| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 385,797 | 0 | T | G | 29.8% | 116.4 / 13.1 | 69 | V189G (GTG→GGG) | tauA | taurine ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base T (10/37); new base G (20/0); total (32/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.18e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTAAAGAAAACTATCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGAAT > NC_000913/385558‑386041 | ggtAAAGAAAACTATCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCAG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGAtt < 1:223246/251‑1 (MQ=255) aaaCTATCAGCAAACCGGAAGATCTGATTGGCAACCGCATCTCCGTACCGTTTAGCTCCACCCCCCACTACAGCCTGCTGGCGGCACGGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATAGTGATGGTGCTTATGTCTGGTGACCGGCGG‑T‑TAGC‑TTCC‑TGGATAAATGC‑GGCAAGGTGATGACCGATACTG‑ATCAg < 2:401682/251‑1 (MQ=255) aCTATCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GACC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑t < 1:175771/251‑1 (MQ=255) aTCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCTG‑T‑TAAC‑GCCC‑TTGAATAAGAC‑GTCAAGGTGTGGACCGATTCTG‑AACAGG‑TCg < 2:647461/250‑1 (MQ=255) aTCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGCCTGGGCACCGGCGG‑C‑TAAC‑CCCC‑AGGGCACAGACCGGCA‑GGGGTTGTCCGATTCTG‑ACCAGG‑CCgg > 1:261815/1‑251 (MQ=255) aaCCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGGGTATAAC‑‑CCC‑TGGAAAAA‑AC‑GGCGAGGTGTTTACCGTGTCTG‑aaaaagtgggggagtgg > 2:499248/1‑236 (MQ=255) aTCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TATC‑ACCC‑CGGGAAAAAAC‑GGGAAGGGGTTGGCCGGTTTTG‑AACAgggtggggcgtggggggggccc > 1:71175/1‑231 (MQ=255) gCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCTGCGG‑T‑TAAC‑GCTC‑TGGAGAAAGAC‑GGCAAGGTGTTGACCGATTCTT‑AACGGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGggtggt < 1:307177/251‑1 (MQ=255) ccGTACCGTTTATCTCCCCCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGgtggtg < 2:53228/251‑1 (MQ=255) cGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAACCCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAACCACCC‑TGGACAA‑GAC‑GGCAACGAGTTGCCCGATTTTGCAGCAGG‑‑CGGGG‑CGTGGGGGGCGCC‑AACGCTGGA‑CGGCTggggggggg > 1:94990/1‑245 (MQ=255) gTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTgcg < 2:97945/251‑1 (MQ=255) aCCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGGAAAAAAC‑AGCAAGGGGTTGACCGGTTCTG‑AACAGG‑TCGGGC‑AGTGGGGGGCGCC‑AACGCGGGG‑CGGCTggggggggtgcc > 1:528175/1‑242 (MQ=255) aCCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTgcg‑c < 1:425257/250‑1 (MQ=255) ccGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGCAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TCAC‑ACCC‑TGGAAAAAGAC‑GGCAAAGGGTTGAACGGTTCTG‑ACCAGG‑TCGGGC‑CGGGGGGCGCGCCCAAC‑CTGGA‑CGTCCGggtggggggca > 1:582569/1‑244 (MQ=255) ccGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAAAC‑GGCAAGGGGTTGACCGATTCTT‑GACACG‑GCAGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGTGTGGGGCG‑Ca > 1:450053/1‑250 (MQ=255) gTTTATCTCCACCACCCACTACAGACTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑C‑TAAA‑GCCC‑TGGGAAAAGAA‑GGCAAGGGGTTGACCGATTTTG‑AAAAGGGTTGGG‑‑AGTGGGGGGCGCC‑ACCGCCGGA‑AGGCTggggggggggcaaa > 1:593143/1‑239 (MQ=255) tATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGGGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGAt < 2:388516/250‑1 (MQ=255) aTCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGAtt < 1:445096/250‑1 (MQ=255) cccacTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑G‑TTAC‑GCCCCGGGAAAAAAAG‑GGCAGGGGGTGGAC‑GGTTCTT‑GACAGG‑GCGGGC‑AGGGGGGGGGGGC‑CACGCTGGA‑CGTCTGGGGGGTGGG‑GCAAGATTTTTCCGGGaa > 1:646305/1‑250 (MQ=255) aCAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCG‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCt < 1:63643/251‑1 (MQ=255) ccTGCTGGCGGCACTGAAACACTGGGGCATTAAGCCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTTGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTTGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAgg < 1:620204/251‑1 (MQ=255) ggcggcCCTGAAACACTGAGGCATTAAACCCGGGCAAGTGGAGATAGTGGACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCATATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AGCAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGTGAAACATCCTGAGGTCGt < 2:556234/249‑1 (MQ=255) ggcggcACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGgc < 1:238436/187‑1 (MQ=255) ggcACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAA‑GCCC‑CGGGAAAAAAC‑GGCAAGGGGTTGACCGATTCTT‑GACAGG‑GCGGGG‑CGCGGGGGGCGCC‑AACGCCGGG‑CGTCTGGGGGGGGCG‑CAAAGATTTTGCCGGGAAAAATCCTGAGGGCGTG‑aaa > 1:226043/1‑250 (MQ=255) cacggAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCg < 2:584005/247‑1 (MQ=255) tGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TCAA‑GCCC‑CGGGAAAAAAA‑GGGAAGGGGTTGACCGCTTCTG‑TACAGG‑GCGGGC‑AGTGGGGGGCGCC‑CACGCCGGC‑CGTCTGGGGGGGGCG‑CCAAGATTTTTCCCAGGAACATCCCTAGGGCGTG‑AAAGCGttt > 1:682441/1‑250 (MQ=255) gAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCg < 2:149237/251‑1 (MQ=255) gAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑G‑TTAC‑GCCC‑CGGGAAAAGAC‑GGCCAGGGGTTGGCCCATTCTT‑TACAAG‑GCGGGC‑AGTGGGGGGCGCC‑CACCCTGGGGCG‑CTGGGGGGGGCG‑CAAAGAGTTTGCCGGGCAACATccctggggcggggaagcggtcc > 2:544264/1‑231 (MQ=255) aaaCACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑CGGAAAAAAAA‑GGCCAGGGGTTGGGCGATTCTG‑AACAGG‑GCGGGCCAG‑GGGGCGCGCC‑CACCCTGGG‑GGGCTGGGGGGGGCGGCAAGGATTT‑GCCGAGGAACAACCTGAGGGGGTG‑GAAGCGTTCGc > 1:466476/1‑251 (MQ=255) aaCACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAAAC‑GGCAAGGGGTTGGCCGATTTTG‑AACAGG‑GCGGGC‑AGTGGGGGGCGCC‑AAAGCTGGA‑CGGCTGGGGGGGGCG‑CAAAGATTTTTCCGAGAAACATCCTGAGGGCGTG‑AAAACGGTCGCt > 1:225480/1‑251 (MQ=255) cacTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTCTGTCTGGGCACCGGCGG‑A‑TAAA‑GCCC‑CGGGAAAAAAC‑GGCGAGGTGTTGACCGATTTTG‑AACAGG‑GCGGGC‑AGGGGGGGGCGCC‑CACGCTGGG‑CGTCTGGGGGGTGCG‑CCAAGATTTTGCCGAGAAACATCCTGAGGGCGTG‑AAAGCGTTCGCTa > 1:448640/1‑250 (MQ=255) aCCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATg < 2:83063/251‑1 (MQ=255) cGGGCAAGTGGAGATTGGGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCTATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTc < 1:485428/251‑1 (MQ=255) cAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑G‑TAAC‑CCCC‑CTGAAAAAGAC‑GGCCAGGGGGTTACCGGTTCTT‑CACAAG‑GCGGGC‑CGAGGGGGGCGCC‑AACACTGGG‑CGGCTGGGTGGGGCG‑CCAAGATTTTTCCGCGAAACATCCCGAGGGCGGGGAAAG‑GTTAGCTAAAAGCGCCATCGATgaccagc > 1:48454/1‑244 (MQ=255) aaGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGTGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑aa < 1:70790/251‑1 (MQ=255) ggAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGGAAAAGAA‑GGCGAGGTGTTGTCCGATTTCG‑AACAGG‑TCGGGC‑AGGGGGGCGCGCC‑CACCCTGGAGCG‑CTTGGGGGGGCGGCAAGAATTTTCCCGAGAA‑CATCCCGAGGGCGTG‑TAAACGTTCCCTACAACCGCCATCgtagccctgcaacccc > 2:231677/1‑236 (MQ=255) ggAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGt < 1:499248/251‑1 (MQ=255) gAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTa < 2:466476/251‑1 (MQ=255) gccgccCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTTGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACg < 1:297807/251‑1 (MQ=255) cGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGc < 2:682441/251‑1 (MQ=255) cGCTGCCTGGCAGCGGGGAGAGATCGATGGTGCTTATGTCTGGGCAGCGGCGG‑T‑GAGC‑GCTC‑GGGAAAAAGAC‑GGCAATGTGTTGACCGATTCTG‑AACAGG‑GCGGGC‑ATTGGGGCGCGCC‑AACGGTGGA‑GGTCTGGGTGGTGCG‑CAAAGATTGTGTCGAGAAACAGTCTGAGGTCGTT‑AAAGCGTTCGTTAAAAGCGCCATCGATGCTGAGC‑AATCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGc < 1:306815/251‑1 (MQ=255) aGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TTAC‑GCCC‑CGGAAAAAGAC‑GGCAAGGGGTTGGCCGATTCTG‑AACAGG‑TCGGGC‑AGGGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGGGGTGCG‑GAAAGATTTTTCCGAGAAACATCCTGAGGGCGGG‑AAAGCGGTCGCTAAAAGCGCCCTCGATGCTCAGC‑AACCGTACATTGCTAACCCACACGTGTGGCTGAAACAGCCGGCAAACAt > 1:5726/1‑250 (MQ=255) gCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAA‑GCCC‑CGGGAAAAAAC‑GGGAAGGGGTTGACCGGTTCTG‑AACAGG‑GCGGGC‑CGTGGGGGGCGCC‑CACGCTGGG‑CGGCTGGGGGGGGGG‑CAAAGATTTTTCCGGGAAACATCCTGGGGTCGTG‑AAAGCGTTCGCTAAAAACGCCATCGATGCTCCGC‑AACCGCACATTTCTAACCCCGACGTGTGGCTGCAACAGCCGGaaaaaaacc > 1:228518/1‑246 (MQ=255) ggggAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TCGGAAAAGAC‑GGCAAGGGGGTGAACGGTTCTG‑AACACG‑TCGGGC‑AGGGGGGGGCGCC‑CACGCTGGA‑CGTCTGGGTGGGGGG‑CAAAGATTTTTGCGGGAAACATCCTGAGGGCGTG‑GAAGCGTTTGCTTAAAGCGCCCTCGGAGCTCAGCCACCCGCAC‑TTTCTAACCCCGACGTGTGGCTggcaccgaccgaaaacatcacc > 2:38384/1‑230 (MQ=255) agaTATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAAc < 1:544264/251‑1 (MQ=255) aTGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGCAAAAAAC‑CGCAAAGGGTTGACCGCGTCTG‑AAAAGG‑GCGGGC‑AGGGGGGGGCGCC‑CAAGCTGGA‑CGTCCCGGGGGGGCG‑CAAAGAATTTGCCGGGAAACAACCTGAGGTCGGG‑AAAGCGTTCGCTAAAAGAGCCATCGATGCTCAGC‑AACCGTCCATTTCTAACCCAAGCGGGTGGGTGAAAAAACCGGAAAACATCCACAAAATGGCGCGt > 1:677612/1‑251 (MQ=255) aTGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACAGCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAATAGCCGGAAAACATCAGCAAACTGGCGCGt < 1:30617/251‑1 (MQ=255) aTGGTGCTTATGTCTGGGCACCGGCGG‑A‑TAAA‑GCCC‑TGGGAAAAAAC‑GGCAAGGGGTTGACCGATTTTG‑AACAGG‑GCGGGC‑AGTGGGGGGCGCC‑CACGCTGGA‑CGTCTGGGGGGGGCG‑CAAAGATTTTTCCCAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTTAAAACGCCATCGATGCTCCGC‑AACCGTACATTGCTTACCCCGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGcgcgg > 1:530296/1‑250 (MQ=255) gTGCTGATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AGCCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTa < 2:634534/251‑1 (MQ=255) gCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGGGGTGACCCGTTCTG‑AAAAGG‑TCGGGC‑AGGGGGGGGCGCC‑AACGCCGGA‑CGTCTGGGGGGGGCG‑CCAAGATTTTTCCGAGAAACATCCTGAGGTCGTG‑AAAGCGGTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTTCTAACCCAGACGTGTGGCTGAAACAGCCGGGAAACATCAGCAAACTGGCGCCtttta > 