| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,075,877 | 0 | A | C | 36.1% | 75.9 / 12.7 | 61 | T109P (ACC→CCC) | yihX | alpha‑D‑glucose‑1‑phosphate phosphatase YihX |
| Reads supporting (aligned to +/- strand): ref base A (18/21); new base C (1/21); total (19/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.52e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AACGCGTATTCCGCTGGCATCGCTTAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGG > NC_000913/4075630‑4076126 | aaCGCGTATTCCGCTGGCATCGCTTAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATAcc < 2:616454/250‑1 (MQ=255) gTATTCCGCTGGCATCGCTTAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGc < 2:682280/251‑1 (MQ=255) aTTCCACTGGCATAGCTTACGCAGAGTTTTCATCTGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAACTTCGCG‑CCGAAGCGTTCACAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGATACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCACGCATAAACTGCGTGAGCAGGGGCATCGCGCGGGGGTGC‑TTTCCAATCCC‑ACCCGCCt > 2:672230/1‑251 (MQ=255) cGCTTAAGAAGGGTTTTCATAGGGGGGAGGGGTTTCATCAGCAGGAG‑GGGGGGAAAATAGGGGACGAGGCTTTGGCGGAGGCGCTGGGTCATGAGGGGGTTCTACCGCTAAGTTACGGGCATTTCTCTCACGGCTGGCGGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACGGCGTGAGCAGGGGCATCGCGTGGGGGTGC‑TGTCCAAGCCA‑AACCGCCTGCATACCACCTTc < 2:574095/251‑1 (MQ=255) taaaaagaGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCTTTCGCAGGGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAATTG‑ATCGCCATCATGCAAAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTg < 1:301864/245‑1 (MQ=255) tAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCTTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTCCCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGGG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGGGC‑TTTCCAATCCC‑AACCGCCTGCATACCACCTTCTgg < 1:632856/250‑1 (MQ=255) gaggagtttgcattgggggggggCGTTTCGTCAGCATGAGGGTGGGGAATTTGGCG‑ACGAAGCGTTCGCGGAGGGGCTGTGTCAGGAGAGGGCTCTCCCGCTAAGCTACGGGCAGTTCTCTCACGGCTGGCAGGCGTTGTT‑TGTGGCGCTGC‑GCCCGGAAGTG‑TTCGCCATCATGCATAAACTGCGTGGGCGGGGGCATCGGGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCgg < 2:66975/236‑1 (MQ=255) tCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTTCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATAcc > 1:124185/1‑251 (MQ=255) cagttGGGGGAGGTGTTTCATCAGCATGGGCGTGGGAAAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTCCCACTAAGCTACGAGCAGTTCTCGCCCGGCTGGCAGGCGGTGTT‑TGTTGGGCTGC‑GCCGGGAAGTA‑ATCGCCATCATCCATAAACTGCGTGAGCAGGGGCACCGCGGGGTGGTTC‑TTTCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATAcc < 2:577044/246‑1 (MQ=255) gCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCGTCCGCAGAGGCGCTGTTTCACGAGATGGCTCTCCCGCTAAGCTACGAGCATTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCAAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGa < 1:583595/251‑1 (MQ=255) aataaGCATGGGCGTGGGGAAATTGGCG‑ACGAAGCTTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTCCCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCGGGCGGTTTT‑TGTGGCGCGGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAACCGGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTCCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGAtgctgc < 2:200898/247‑1 (MQ=255) gCATGAGCGTGGGGAATTTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTTTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGAcc < 1:136424/251‑1 (MQ=255) tGAGCGTGGGGCAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGGTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCCTGCATAAACTGCGTGAGCCGGGGCATCGCGGGGGGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCatt > 2:28939/1‑250 (MQ=255) gtggggTGGGTAAATTCGCG‑AAGAGGCGTGCGCAGGGGCGCTGGTTCAGGGAATGGCTGTACCCCCAAGCTACGAGATGTGCCCCCACGGCTGTAAGGCTGTGTT‑GGTGGCGCTGC‑GCCCGGAAGGG‑AGCGCCATCATGCATAAACTGGGTGAGGGGTGGCACCGCGTGGTGGGGC‑TTGCCACTCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCat < 2:600460/245‑1 (MQ=255) gCGTGGGGAAATGAGCG‑ACGAAGCGTTCGCAGGGGCGCGGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCATTTCTCTCACGGCTGGCACGCGGTTTT‑TGTGGCGCTGC‑GCCCGGAGGTG‑ATCGCCATCATGCAAAACCTGCGTGGGCGGGGGCAGCGCGTGGTGGTGC‑TTTCCAATCCC‑AACCGCCTGCATACCACCTGCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCAtatct < 1:33487/251‑1 (MQ=255) gaAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTggg > 1:1898/1‑251 (MQ=255) gCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGGAGTG‑ATCGCCATCATGCATAAACTGCGTGCGCAGGGGCATCGCGTGGTGGGGC‑TTTCCCATACC‑ACACGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCAGCTGACCATATCTATCTGTCGCACGATCGGGGGAt > 2:447518/1‑251 (MQ=255) cGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATg > 1:548397/1‑251 (MQ=255) ccGCAGAGGCGTTGTGTCAGGAGATGGCTCTCCCGCTAAGCTACGAGCATTTCTCTCCGGGCTGGCGGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAACCTGCGTGAGCAGGGGCACCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATgcgc < 1:62685/250‑1 (MQ=255) tgcTGTGTCATGAGAGGGCTCTACCGCTAAGCTACGAGCAGTTCTCTAACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑CCCCGGAAGTG‑ATCGCCCTCCTGCATACACTGCGTGAGCCGGGGCATCCCGTGGCGGCGC‑TTTCCAATACC‑AACCGCCTGCTTACCACCTTCTGGCCGGTAGAATTCCCGGGAATTCGGGCTGCTGCTGACCATATCTATCTGTTGCAAGAGCTGGGGATGTGCAAACCTGa > 2:173609/2‑250 (MQ=255) gcTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGCCGTG‑ATCGCCATCATGCATAAAATGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCACCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGa > 1:69440/1‑249 (MQ=255) caggagagggctcgccctctaggcgaCGAGGAGTTCTCCCACGGCTGGCGGGGGGTTTT‑TGTTGCGCGGC‑GCCCGGAAGTG‑ATCGCCATCATGAAAAAACTGCGTCAGCAGGGGCATCGCGGGGTGGTGC‑TTTCAAATACA‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGGCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAAt < 2:288911/226‑1 (MQ=255) aTGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTAcc > 1:58921/1‑250 (MQ=255) tGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCCCCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCCTTTCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTAcc > 2:664524/1‑249 (MQ=255) ctACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGt > 2:255529/1‑251 (MQ=255) cccGCGAAGCTACGCGCGGTCCTCTCCGGGGTGGCAGGCGGTGTT‑TGTGGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCTTGCATAACCGGCGTGAGCAGGGGCATCGCGTGGGGGTGT‑TTCCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGttt < 2:80868/250‑1 (MQ=255) aCCGCTAAGCTACGAGCGGTTCTCACACGGCTGGCAGGCGGTGTT‑TGTGGCGCTGC‑GCCCGAAAGTG‑ATCCCCATCTTGCATAAACGGCGGGAGCAGGGGCATCGCGTGGTGGGGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAATAATACCCGGAAATTCGTGATGCTTCTTACCATATCTATCGGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATg < 1:277810/248‑1 (MQ=255) aCCGCCAAGCAACGGGCAGTGCACTCACGGCGGGCGGGCGGTGTT‑GGTTGCG‑TGCCGCCGGGAAGGA‑ATCGCCACCAGGCAAAAACGGGGGGAGCAGGGGCAGCGCGTGGTGGGCC‑TTTCCAAGCCC‑AGCCGCCTGCAGACCACCTTCGGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTTAAGCACGAATTTACCAGCATGtt < 2:98513/250‑1 (MQ=255) ccgtgaaGCGACGAGCAGTTCACTTTGGGCTGGCAGGCGGTGTT‑GGTGGCGCGGC‑GCCCGGAAGGC‑ATCGCCAACAGGCAAAAACTGCGAGAGCAGGGGAACCACGTGGGGGTGC‑TGTCAAACACC‑ATCCGCCTGCATACCACCGTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATGTACCAGCATGtttt < 1:477493/246‑1 (MQ=255) cGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTg > 2:24508/1‑251 (MQ=255) aaGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAgg > 1:182510/1‑251 (MQ=255) aCGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGGGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATTTCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATTTTTTGCAGGCGGa > 1:166240/1‑250 (MQ=255) cattcctcgcACGGCTGGCGGGGGGGGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ACCGCCTCCATGCATAAGCTGCGTGAGGAGGGGCTGCGCG‑GGGGGGGCGTTGCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGAGCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGttt < 2:37470/242‑1 (MQ=255) gCTGGCAGGCGGTGTT‑TGTGGCGCTGC‑GCCCGGAAGGG‑ACCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGGGGTGC‑TTTCCAAACCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCATCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGAt < 2:645068/251‑1 (MQ=255) gggcggggggtttt‑tgttGCGCTGC‑GCCCGGAAGTG‑ATGGCCATCAGGCAAAACCTGCGGGGGCGGGGGCACCGCGGGGTGGTGC‑TTCCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGAGCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATAc < 2:649398/239‑1 (MQ=255) cAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑ACCCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGt > 1:445946/1‑251 (MQ=255) ggggggTGTG‑TGTGGCGCGGC‑GCCCGGAAGTG‑TTCGCCAGCATGCAAAAACTGCGTGAGCAGGGGCATCGCGGGGGGGGCC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTc < 2:166240/247‑1 (MQ=255) gCGGTGTTGTGT‑GCGCTGC‑GCCCGGA‑GTGGATCGCCATCATGAAAAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TGTCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCtt < 2:561007/251‑1 (MQ=255) gCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACGGCGTGAGCAGGGGCATCGCGGGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCtt < 1:179154/251‑1 (MQ=255) ggtgtttggtgggtggc‑gcCCGTAAGTG‑CTCGCCATCATGCATAAACTGCGGGAGCGGGTGCATCGCGGGGTGGTTC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCtttt < 2:498489/236‑1 (MQ=255) ttgCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGAt > 1:169248/1‑251 (MQ=255) ggcgcggc‑gcCCGGAAGTG‑ATCGCAATCATGCAAAAACGGCGTGAGCAGGGGCATCGGGTGGGGGTGT‑TTTCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATa < 2:1898/250‑1 (MQ=255) gctgc‑gcCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACg < 1:180230/251‑1 (MQ=255) cgtggcgccggaaaGTG‑ATCGCCACAATGAATAAACGGGGTGAGCGGGGGCATCGCGGGGGGGTGC‑TTTCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAAc < 2:547753/239‑1 (MQ=255) cccGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCCGGGGCATCGCGTGGTGGTGT‑TTCCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGata < 1:28939/251‑1 (MQ=255) gggaatggaccGCCATCATGCAAAAACGGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTCCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGataat < 2:58921/241‑1 (MQ=255) cgccaccttgaaaaaactgggggggCAGGGGCTTCGCGTGGGGGGGC‑TTTCCAATACC‑ATCCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGa < 2:548397/226‑1 (MQ=255) gCCATCATGCATAACCTGGGTGGGCGGGGGCTGGGCGTGGTGGTTC‑TTTCAAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACTATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATTTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATGCGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGc < 1:654994/251‑1 (MQ=255) atcatGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCa > 1:221774/1‑250 (MQ=255) gcagaaacggggggggCAGGGGCACCGCGTGGGGGGTC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGc < 2:574970/236‑1 (MQ=255) aaacggcgggggCAGGGGCATCGCGGGGGGGTGC‑TTCCCAATCCA‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTGTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTggg < 2:445946/240‑1 (MQ=255) gCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCAtt > 1:4125/1‑250 (MQ=255) gggtggcgggggctccgcgGGGTGGTGC‑TTCCCAAGCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGAGAATATAGAAGGAGCCAATCAGCTGGTCATTAc < 2:317805/236‑1 (MQ=255) gAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATCCC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCGCCCAGCGATACGGTCTTTTTCGACTATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAg < 1:120716/251‑1 (MQ=255) cgggggCACCGCGTGGGGGGGC‑TTTCCAACACA‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGAGCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTAt < 2:221774/249‑1 (MQ=255) gggggCACCGCGGGGGGGTGC‑TTTCCAAACCC‑AACCGCCTGCATACCACCTTCTTGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTAtt < 2:168048/250‑1 (MQ=255) gaggggcctgcgcgtgtggttgtttCCAATACCCAACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGTAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAATGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTa < 2:105239/229‑1 (MQ=255) gggCATCGCGTGGTGGTGC‑TTTCCAATCCC‑ATCCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTTGGCATTACCAGTATTCt < 1:170604/251‑1 (MQ=255) gcgTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGaa > 1:598203/1‑250 (MQ=255) gtgggtggtgC‑TTTCCAACACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAg < 2:605748/248‑1 (MQ=255) aaTACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATccc < 2:625679/251‑1 (MQ=255) aCC‑AACAGCCTGCATAACACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTAACCCAGCGATACGGTCTTTTTCGGCGATAACGCCGCTAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCgg > 1:491522/1‑250 (MQ=255) | AACGCGTATTCCGCTGGCATCGCTTAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCG‑ACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTT‑TGTTGCGCTGC‑GCCCGGAAGTG‑ATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGC‑TTTCCAATACC‑AACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGG > NC_000913/4075630‑4076126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |