Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	577,688	IS3 (+) +3 bp	coding (76‑78/498 nt)	rrrD →	lysozyme

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 316483	NA (NA)	46 (0.890)	44/488	0.2	100%	noncoding (1255/1255 nt)	IS3	repeat region
	?	NC_000913	577688 =	0 (0.000)					coding (76/498 nt)	rrrD	lysozyme
*	?	NC_000913	566777 =	NA (NA)	48 (0.930)	47/488	0.2	100%	noncoding (1/1258 nt)	IS3	repeat region
	?	NC_000913	= 577690	0 (0.000)					coding (78/498 nt)	rrrD	lysozyme

GTATGACAGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAA  >  NC_000913/566536‑567004                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                     gTATGACAGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGGTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGGCTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCAGGACCTGGGGACGGATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTa                                                                                                                                                                                                                              <  1:504952/249‑1 (MQ=255)     gACAGCGAGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGc                                                                                                                                                                                                                        >  1:418383/1‑251 (MQ=255)      aCAGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCa                                                                                                                                                                                                                       <  2:398412/251‑1 (MQ=255)            cgAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTg                                                                                                                                                                                                                 >  1:420685/1‑251 (MQ=255)                      ggggtgAGACGATGCCTGAACCAGTCAAACAACTACCTGTTATGGGCTGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGATGCAATTATTCATTGCCTGGGGACGCATAAGAGCTTCGGTGCACAGTACGGTGCCGCGGTAAGAGGCGCAACCGTAATCTTA‑GCTGACCCAGCAATAGGGGACACGCGGc                                                                                                                                                                                                       <  2:41585/249‑1 (MQ=255)                         gtgAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTaa                                                                                                                                                                                                    <  1:135397/251‑1 (MQ=255)                                   aCCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGGAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGCATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAAc                                                                                                                                                                                          >  1:14084/1‑251 (MQ=255)                                             gTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCAGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagtc                                                                                                                                                                                  >  1:184317/1‑249 (MQ=255)                                               aaaaCAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagtcag                                                                                                                                                                                >  1:188496/1‑249 (MQ=255)                                               aaaaCAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagtcag                                                                                                                                                                                >  2:301656/1‑249 (MQ=255)                                                    aacTTCCTGTTCTGGGAGGTACACCTCTCAATCGTGCACCGGCTATGGCGAAGGTCCAAGAAAGTAAAGCTACGTTCGGCCTGCACGGAGCAAGTGTCTGACGGGCAAAGAGGAAATTATTCATTACCTGGCGACGCATCAGAGCTTCTGTGCCCAGCACGATGCCGCGGTAACAGGCGCCACCGTATTCTGAATCT‑ACTCCGCACTCGAGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAggatac                                                                                                                                                                         >  2:333879/1‑247 (MQ=255)                                                         ccTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcac                                                                                                                                                                     <  2:429480/250‑1 (MQ=255)                                                         ccTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTcac                                                                                                                                                                     <  2:105358/250‑1 (MQ=255)                                                                 gggCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCGGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaaa                                                                                                                                                            <  1:530529/251‑1 (MQ=255)                                                                                 aaTCGTGCACAGGCGCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTa                                                                                                                                            <  2:418383/251‑1 (MQ=255)                                                                                           aGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCg                                                                                                                                  <  2:11248/251‑1 (MQ=255)                                                                                                       aGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTTAGTAAACTCTCATTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTc                                                                                                                      <  1:233502/251‑1 (MQ=255)                                                                                                         aTCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGc                                                                                                                    >  2:42795/1‑251 (MQ=255)                                                                                                                 aaTTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATGATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTGGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAAttt                                                                                                            <  1:504684/251‑1 (MQ=255)                                                                                                                     aaaGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATAAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGc                                                                                                         >  2:470709/1‑250 (MQ=255)                                                                                                                     aaaGCGAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACGGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGGGACTCACATGACAAAAACGGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGc                                                                                                         <  1:62919/250‑1 (MQ=255)                                                                                                                             gTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGcc                                                                                                <  1:77685/251‑1 (MQ=255)                                                                                                                                   aCTGAAGGGAGCAAGTGTATGACGGGCACAGAGGCACTTATTCATTACCTGGGGCCGCATAAGAGCTTCTGTGCACAGGACGTTGACGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCCCATGACAAAAACAGTATCAACCAGTAAAAAACCCAGTAAACAGCATTCGCCTGAATTTCGCAGCGAAGCCCTGa                                                                                            >  2:504710/1‑249 (MQ=21)                                                                                                                                           gAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACAAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTg                                                                                   >  1:314085/1‑250 (MQ=255)                                                                                                                                                    tATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCgg                                                                         >  2:150074/1‑251 (MQ=255)                                                                                                                                                     aTGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGgt                                                                        >  2:386255/1‑251 (MQ=255)                                                                                                                                                         cGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGtt                                                                     >  2:130913/1‑250 (MQ=255)                                                                                                                                                                     cAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGccc                                                        >  2:303228/1‑251 (MQ=255)                                                                                                                                                                     cAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGccc                                                        <  1:42795/251‑1 (MQ=255)                                                                                                                                                                                           gCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATc                                  <  1:349337/251‑1 (MQ=255)                                                                                                                                                                                             aTAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATcac                                >  2:408454/1‑251 (MQ=255)                                                                                                                                                                                               aatagCTTCTGTGCACAAGACGTTGCCGCGGTAACAGGCTCAACCGTAAGCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTTAAGAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTa                                                                                                                                <  1:368594/150‑1 (MQ=17)                                                                                                                                                                                                         gtgCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACaa                      <  1:386255/249‑1 (MQ=255)                                                                                                                                                                                                         gggcccaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATTAATCACAACTCTACAAc                     <  2:493768/245‑1 (MQ=255)                                                                                                                                                                                                          tgCACCGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAccc                                                                                                                                    >  2:47547/1‑138 (MQ=255)                                                                                                                                                                                                          tgCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGGGACGCACATGACAAAAACAGTATCAACCAGTAAAAAAccc                                                                                                                                    <  1:47547/138‑1 (MQ=255)                                                                                                                                                                                                            cacaGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGgc                 <  1:34178/251‑1 (MQ=255)                                                                                                                                                                                                                       gCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAAc        >  1:135330/1‑249 (MQ=39)                                                                                                                                                                                                                          gcgGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACATGAGGCTAAGTGAGTAAACTATCAGTCAGCGATGACTCACATGAAAACAACAGTAACAACCAGTCAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTAAAGCTTGCTGCACGCATCGGTGATACTGCCGCCGCCCGTGAACTCAGCCTGTATGAATCCCACCTCTACAACTGGCGCAGCAAACAGCa    >  1:44484/1‑250 (MQ=11)                                                                                                                                                                                                                            ggTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCACTAGTGGCCACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGCGACTCACATGACAAACACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCaaa  >  1:525200/1‑250 (MQ=255)                                                                                                                                                                                                                                           cGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGcc                                                         >  1:97279/1‑180 (MQ=11)                                                                                                                                                                                                                                           cGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGcc                                                         <  2:97279/180‑1 (MQ=11)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                     GTATGACAGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCTGA‑TCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAA  >  NC_000913/566536‑567004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.