1:515386/1‑248 (MQ=255) gTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGt < 2:189918/251‑1 (MQ=255) gggCACCGGCGG‑T‑TAAC‑GCCC‑GGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGc < 2:71175/249‑1 (MQ=255) gCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑GCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGa < 2:582569/251‑1 (MQ=255) cggcgg‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGGGTTGACCGGTTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAAATGGCGCGTTTAAGCGGCGGGGCTGAAggg > 1:156577/1‑250 (MQ=255) gg‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGGGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAACGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACg > 1:523643/1‑251 (MQ=255) g‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGt < 2:228518/251‑1 (MQ=255) g‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCGG‑AACAGG‑TCTGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGt < 2:226043/251‑1 (MQ=255) aaC‑GCCC‑TGGCAAAAGAC‑GGCAAGGTGTTGACCGATTCAG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATAGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGAAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTcc > 1:205621/1‑251 (MQ=255) aaC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTACGCGGCGTGCCTGAAGGTGACGTTcc > 2:224766/1‑251 (MQ=255) aC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTTCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAATCTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCg < 1:81546/251‑1 (MQ=255) gCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCggg > 2:259662/1‑251 (MQ=255) tGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGAAAACTGGCGCGTTTACGCGGCGTGCCTGAAGGCGACGTTCCGGGGCTg > 2:376791/1‑251 (MQ=255) aaaaaGCC‑GGCAAGGTGTTGACCGAGTCGG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTg < 2:450053/251‑1 (MQ=255) aaaaaGAC‑GGCAAGGTGTTGACCGATTCTG‑CACAGG‑TCCGGC‑CGCGGGGCGAGCC‑AACGCTGGA‑CGCCTGGGCGGTGCG‑ACAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCCTCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTg > 1:92312/1‑251 (MQ=255) aaaaGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGa < 1:25344/251‑1 (MQ=255) aaaGTC‑GGCAAGGAGTTGACCGATTCTG‑AACAGG‑ACGGGC‑AGTGGGGCGCGGC‑AACGCTGGA‑CGTCTGGGAGGTGCG‑CGAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATAGATGCTCAGC‑AACCGTGCATTGCTAACCCAGACGTGTGGCTGCAACAGCCGGAAAACATCCGCAAACTGGCGCGTTTACGCGGCGTGCCTGACGGGGTCGTTCTGGGGCTGGTGa > 2:119096/1‑250 (MQ=255) c‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGa < 1:38384/251‑1 (MQ=255) ggCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGCGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGa > 1:592491/1‑250 (MQ=255) gCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCTTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGAAt < 1:670815/251‑1 (MQ=255) | GGTAAAGAAAACTATCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGG‑T‑TAAC‑GCCC‑TGGAAAAAGAC‑GGCAAGGTGTTGACCGATTCTG‑AACAGG‑TCGGGC‑AGTGGGGCGCGCC‑AACGCTGGA‑CGTCTGGGTGGTGCG‑CAAAGATTTTGCCGAGAAACATCCTGAGGTCGTG‑AAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGC‑AACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGAAT > NC_000913/385558‑386041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |