| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,133,369 | 0 | C | T | 24.0% | 111.5 / 15.0 | 50 | E197K (GAA→AAA) | yghS | putative ATP‑binding protein YghS |
| Reads supporting (aligned to +/- strand): ref base C (4/34); new base T (12/0); total (16/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.50e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CATCACACCCGACCACCGCAATCAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCAGAAAGCCTT > NC_000913/3133122‑3133608 | cATCACCCCCGACCACCGCAATCAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTg < 2:91693/251‑1 (MQ=255) cacaCCCGACCACCGCAATCAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑aa < 1:453727/251‑1 (MQ=255) accGCAATCAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCTCCCGTTCCAGGATCTTTTCGCCCTTTAATG‑TCAGTTGCGGCGGAACGGGGATTTTTTTCTGT‑AACGCTGCCAGtt > 1:58668/1‑251 (MQ=255) agcAGCCCCGGAATGGAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTggtgg‑t < 2:498182/249‑1 (MQ=255) cAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑Tc < 2:232647/250‑1 (MQ=255) cAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGGGCAGCCATTCGTTAAATCAGCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑Tc < 2:242938/250‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTtcatc < 2:58668/251‑1 (MQ=255) cgGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTTGCCCCTCCCGTTCAAGGATCTTTGGGCCCTTGTATT‑TCCGTTGGGGCGTAACGGCGGTTTTTTTCTGT‑TACGCCTCCAGTTTGTGG‑GTGGGTTTACGCGCAAACCCGG‑tgtttttatt > 2:4809/1‑242 (MQ=255) aCTATTAACAGTTTGAGTTTGTAGTGGATCCATTCGTTAAATCATCCCCTATCCATTTTGGTTATCAGGAAAGCGCGGCGTGAATTCCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTTG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCa < 2:119514/251‑1 (MQ=255) cgtttAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCaa < 2:35786/248‑1 (MQ=255) aTTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCATCCAGTTCAAGGATCTTTTCGCCATTGAATG‑TCAGTTGCGGCGGAACGGCGATTTTTTTCTGT‑AAAGCTGCCCGTTGGTGG‑TCAGGGTTACGCGCAAACGAGG‑GTTTTTCATCAATGCCa > 1:316896/1‑248 (MQ=255) aaCAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGAGCTTTTCGCCTTTGAATG‑TCAGTTGCGTCGTAACGGCGATTTTTGCCTGT‑AACGCTTCCAGTTGGTGG‑TCAGTTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACg < 1:596656/250‑1 (MQ=255) ggttgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCTTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCTGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTTGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCATGACGAA‑Tca < 1:379007/249‑1 (MQ=255) tgagtttgTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCATACAGTTCCAGGAGTTTTTCGGCATTTAAAT‑TCAGGTGCGGCGTAAAGGCGATTTTTTTCTTT‑AAAGCTGGCCGTTGGGGG‑GTAGGTGTACGCGCCAAAACGG‑TTTTGTCATTAATGCCAAGACGAa‑acaac > 1:130809/1‑250 (MQ=255) gTAGTGCTTCCATTCGTTAAATCATCCCCGATCCAGTTTGGTGATCAGGAAAGCGCGGCGTGTGTTGCGCGTAGTGACGCTTGCAGAATTTCAGCGGCGGGGTGTCGCCCATCCAGTTCAAGGAGTTTTGCGCCAGTGAATG‑TCAGTTGCGGCGTAACGGCGATTGTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATTCggg < 2:427068/251‑1 (MQ=255) gCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCaaa < 1:575347/250‑1 (MQ=255) aTTCGTCAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCATCCAGTTCAAGGATCTTTGCGCCCTTGAATG‑TCAGATGCGGCGGAACGGCGATTTTTTTCTTT‑AACGCTGTCAGTTTGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCCCGACGAA‑TCAACAATAAGGGGAAATAAAATg > 1:154438/1‑251 (MQ=255) cGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCTCCAGTTTAAGGAACTTTGCGCCATTTGATG‑TCAGTTGCGGCGGAAAGGGGAATTTTTTCTGT‑AAAGCTGGCCGTTGGGGGGTC‑GGTTTAAGCGCCAAAGCGG‑GTTGTTCATTAATTCCAAGACGAA‑ATAACAAAACAGGCAAATAAGATGcc > 1:550542/1‑250 (MQ=255) gTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGGCGGCCATCCAGTTCAAGGATCTTTGCGCCCTTTGATG‑TCAGTTGCGGCGTAACGGCGATTTTTTTCTTT‑AACCCTGCCCGGTGGGGG‑TCAGGTTTTCGCGCAAACCCGG‑GTTGTTTTTCCATTCCAAGACGAAATCAAAAAAACGGGaaaaaaaaagcca > 1:402061/1‑241 (MQ=255) tAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGccatc < 1:597797/250‑1 (MQ=255) aaTCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGccatccat < 1:224822/251‑1 (MQ=255) atcatcCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTAGCCCATCCCGTTCAAGGGAATTTTCGCCCCTTAATG‑TTAGTTGCGGCGTAAAGGCGATTTTTTTCTGT‑AACGCTGCCAGTTGGGGG‑GCAGGGTTATGCGCAAACGCGG‑GTTTTTTATCAATGCCCAGACGAA‑ACAAAAAAACGGGCAAATAAAATGCCACCCAtt > 1:585825/1‑251 (MQ=255) ccccTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTAc < 1:51872/251‑1 (MQ=255) aTTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCATCCCGTTCAAAGATCTTTGCGCCATTGATTG‑GCAGTTTCGGGGTAACGGGGCTTTTTTTCTGT‑AACGCTTCCAGTTGGGGG‑GTAGGTTTACGCGCCAACGCGG‑GTTGTTCATCAATGCCCAGAAGAA‑ACAACAAAAAGGGGAAAAAAAAAGCCATCCATTGGTaaacctttaac > 1:105964/1‑241 (MQ=255) tttGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGCCCCTCCCGGTCAAGGGTCTTTGCGGCATTGAATG‑TCAGGTGCGGCGGAACGGCGGTTTTTTTCTGT‑AACGCTGCCCGGTGGTGG‑TGAGGTTTAAGCGCAAAAGCGG‑GTTGTTTATTAATGGCAAAAAGGA‑TCAACAAAAAGGGGAAATAAAATGGCATCCATTGGTACAACtttcgctc > 1:107704/1‑245 (MQ=255) ttGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTc < 1:402422/250‑1 (MQ=255) ttGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGGCGCCCCTCCCGCTCAAGAATTTTTTCGCCCCTGAATGGTC‑GTTGCGGCGGAACGGCGGTTTTTTTCTGTCAAC‑CTGGCCGCTGGTGG‑TCAGGGTTCCGCGCAAAACCGG‑GTTGTTTATCCAAGCACCGACACA‑ACTCCAATACCGGCAAATAAGAAGCCCTCCCTTGGGACAGCTTCAGCTcc > 1:587326/1‑250 (MQ=255) gATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTg < 1:407943/251‑1 (MQ=255) cAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCTGCGTAACGGCGATTTTTTCCTGT‑AACGCGGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑GTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGTTACAGCTGCAGCTCGCGCTGCCt < 2:591420/251‑1 (MQ=255) cAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGGGTCGGCCCCCCCGGTCCAGGGTCTTTTCGCCATTGTATG‑TCAGTTTCGGCGTAACGGCGGTTTTTTTCTTT‑TACGCTGCCAGTTGGGGG‑GCGGGGTTTCGCGCCAAAGCGGGTTTTTTATTCAAT‑CCAAGACGGA‑TCAACAATACGGGCAAATAAGATGCCATCCCTTTGTACAGCTTcctctcccgccgcct > 2:248612/1‑237 (MQ=255) gAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTaa < 1:228921/251‑1 (MQ=255) aaTTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAAc < 1:367201/251‑1 (MQ=255) aTTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAAcc < 1:408878/251‑1 (MQ=255) gtgcggaggggcgctatcAGAATTGCATCGGCGGGGTGTCGCCCATCCAGTTCAATGATGTTTGCGCCATTGAATG‑TTAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTTGTGT‑TGCGTGTTACGCGCAATCGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGTTGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAGCATTTTTATCCAACCGt < 2:453556/233‑1 (MQ=255) gcgcGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGtt < 1:105678/251‑1 (MQ=255) cgTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTAcc < 1:527705/251‑1 (MQ=255) gTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGccc < 1:248612/251‑1 (MQ=255) ggcggGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGc < 2:414839/251‑1 (MQ=255) gcggGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGcc < 1:42970/251‑1 (MQ=255) cTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTCATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCAATTCAACCt > 2:259759/1‑251 (MQ=255) ttGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATGTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCaa < 1:126453/246‑1 (MQ=255) tGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCACCAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGACTTAACATTTTTATCCAACCGTTACCACCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCg > 1:490307/1‑251 (MQ=255) aTTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGc > 1:453822/1‑251 (MQ=255) tGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGtgatga < 1:14210/250‑1 (MQ=255) gcggtgTAACGGCGATTTTTGCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTGTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGc < 2:130809/251‑1 (MQ=255) cggcgTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCa < 1:4809/251‑1 (MQ=255) aaCGGCGATTTGTTCCTGT‑AACGCTGCCAGGTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTGCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATGTTTATCCAACCGTTCCCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCAGAAAg < 2:556504/250‑1 (MQ=255) ggCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTCATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCAGAAAGCCtt < 1:259759/251‑1 (MQ=255) gATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCAGAAAGCCtt > 1:436031/1‑248 (MQ=255) gATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCAGAAAGCCtt < 2:436031/248‑1 (MQ=255) | CATCACACCCGACCACCGCAATCAGCCCCGGAATGTAGTTGGGCTGCGGCGCGGTTGTACTATTAACAGTTTGAGTTTGTAGTGCATCCATTCGTTAAATCATCCCCTATCCATTTTGGTGATCAGGAAAGCGCGGCGTGAATTGCGCGTAGTGACGCTTGCAGAATTTCATCGGCGGGGTGTCGCCCATCCAGTTCAAGGATCTTTGCGCCATTGAATG‑TCAGTTGCGGCGTAACGGCGATTTTTTCCTGT‑AACGCTGCCAGTTGGTGG‑TCAGGTTTACGCGCAAACGCGG‑TTTGTTCATCAATGCCAAGACGAA‑TCAACAATACGGGCAAATAAGATGCCATCCATTGGTACAGCTTCAGCTCGCGCTGCCTTAACATTTTTATCCAACCGTTACCGCCCGTGGTTTTTGCCAATTGCGGGCCATCAAAGCGAAACCCCGGCACTTCAACCTGCGGGTAGCGGTCGGTGATGAGCAGAAAGCCTT > NC_000913/3133122‑3133608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |