New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1397238	NA (NA)	50 (0.760)	48/488	0.4	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	= 1978494	0 (0.000)					intergenic (‑297/+24)	flhD/insB5	DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB

GGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGAAC  >  NC_000913/1396994‑1397482                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     gggTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCctaact                                                                                                                                                                                                                                                >  1:40819/1‑251 (MQ=11)      gCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATc                                                                                                                                                                                                                                            <  2:153949/250‑1 (MQ=32)      gCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCa                                                                                                                                                                                                                                           <  2:128470/251‑1 (MQ=32)                gATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATAAATGCGTTGAt                                                                                                                                                                                                                                 >  2:356169/1‑251 (MQ=18)                        aCTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGTGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCGGCCGAGAAGAATTTCCCCGCGTATTCGCTCCTTCCCTAACTAATCAATGCGTTGATTGTAAATc                                                                                                                                                                                                                         <  2:588051/251‑1 (MQ=255)                              gattttcttcgtgcgggacgaCCTGTTTCGGGCCGACCAAATGTTACGTCCTTGGGAGCGACCTCACTAGAAACTGGCAATTCAGGCTTAACTGGAGAAGAACCGGTCTAAATAGGCTGAT‑CAACGGCATTTACGGGCGAACAAATCGGCTCAAACATGAAGAAATGAAACGAATGCGACAGACGAGCAGAATTTCCCCGCTTATTCGCACCTTCCCTATCTAATCAATGCGTTGATTATACATCCAGCt                                                                                                                                                                                                                    >  2:462281/21‑250 (MQ=2)                                    aTTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCCCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAgaggt                                                                                                                                                                                                             <  2:150931/251‑1 (MQ=255)                                              gCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCa                                                                                                                                                                                                   <  1:662535/251‑1 (MQ=255)                                                      gttgcGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATTCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAg                                                                                                                                                                                             <  1:43226/245‑1 (MQ=255)                                                      gTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGa                                                                                                                                                                                            <  1:512707/250‑1 (MQ=255)                                                        ttccggCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAAAGGCGAAGAAACGGTCTAAAAAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAATAAATGAAATGACGGAGTCAGCCGAGAAGAATTGCCCCGCTTAATCGCACCTTCCCTAACGAATCAAAGCGTTGATTGTAAATCCAGCTAAAAGGTGAGGTTTTCAGAGCAGACa                                                                                                                                                                                          <  2:454721/246‑1 (MQ=17)                                                         gcgtgCGGGCCAAATGAGACGTCTGAGGGAGAGATCTCACTAAAAACTTGGTACAACGCCTTAAATGGCGAAGAAACGGTCTAAAGATGCTGATTCAA‑GGCATTTCCGGGAGAAAAACTCGGCTCAAACATCAATAAATGAAATTACGGAGTGAGCAGAGGAGAATTTCCCCGCTTATTCGCACCAGCCCTATCTAATCAATGCGCTGAGTGTAAATCCAGCTAACAGGTTGGATTTTAAGAGAAGACAAc                                                                                                                                                                                        <  2:624322/247‑1 (MQ=9)                                                           gggCGGAAAAAATGATACGTCAGTGGCAGAGATCTCACTAAAAACTGGGGATAACGCCATAAATGGCGAAGCAACGGTCTAACTAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGCATGAGTCAGCCGAGCAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGATGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACgg                                                                                                                                                                                      >  2:86097/1‑251 (MQ=17)                                                             gCGGACCAAAGGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTGAAATGGCGAAGAAACGGTCTAAATAGGCGGATTCAA‑GGCACGTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCGCCGTCCCGAACTAATCAATGCGTTGATTGTAAATCCAGCTAAgaggtg                                                                                                                                                                                                            <  1:337758/227‑1 (MQ=17)                                                                    aaaTGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTc                                                                                                                                                                             <  1:329620/251‑1 (MQ=255)                                                                    aaaTGATACGTCAGTGGGAGAGATCTCACTAAAAACTCGGGATAACGCCTTAAATGGCGAAGAAACGGTCTCAATAGGCTGCTTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGACAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCCGACAACGGTGAAATGTc                                                                                                                                                                             >  1:62536/1‑251 (MQ=255)                                                                         aTACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGt                                                                                                                                                                        >  2:38042/1‑251 (MQ=255)                                                                            cGTCAGTGGGAGAGATCTCACAAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGTAGACTACGGTGAAATGTCATTGTAtt                                                                                                                                                                     <  1:546040/251‑1 (MQ=255)                                                                                   gggAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGATTCATCCGAGAATAATTTCCCCGCGTATTCGCACCTTCCCGAACTAATCAATGCTTTGATTTTAAAGCCAGCTAAGAGGTGATGTTGTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGt                                                                                                                                                              <  1:653848/251‑1 (MQ=18)                                                                                      agagaTCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGttt                                                                                                                                                            >  1:225415/1‑250 (MQ=255)                                                                                      agagaTCTCACTAAAAACTGGAGATCACGCCTTCAAAGGCGAAGAAAAGGTCTAAACAGGCTGATTCAA‑GGCCTTCACGGGAGAAAAACTCGGCTCAAACATGAAGAAACGAAATGACTGAGTAAGCCGAGAAGAATGTCCACGCTTATTCGAACCTTACCTAACAAATCAATGCGTTGATTGTAAATCCAGCTATGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAAAGACAAGGAATTGTTACGtta                                                                                                                                                            >  2:364557/1‑249 (MQ=255)                                                                                        agagctcACTAAAAACTGGGGAGAACGCCTTAAATGGCGAAGAAACGGTCTAAAGAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCTCCTTCCCTAGCTAATCAAGGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAgg                                                                                                                                                         <  2:66372/247‑1 (MQ=255)                                                                                          aTCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATGTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTc                                                                                                                                                                             <  1:671578/229‑1 (MQ=255)                                                                                          aTCTCACTAAAAACTGGGGATAACAACTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTCCGGGAGAAAAAATCGGCTCAAACATGAAGAACTGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTACATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTc                                                                                                                                                                             >  2:671578/1‑229 (MQ=255)                                                                                              cACTAAAAACTGGGGATAACGGCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGTGAAAAAATCGGCTCAAACATGAAGAAATGAAATGGCTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAAGCAATGCGTTGAGTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTa                                                                                                                                                       <  2:638157/247‑1 (MQ=255)                                                                                              cACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGAATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACa                                                                                                                                                    >  1:297762/1‑250 (MQ=255)                                                                                               aCTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTGACGGGAGAAAAAAGCGGCTCAAACATGAAGAAGTGAAATGACTGAGTCAGCCGAGAAGAATGTCCCCGCTTATGCGCACCTGCCCTAACTAATCAATGCGTTGATTGTAAATCCATCTAAGAGGTGAGGTTTTCGGAGGAGACTACTGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAg                                                                                                                                                  <  1:635465/251‑1 (MQ=18)                                                                                                    aaaCTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGATGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCCAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGAGAGGTTTTCAGAGCAGCCAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAAtt                                                                                                                                             >  1:286267/1‑251 (MQ=255)                                                                                                     aactttggATCACGCCTTAAATGGCGACGAAACGGTCTAACTAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGCAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTTCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTACGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAAttt                                                                                                                                            >  2:66932/7‑251 (MQ=21)                                                                                                           ggATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGc                                                                                                                                      <  1:570669/251‑1 (MQ=255)                                                                                                               aaCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTGTAGGTAACAAGAAATTTGTCTGCACaa                                                                                                                                  <  1:599095/251‑1 (MQ=255)                                                                                                                 cGCCTTAAAGGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAgg                                                                                                                                <  1:356169/251‑1 (MQ=255)                                                                                                                  gCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAgg                                                                                                                                >  1:574165/1‑250 (MQ=255)                                                                                                                      tAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTa                                                                                                                            <  2:598108/250‑1 (MQ=255)                                                                                                                       aaaTGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTAca                                                                                                                          <  1:38042/251‑1 (MQ=255)                                                                                                                        aaTGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCAGTTACGGGAGAAAAAAGCGGCTCAAACATGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAAGTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACaattagtacat                                                                                                                         <  2:62536/251‑10 (MQ=255)                                                                                                                                   aaCGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATgg                                                                                                              >  1:528639/1‑251 (MQ=255)                                                                                                                                   aaCGGTCTAAATAGGCTGATTCAA‑GGCAGTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGATAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATgg                                                                                                              <  2:417118/251‑1 (MQ=255)                                                                                                                                       gTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAAGCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGaa                                                                                                          <  2:575011/251‑1 (MQ=255)                                                                                                                                              aaGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAg                                                                                                   <  2:467723/250‑1 (MQ=255)                                                                                                                                                ggCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTc                                                                                                 <  2:472924/251‑1 (MQ=255)                                                                                                                                                        cAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCCGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGaaa                                                                                          <  2:119114/250‑1 (MQ=255)                                                                                                                                                                     gggAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTtc                                                                             >  1:415870/1‑251 (MQ=255)                                                                                                                                                                                  ggCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAAACCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTttgtt                                                                <  2:225415/251‑1 (MQ=255)                                                                                                                                                                                   gCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTttgttg                                                               <  1:209823/251‑1 (MQ=255)                                                                                                                                                                                             gaagaaATGAAATGACTGAGTCAGCCGAGAAGAATTTCACCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTACATCCAGCTACGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTcc                                                     >  1:277973/1‑250 (MQ=255)                                                                                                                                                                                                           aCTGAGTCAGCCGCGACGAATTTCCCAGCTTATTCGCACCTTACCTCACTAATCAATGCGTTGATTGTCAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACACCGGTGAAATGTCATGGTATTGTTAAGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGATTTCATTATTGCGGCGTCg                                       >  2:326906/1‑251 (MQ=255)                                                                                                                                                                                                           aCTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCg                                       <  2:38484/251‑1 (MQ=255)                                                                                                                                                                                                              gAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGtt                                    <  1:128020/251‑1 (MQ=255)                                                                                                                                                                                                                                 tCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGAGTCGGTTGTGACTCGCGCGACCATcg                 >  2:42088/1‑251 (MQ=255)                                                                                                                                                                                                                                  ccccGCTTATTCGCACCTTCCCTAACTAATCAATGCGCTGATTGTAAATCCAGCTAAGAGGCGAGGTTTTCAGACCACACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAACTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAACTTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGAGACGGTAGTGACTCGCGCGACCATcgg                >  1:452657/1‑251 (MQ=255)                                                                                                                                                                                                                                         tATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGt          <  1:535202/250‑1 (MQ=255)                                                                                                                                                                                                                                              gCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATcggcgggggttt       >  2:460651/1‑242 (MQ=255)                                                                                                                                                                                                                                              gCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGa    <  1:460651/251‑1 (MQ=255)                                                                                                                                                                                                                                               cACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCCTCGGGGGCGTTTTAGa    >  2:256922/1‑250 (MQ=255)                                                                                                                                                                                                                                                 ccTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGAGAGCTTTTCAGAGCAGACCACGGTGAACTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCCTTATTGCGGCGTCGGTTGTGACTCGCGCGACCCTCGGCGGCGtttttggac  >  2:628684/1‑243 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                     GGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAA‑GGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGAAC  >  NC_000913/1396994‑1397482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.