| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,223,597 | 0 | C | T | 24.5% | 111.5 / 11.2 | 53 | R11K (AGA→AAA) | iclR | DNA‑binding transcriptional repressor IclR |
| Reads supporting (aligned to +/- strand): ref base C (4/36); new base T (13/0); total (17/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCATAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCA > NC_000913/4223358‑4223834 | ccATAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGGTTTTTTGCcggtttt > 2:161789/1‑246 (MQ=255) cgcCGATTGCCCAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTTTGCCGCCGTTCGCggggggggggggg > 2:192735/1‑241 (MQ=255) cgcCGATTGCCCAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCg < 1:495462/251‑1 (MQ=255) gCCCAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGCGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGAc < 1:5885/251‑1 (MQ=255) ccAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAg < 1:148597/251‑1 (MQ=255) aaTGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGtc < 1:427530/251‑1 (MQ=255) ggcccAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTGCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGtctc < 2:475682/248‑1 (MQ=255) cAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCttttt < 1:406645/251‑1 (MQ=255) aGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCAACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GGTTTTGCCGCGTTTCGCGGGGATGGG‑GGGGGCCCCGACAGACTCtttttt > 1:547219/1‑251 (MQ=255) gTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTGTCGCGTTTCGCGGGAATGGG‑GGCGGCCATGACAggtttttttttt > 2:492243/1‑240 (MQ=255) cGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTg < 1:370119/250‑1 (MQ=255) cGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGt < 2:150421/251‑1 (MQ=255) cAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑Tc < 1:301014/251‑1 (MQ=255) aCGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGCATTGGGTAACCCGGATTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCCTTTCGCGGGGATGGGGTG‑GACCCCGCCAGGCCCTTTTTTCTGTA‑Tctgggga > 1:248883/1‑244 (MQ=255) cGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTGCCGCGGTTTGCGGGGATGGG‑GGGGGCCCTGACCGTCTCTTTTTTTTGTA‑TCGTGGGAAtaatt > 1:350823/1‑251 (MQ=255) aaaCCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGc < 1:218168/209‑1 (MQ=255) aCCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTTCCGCGTTTTGCGGGGGTGGG‑GGGGGCCATGAACGTCACTTTTTTCTTTA‑TTGTgggaaatatttttt > 2:260188/1‑239 (MQ=255) ccggttgTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCGCTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGGCGCTGGTGCGGTGGCAACGACGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAAtcattttcatt < 2:317649/246‑1 (MQ=255) ccTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAAtcattttcatt < 1:476641/251‑1 (MQ=255) ccTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATGGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGTAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAAtcattttcatt < 1:584397/251‑1 (MQ=255) ccTGCTGTTGCATCGGGGGTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACCCTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAAtcattttcatt < 2:465916/251‑1 (MQ=255) gctgTTGCATCGGGGTTAGCAGGCGGTGGGTCGTGGGATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTTAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGGTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCAttttt < 1:486887/251‑1 (MQ=255) cATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCGGTCCAGTCGCGGGTGCGGTGGCATCGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGT‑TGCGACCATGACAGTCACTTGTTTCTGTA‑GCGTGGAAATCATTGGCATTTTTATTGTTa < 2:75531/251‑1 (MQ=255) aTCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCGTGTTGCGCCAGTTCCGGGAGTGC‑CACACTGCCATTGGATACGGCAATCCACTCCAGTAAGTCCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTTGTGCGGGGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TTCGACCAGGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAg < 2:154882/251‑1 (MQ=255) tGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTTTGCCGCGTTTTGCGGGGATGGG‑GGCGACCATGACAGTCTCTTTTTTTTGTA‑TCGTGGAAAt > 1:207123/1‑226 (MQ=255) tGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAAt < 2:207123/226‑1 (MQ=255) gTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATg < 2:449145/251‑1 (MQ=255) ggAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCACACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTGCCGCGGTTCGCGGGGATGGG‑GGGGGCCATGACAGGCTCTTTTTTCTTTA‑TTGTGGAAATCATTTTTATTTTTTTTGTTAGCTAATGCAATAGTTACTTGACTGAt > 1:156534/1‑251 (MQ=255) ggAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTTTTCCGCGGTTCGCGGGAATGGG‑TGCGACCCTGGCAGTCTCTTTTTTTTGTA‑TCGTGGGAATCATTTTCATTTTTTTTTTTAGCTAATGCAATAGTTACTTAACTGAtt > 1:93568/1‑250 (MQ=255) gAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATcc < 1:141708/251‑1 (MQ=255) gggTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTGCTGTA‑TCGTGGAAATCATTTTCATTTTGATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGa < 1:210166/251‑1 (MQ=255) aaCCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGtt < 1:297410/250‑1 (MQ=255) cGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CCCACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGATCCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGTG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGATTTAATGt < 1:438201/251‑1 (MQ=255) cGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTGCCCCGCTTTGCGGGGATGGG‑TGGGGCCATGACAGTACCTTTTTTTTTTT‑TCGTGGGAATCATTTTTTTTTTTTTTTTTATGTAATGCAATTGTTactgaaatacttcggtgagtttatat > 2:590923/1‑231 (MQ=255) gCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTg < 2:93568/251‑1 (MQ=255) gcCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAAtct < 1:260188/251‑1 (MQ=255) cAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTGGCGCGTTTCGCGGGAATGGG‑GGCGACCCAGACAGGCTCTTTTTTCTGTA‑TTGTGGGAATAATTTTTATTTTTTTTTTTAGCTAAAGCAATAATTACTCAACGGAACCGATGCGGTAAAGTTGAACAAAtatc > 1:433475/1‑247 (MQ=255) ccGTGAGGGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTTTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGtt < 2:88096/250‑1 (MQ=255) cTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGtc < 1:16443/135‑1 (MQ=255) cATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTGTTTCTGTA‑TCGTGGAAAGCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATTAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTAc < 1:593954/251‑1 (MQ=255) ggATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTGTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACcac < 2:547219/250‑1 (MQ=255) cggtaaTCCAGTCAAGTAATTTAAGGCAACGAGTTAAAGACTGAAGTTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑ATTTTTGCCGGGCTTCTCGGGGAAGGG‑GGCGAGCATGAACGGCTTTTTTTTTTGTA‑TTGTGGGGATTCTGTTTTTTTTTTTTTTTAGCTAATGCAATTGTTACTGAACTGATCTGGTGGGACAATGTTGGAAAAATTTCCTGTTTCGTGGGGGTCG‑GCTTTAACACAGaatc > 2:237121/5‑248 (MQ=255) ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCa < 2:280345/249‑1 (MQ=255) ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCAGt < 2:350823/251‑1 (MQ=255) cAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGGATGGG‑GGCGGCCAAGACAGGCTCCTTTTTTTGTT‑TCGTGGTAATAATTTTCATTTTTTTTTTTTTCTAATGCAATAGTTACTTAACTGATCCCATGGGTTTATGTTTAACAAAACTCATGTTTCGTGGTGGGCG‑CTTTTTCCCCCGATTCGTTTTTGcccggt > 2:148195/1‑247 (MQ=255) aaTTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTTGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCAGTATgg < 1:492243/250‑1 (MQ=255) ggCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTTGTGCGGTGGCAACGGCGGG‑TTTTCTGCCTCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCACTTTCATTTTTATTGTTAGCTAATGCAATAGTTACGGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGAGGCGTTTATGCCAGGATGGTGTGTTGa < 2:428535/251‑1 (MQ=255) ccACGCGTTAAAGACTGATCCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTGATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGTGTGGTGGTCG‑CTTTTTCCACAGATGCGTTTATGCCAGTATGGTTTGTTGAAt < 1:366376/251‑1 (MQ=255) gcgTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGGATGGG‑GGCGGACAAGACAGGCTCTTTTTTTTTTA‑TCGTGGGAATCATTTTTCTTTTTTTTTTTAGCTAATGCAATAGTTACTGAAATGATTCGATGAATTAATTTTTAACAAATCCCATATTGCGTGGTGGTCGTGTTTTCCCCCA‑ATGCGTTTTTGCCATGATGGTTTGTTGGAttttt > 2:450329/1‑251 (MQ=255) aaaGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTttatta < 1:192735/250‑1 (MQ=255) aaaGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑ATTTCTGCCGCGATTCGCGGGACAGGG‑GGCGACCATAACAGTCTCTTTTTTTTCTAATC‑TGGGAATTATTTTCATTTTTTTTGTTTGCTAATGCAATAGTTAATGAACTGATCCGCTGAGGTTATTTTGAAAAAATCTCATTTTGCGTGGTGGGCG‑CCTTTAACACAGATGCGTTTTTACCAGTATGGGTTGTTGAAatttttttt > 1:488719/1‑246 (MQ=255) aCTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑GTTTTTTCCCCGTTTCGCGGGGAAGGG‑TGCGGCCCTGACAGTCTCTTTTTTCTGTT‑TCGTGGGAATTCTTTTTATTTTTATTTTTATCTTATGCAATTGTTACTGAACTGCTTCGATGGGATTATTTTGTAAAAAACTCATTTTGGGTGGTGGGCG‑CTTTTTACACCGATGCGTTTATGCCCGTATGGTTTGTTTAATTTTTTTTAAATCt > 2:357152/1‑251 (MQ=255) aaCGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGagca < 1:450329/251‑1 (MQ=255) | CCATAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCAACCTGACGCACGAAACCCTGCTGTTGCATCGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGC‑CACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGG‑TTTTCTGCCGCGTTTCGCGGGAATGGG‑TGCGACCATGACAGTCTCTTTTTTCTGTA‑TCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCG‑CTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCA > NC_000913/4223358‑4223834 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |