New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	75 (1.140)	65/486	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 2406787	0 (0.000)					intergenic (‑146/‑774)	lrhA/alaA	DNA‑binding transcriptional dual regulator LrhA/glutamate‑‑pyruvate aminotransferase AlaA

CGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTA  >  NC_000913/2406542‑2407024                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                              cGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaa                                                                                                                                                                                                                                          >  2:538506‑M2/1‑246 (MQ=255) cGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGCAAAAATGCATATGAGTTGCACTAAAAAAGCggta                                                                                                                                                                                                                                           <  2:198237‑M2/250‑5 (MQ=255)  ggCAGCTGCGGCAGCAAACGTGTTCCGATCGGCAACCGCAACCAGTGTTCTCAGCAGATCGCGGTTGAGGATATTTATCGGACGCTTTGCACTTATCATATATTATCACTTACTGGCGGCTCATAATGAGCTGGTTAATGTTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGGATATGAGTTGCACTAAAACAGAggtaat                                                                                                                                                                                                                                         <  2:647886‑M2/251‑7 (MQ=255)  ggCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaat                                                                                                                                                                                                                                         <  1:210342‑M2/251‑7 (MQ=255)     aGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgac                                                                                                                                                                                                                                      >  1:130967‑M2/1‑242 (MQ=255)      gCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGGTGCACTAAAAAAGCggtaatgact                                                                                                                                                                                                                                     >  2:69991‑M2/1‑241 (MQ=255)         gCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactcc                                                                                                                                                                                                                                   <  2:223999‑M2/250‑13 (MQ=255)                 aaaaGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattg                                                                                                                                                                                                                          <  1:254485‑M2/251‑22 (MQ=255)                        ttCAGACCGGCAAAAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTACTTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCCCATACTGAGCTGGTTTATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgt                                                                                                                                                                                                                   <  2:271501‑M2/251‑29 (MQ=255)                         tCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGCCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGACAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtactgactccaacttattgatagtgtt                                                                                                                                                                                                                  <  1:90871‑M2/251‑30 (MQ=255)                          cAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATAGGAGTTGCACTAAAAAAGCgggaaggactccaacttattgatagtgtt                                                                                                                                                                                                                  >  2:287401‑M2/1‑221 (MQ=255)                                   aacagcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACGAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcag                                                                                                                                                                                                        >  1:116884‑M2/1‑212 (MQ=255)                                    acagcaacaAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttc                                                                                                                                                                                                          <  2:181535‑M2/248‑38 (MQ=255)                                              aTGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGGTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                                                                                                                              <  2:366306‑M2/250‑50 (MQ=255)                                                 ttCTCAGCAGATCGAGGTCGAGGTTAATTCTCGGACGCTTTTCACTTATCATATATTATCCCTTACTGGCGGCTCTTACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCCTCCGGAAC‑CCGGACGAAAGTAAAAATGCCTATGAGTTGCACTAAAAAAGCggtaatgaatccaacttattgatagtgttttattttcagataatgcccgatg                                                                                                                                                                                           <  2:124306‑M2/250‑53 (MQ=255)                                                     cagcagATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                                                                                                                      >  1:223999‑M2/1‑194 (MQ=255)                                                       gcagATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                                                                                                                    <  1:28908‑M2/251‑60 (MQ=255)                                                                 gtcgaggtTAATTATCGGACGATTTGCACTTAGCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagggttttatgttcagataatgcccgatgactttgtcaggcagctc                                                                                                                                                                          >  2:243259‑M2/1‑182 (MQ=255)                                                                       gtTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgg                                                                                                                                                                    <  2:323253‑M2/251‑76 (MQ=255)                                                                         tAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                                                                                                                                   >  1:198237‑M2/1‑174 (MQ=255)                                                                                       tttGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACCAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                                                                                                                    <  1:403216‑M2/251‑92 (MQ=255)                                                                                        ttGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                                                                                                                    >  2:919‑M2/1‑159 (MQ=255)                                                                                               tATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacgtattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc                                                                                                                                              >  2:667295‑M2/1‑152 (MQ=255)                                                                                                   atatatTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCCGTGAACACACAAACACGCAATTCCATTTGTAATGTGCCTCCATGGCAGTTTCATCCGGAAC‑ACGGACGAAAGTAAAAATGCATATGAGTTGCACTCAAAAAGAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgcttttgagaacgacagcgacttccgtccc                                                                                                                                        <  1:446327‑M2/251‑104 (MQ=255)                                                                                                     atatTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgctagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccg                                                                                                                                      <  1:33950‑M2/251‑106 (MQ=255)                                                                                                          atCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactcc                                                                                                                                                                                                                                   <  2:525211‑M2/153‑13 (MQ=255)                                                                                                          atCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaaggactcc                                                                                                                                                                                                                                   >  1:525211‑M2/1‑141 (MQ=255)                                                                                                            cACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                                                                                                                                >  2:684578‑M2/1‑139 (MQ=255)                                                                                                             aCTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                                                                                                               <  1:332223‑M2/250‑113 (MQ=255)                                                                                                                 aCTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                                                                                                                           >  1:578858‑M2/1‑134 (MQ=255)                                                                                                                       ggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                                                                                                                    >  2:210342‑M2/1‑128 (MQ=255)                                                                                                                                  aGCTGGTTACTGCTGTGCACACACAAACAAGCAATTCCATTTGTACTGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt                                                                                                         <  2:53570‑M2/251‑135 (MQ=255)                                                                                                                                   gCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt                                                                                                        >  1:282738‑M2/1‑116 (MQ=255)                                                                                                                                            tGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctc                                                                                               <  1:107968‑M2/251‑145 (MQ=255)                                                                                                                                              cTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAACAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcaaccgattttgagaacgacagcgacttccgtctcagccgtgccag                                                                                                                             <  1:562865‑M2/219‑115 (MQ=255)                                                                                                                                                gtgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacgtccgtcccagccgtggcaggtgctgcctcagattcaggttatgccgctcaatt                                                                                           >  1:332713‑M2/1‑103 (MQ=255)                                                                                                                                                  gCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcg                                                                                         <  1:190720‑M2/251‑151 (MQ=255)                                                                                                                                                   cacacacaAACAAGCAATTCCATTTGTACTGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgc                                                                                        <  2:642273‑M2/251‑152 (MQ=255)                                                                                                                                                   cacacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGACAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcgggttatgcggctcaattcgc                                                                                        <  2:206796‑M2/251‑152 (MQ=255)                                                                                                                                                      acacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgattactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggttctgcctcagattcaggttatgccgctcaattcgctgc                                                                                     >  1:271501‑M2/1‑97 (MQ=255)                                                                                                                                                           aacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggcgctgcctcagattcaggttatgccgctcaattcgctgcgtat                                                                                 <  2:357665‑M2/250‑159 (MQ=255)                                                                                                                                                            acaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatat                                                                               >  2:153712‑M2/1‑91 (MQ=255)                                                                                                                                                               aGCAATTCCATTTGTAATGTGCCTCCCCGGCAGTTTCATCCGGAAC‑CCGGACGCAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtcatgacaccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcc                                                                                                   <  1:294499‑M2/228‑141 (MQ=255)                                                                                                                                                               aGCAAGTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccatcttattgatagtgtgtgatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaactacagcgacttccttcccagccgtgccaggtgctgcctcagatgcaggttatgcc                                                                                                   >  2:294499‑M2/1‑88 (MQ=255)                                                                                                                                                                  aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattccggttatgccgctcaattctcggcgtatatcgcttg                                                                         <  2:129317‑M2/251‑167 (MQ=255)                                                                                                                                                                  aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtagatcgcttg                                                                         <  2:266081‑M2/251‑167 (MQ=255)                                                                                                                                                                       cATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgat                                                                    >  1:496541‑M2/1‑80 (MQ=255)                                                                                                                                                                          ttGTACTGTGACTACATGGCAGTTTCATCGGGAAC‑CCGGACGAAAGTCAACATGCATATGAGTTGCACTAAAAAAGCggtactgactccaccttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattac                                                                 <  2:284890‑M2/251‑175 (MQ=255)                                                                                                                                                                          ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattac                                                                 <  1:607254‑M2/251‑175 (MQ=255)                                                                                                                                                                               aTGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgca                                                            >  2:496719‑M2/1‑72 (MQ=255)                                                                                                                                                                                    ccTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagcttt                                                       >  2:224907‑M2/1‑67 (MQ=255)                                                                                                                                                                                       cccTGGCAGTTTCGTCAGGAACACCGGCCCAA‑GTGACAATCCATATGAGTCGCACTAAAAAAGCggtaatcactccaacttcttgctagtgttttatgttcagataatgaccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcatatatcgcttgctgattacgtgcagctttccc                                                    <  2:302701‑M2/251‑188 (MQ=255)                                                                                                                                                                                              aggatcatcCGTAAA‑CCGGACGAAAGTAAAAATGCATATGCGTTGCACTAAAAAAGCggtaatgactccaacttcttaatagtgttttatgttcagctaatgcccgatgactttgtcatgcatctccaccgattttgagaacgacagcgacttccgtcccagccgtgcccggtgctgcctcagattcaggctatgccgctcaattcgctgcgtatatcccttgctgcttacgtgcagctttcagtctggtc                                             <  2:132849‑M2/247‑195 (MQ=255)                                                                                                                                                                                              aGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggc                                             <  2:321245‑M2/251‑195 (MQ=255)                                                                                                                                                                                              aGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacgtccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttc                                                      >  1:132849‑M2/1‑57 (MQ=255)                                                                                                                                                                                                      ccGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatgcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattca                                     >  2:681797‑M2/1‑49 (MQ=255)                                                                                                                                                                                                      ccGGAAC‑CCAGACAAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagttttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcagtcgggattc                                      >  2:561853‑M2/1‑49 (MQ=255)                                                                                                                                                                                                          aaC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatac                                  <  1:228541‑M2/250‑206 (MQ=255)                                                                                                                                                                                                                 gACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggcc                           >  1:49645‑M2/1‑39 (MQ=255)                                                                                                                                                                                                                  aCGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggcca                          >  1:276841‑M2/1‑38 (MQ=255)                                                                                                                                                                                                                    gAAAGTAAAAATGCATCTGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcagctcaattcgctgcgtatatcgctttctgattacgtgcagctttcccttcaggggggattcatacagcggccagc                        <  1:597945‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                    gAAAGTAAAAATGCATCTGAGATGCACTACAAAAGCggcaatgactccctcttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattccggttatgccgctcaattcgctgcgtatatctcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc                        <  1:495559‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                    gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc                        <  2:577469‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                    gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc                        <  1:112991‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                          aaaaaTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccg                  <  1:259651‑M2/251‑222 (MQ=255)                                                                                                                                                                                                                          aaaaaTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgtgcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccgtcc                   >  2:258499‑M2/1‑30 (MQ=255)                                                                                                                                                                                                                           aaaaTGCATATGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgt                 <  2:283515‑M2/251‑223 (MQ=255)                                                                                                                                                                                                                                gCATATGAGTTGCACTAAACAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatcc            <  2:345608‑M2/251‑228 (MQ=255)                                                                                                                                                                                                                                  atatGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccat          <  1:221071‑M2/251‑230 (MQ=255)                                                                                                                                                                                                                                  atatGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccggcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctacgtatatcgcttgctgattacgtgcagctttcccttcagtcgggattcatacagcggccacccatccgtcatccat          >  2:340863‑M2/1‑22 (MQ=255)                                                                                                                                                                                                                                    atGAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattccggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggcccgccatccgtcatccatat        <  1:500865‑M2/251‑232 (MQ=255)                                                                                                                                                                                                                                      gAGTTGCACTAAACAAGCggtaatgactccaacttcttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatc       <  2:138981‑M2/250‑233 (MQ=255)                                                                                                                                                                                                                                      gAGTTGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcc      <  2:44445‑M2/251‑234 (MQ=255)                                                                                                                                                                                                                                         ttGCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcacc    <  2:356585‑M2/250‑236 (MQ=255)                                                                                                                                                                                                                                           gCACTAAAAAAGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccac  >  2:192217‑M2/1‑13 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                              CGGCAGCTGCGGCAGCAAAAGTGTTCAGATCGGCAACAGCAACAAATGTTCTCAGCAGATCGAGGTCGAGGTTAATTATCGGACGATTTGCACTTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAAC‑CCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACTCTCGTGCAGCATCGCTGGTCATACGCGAACACGTACCAACAGCAATGGTGAGGCGGCATCAAGAGCAGGGATCCGTCATTTATCCGAGCATTTTA  >  NC_000913/2406542‑2407024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.