                                                                                                                                                                           >  1:292175‑M2/1‑241 (MQ=255)           cGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactcca                                                                                                                                                                                                                                        <  1:94079‑M2/250‑14 (MQ=255)                      gtgtTCAGATCGGCCACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTAATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgat                                                                                                                                                                                                                              <  1:349274‑M2/249‑24 (MQ=255)                        gtTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagt                                                                                                                                                                                                                           >  1:416224‑M2/1‑224 (MQ=255)                          tCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgg                                                                                                                                                                                                                         >  2:529‑M2/1‑222 (MQ=255)                             gATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgtttt                                                                                                                                                                                                                      <  1:190287‑M2/250‑32 (MQ=255)                              aTCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttat                                                                                                                                                                                                                    <  1:112367‑M2/251‑34 (MQ=255)                                       agcaacaAATGTTATCAGCAGATCGAGGCCGAGGTTACTTATCGGCCGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACCAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggaaatgactcccacttattgatagtgttttatgttcagat                                                                                                                                                                                                            <  2:46613‑M2/250‑42 (MQ=255)                                        gcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACATACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGGGCCTCCCGGGCAGTTTCATCCGGAATCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttattttcagataa                                                                                                                                                                                                          >  2:492907‑M2/1‑208 (MQ=255)                                           acaaATGATCTCAGCAGATCGAGGTCGCGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                                                                                                                       <  1:422130‑M2/251‑47 (MQ=255)                                              aaTGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                                                                                                                                    <  1:296388‑M2/251‑50 (MQ=255)                                                      cagcagATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                                                                                                                            >  1:320826‑M2/1‑194 (MQ=255)                                                           gATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGATAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                                                                                                                       <  2:152069‑M2/251‑63 (MQ=255)                                                                    cgaggtTAAGTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttagtgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                                                                                                                               >  2:337973‑M2/1‑180 (MQ=255)                                                                      aggtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                                                                                                                            >  1:355738‑M2/1‑178 (MQ=255)                                                                        gtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACGGAGCTGGTTAATGCAGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaaggactccaacttattgatagtggtttatgttcagataatgcccgatgactttgtcatgcagctccaccga                                                                                                                                                                          >  1:101209‑M2/1‑176 (MQ=255)                                                                                      gATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                                                                                                                             <  1:66274‑M2/250‑89 (MQ=255)                                                                                         ttGCACTTATCATATATTATCAATTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACCCAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGCAAGTAAAAATGCATCTGCGATGCACTCAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaaagcg                                                                                                                                                         <  2:469902‑M2/251‑93 (MQ=255)                                                                                           gCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGATGGTTAATACTGTGCACACAAAAACAAGCACTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCAGGAACCCG‑GACGAAAGCAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                                                                                                                       <  1:362928‑M2/251‑95 (MQ=255)                                                                                                           atCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                                                                                                                                        >  1:41651‑M2/1‑141 (MQ=255)                                                                                                           atCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTACATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                                                                                                                       <  2:395603‑M2/251‑111 (MQ=255)                                                                                                                ttACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg                                                                                                                                  <  1:448333‑M2/251‑116 (MQ=255)                                                                                                                     ggcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                                                                                                              >  1:496172‑M2/1‑131 (MQ=255)                                                                                                                         gcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                                                                                                                         >  1:472911‑M2/1‑127 (MQ=255)                                                                                                                                  gAGCTGGTTAATGCAGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGGTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgacgccaacttagtgatagtgttttatgttcagataatgcccgatgacgttgtcatgcagctccaccgattttgagaacggcagcgacgtccgtcccatccgtgccaggtgctgactcagattca                                                                                                                  >  2:498900‑M2/1‑118 (MQ=255)                                                                                                                                   aGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttggcatgcagctccaccgattttgagaacgacagcgacttccggcccagccgtgccaggtgctgcctcagattcaggt                                                                                                               >  2:218179‑M2/1‑117 (MQ=255)                                                                                                                                       ggTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtta                                                                                                             >  1:10319‑M2/1‑113 (MQ=255)                                                                                                                                                tgtgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaat                                                                                                  <  2:162844‑M2/251‑148 (MQ=255)                                                                                                                                                     acacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttatttatagtgttttatggtcagataatgcccgatgactttgtcatgcagctcctccgattttgagaacgacagctacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgct                                                                                             >  1:327724‑M2/1‑99 (MQ=255)                                                                                                                                                     acacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgct                                                                                             <  2:441270‑M2/251‑153 (MQ=255)                                                                                                                                                        cacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactcca                                                                                                                                                                                                                                        >  2:139856‑M2/1‑96 (MQ=255)                                                                                                                                                        cacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactcca                                                                                                                                                                                                                                        <  1:139856‑M2/109‑14 (MQ=255)                                                                                                                                                              caaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttaagttcatataatgcccgatgactttgtcatgcagcgccaccgattttgagaacgacagcgacttccgtcccatccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatc                                                                                    >  2:107692‑M2/1‑90 (MQ=255)                                                                                                                                                                       ccATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctg                                                                            <  2:189485‑M2/250‑170 (MQ=255)                                                                                                                                                                               aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtg                                                                    >  2:448333‑M2/1‑73 (MQ=255)                                                                                                                                                                               aaTGTGCCTCCCAGGCAGTCTCCTCCGGAACCAG‑AACGAAAGAAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagctaatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattccggttatgccgctcaattcgctgcgtctatcgcttgctgattacgtgc                                                                   <  2:74157‑M2/251‑179 (MQ=255)                                                                                                                                                                                  gtgCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcag                                                                 >  2:131504‑M2/1‑70 (MQ=255)                                                                                                                                                                                     ccTCCCTGGTAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagcttt                                                             <  1:182264‑M2/251‑185 (MQ=255)                                                                                                                                                                                              cAGTTACATCCGGA‑CCCGTGACGAAAGTAAAACTGCATATGCGTTGCACTCACAAAGCggtcatgactccaacttattgatagtgttttatgttcagatattgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgccgctttcccttcagg                                                    <  2:502367‑M2/251‑194 (MQ=255)                                                                                                                                                                                               aGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAACAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggc                                                   <  1:275605‑M2/251‑195 (MQ=255)                                                                                                                                                                                                    cATCCGGCACCCG‑GACGAAAGTAAAAATGCATATGTGTTGCACTAAAAAAGCggcaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgccagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggat                                              <  2:204987‑M2/251‑200 (MQ=255)                                                                                                                                                                                                       ccGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattca                                           >  1:79385‑M2/1‑49 (MQ=255)                                                                                                                                                                                                       ccGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattca                                           >  1:395603‑M2/1‑49 (MQ=255)                                                                                                                                                                                                        cGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcat                                          <  1:300416‑M2/251‑204 (MQ=255)                                                                                                                                                                                                         ggAACCCG‑GACGAAAGTAAAAAGGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcctttgtcattcagctccaccgagtttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccgtcaggctggattcata                                         >  2:28774‑M2/1‑47 (MQ=255)                                                                                                                                                                                                                g‑gACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggc                                  >  2:112367‑M2/1‑40 (MQ=255)                                                                                                                                                                                                                     gAAAGTACAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcag                                                     <  1:404154‑M2/228‑193 (MQ=255)                                                                                                                                                                                                                     gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcag                                                     >  2:404154‑M2/1‑36 (MQ=255)                                                                                                                                                                                                                       aaGTAAAAATGCATATGAGTTTCACTAAAAA‑GCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatccagttccaccgattttgagaactacagcgacttccgtcccagccgtaccaggtgctgcctcagattcaggttatgccgctcaatt                                                                                                 >  1:226151‑M2/1‑33 (MQ=255)                                                                                                                                                                                                                       aaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                                                                                                                                  <  2:426170‑M2/133‑100 (MQ=255)                                                                                                                                                                                                                       aaGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                                                                                                                                  >  1:426170‑M2/1‑34 (MQ=255)                                                                                                                                                                                                                             aaaTGCATATGAGTTGCACTACAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtc                      <  2:87690‑M2/251‑224 (MQ=255)                                                                                                                                                                                                                                        aGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgccctatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcac           <  1:339324‑M2/251‑235 (MQ=255)                                                                                                                                                                                                                                        aGTTGCACTAAAAAAGCggcaatgcctccaacttattgatagtgttttctgctcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctccgattcaggttacgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccctccgtcctccatatcac           <  2:276008‑M2/251‑235 (MQ=255)                                                                                                                                                                                                                                             cACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgccgctttcccttcaggcgggattcatacagcggccagccacccgtcatccatatcaccacgt      <  2:112170‑M2/251‑240 (MQ=255)                                                                                                                                                                                                                                                 aaaaaaGCgttaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcctgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctggctcatattcatgttattccgctcaattcgcggcgtatatcgcttgctgattacgtgcagctttcccttcatgcgggattcatacagcggccatctatccgtcatgcatttctccacgtcaaa  >  2:362928‑M2/1‑8 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    GCGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCG‑GACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTACCCCAA  >  NC_000913/2406541‑2407030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.