Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 75,758 1 bp→GC coding (1542/1656 nt) sgrR ← DNA‑binding transcriptional dual regulator SgrR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091375,7571.G97.1% 120.8 / ‑3.1 35coding (1543/1656 nt)sgrRDNA‑binding transcriptional dual regulator SgrR
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base G (19/15);  total (19/16)
Fisher's exact test for biased strand distribution p-value = 4.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01
*NC_00091375,7580TC97.1% 112.1 / ‑4.0 35P514P (CCA→CCG) sgrRDNA‑binding transcriptional dual regulator SgrR
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (19/15);  total (19/16)
Fisher's exact test for biased strand distribution p-value = 4.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01

TCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAA‑T‑GGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACA‑‑GAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATT  >  NC_000913/75534‑75998
                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                 
tCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGAcc                                                                                                                                                                                                                            <  2:49260/249‑1 (MQ=255)
          tATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGATGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTTGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCa                                                                                                                                                                                                                 <  1:187257/250‑1 (MQ=255)
           aTCCGGATCAGGCTCGACGGGCATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGCGTAGTGCTTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTACCATCGAACCAGCCGAGGGGATTCCTGCGTAGGCCGCGCCTACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGCTGCTGGCAcc                                                                                                                                                                                                               >  2:309588/1‑251 (MQ=255)
                caTCACGTTCGACGTGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTAAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAA‑TCGGCACCAATTCTTTGCTGGCGACCAGTTGCTGGCACCAGTTc                                                                                                                                                                                                          <  2:37404/250‑1 (MQ=255)
                   cAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGcc                                                                                                                                                                                                       >  2:183670/1‑251 (MQ=255)
                                  ttttCTCAGCGCCCGCGTACGCTTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCACCAATCATGGATCCGGTGGCTCAAACCACGCTGATTTAAAATCGACCCAGCCGAGGGTATTCATGCGTAGGCCGCGCTTACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCTCCAGTTCGCCAGGTTCATTTCGcc                                                                                                                                                                                         <  2:239882/250‑1 (MQ=255)
                                  ttttCCCAGCGCACGAGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGACTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCAGCGCATAATGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGCTGCTGGCAGCAGTTCGCCAGGTTCATTTCGcc                                                                                                                                                                                         >  2:269343/1‑250 (MQ=255)
                                    ttCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCAt                                                                                                                                                                                       <  1:119263/250‑1 (MQ=255)
                                                 cgtacgcgtGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTCTTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCgggcg                                                                                                                                                                         >  1:29321/1‑247 (MQ=255)
                                                      gcgttgctacccGTTGAGAACGGCGGGAGTGGAGTGATTTTGTTATCAACCAGCAATCATGGAGCCGTTGGCGCAAACCACTCTGATTTAAAATCTAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGTCCCTGAATGATCAGCCATTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTc                                                                                                                                                                    <  2:165380/242‑1 (MQ=255)
                                                                 cGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGt                                                                                                                                                         >  1:232164/1‑251 (MQ=255)
                                                                                   tgtagtgATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGGGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGtgtt                                                                                                                                       >  2:162704/1‑251 (MQ=255)
                                                                                   tgtagtgATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGtgtt                                                                                                                                       >  2:78875/1‑251 (MQ=255)
                                                                                           ttttGTTATCACCCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAACATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTcgatcggcatacagtgttggagcggc                                                                                                                               >  2:289549/1‑226 (MQ=255)
                                                                                             ttGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAgcg                                                                                                                              <  2:251152/250‑3 (MQ=255)
                                                                                                         aGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCaca                                                                                                                  >  2:297754/1‑248 (MQ=255)
                                                                                                                             cgcAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGaacagcgaaaaat                                                                                             <  1:56747/251‑12 (MQ=255)
                                                                                                                                         tGATTTAAAATCGCACCAGCCGAGGGTCTTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGAAAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAgcg                                                                               >  1:94868/1‑249 (MQ=255)
                                                                                                                                         tGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAgcg                                                                               >  2:209849/1‑249 (MQ=255)
                                                                                                                                          gATTTAAAATCGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAgcgt                                                                              <  1:21077/251‑4 (MQ=255)
                                                                                                                                          gATTTAAAATCGAACCAGCCGAGGGTATTCATGCGGAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGaacagcgaaaaatccagctgcagc                                                                                  <  2:293309/249‑23 (MQ=255)
                                                                                                                                                    cGAACCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGgc                                                                     <  1:155581/250‑1 (MQ=255)
                                                                                                                                                      aaCCAGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GACACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCt                                                                  >  2:160708/1‑251 (MQ=255)
                                                                                                                                                          aGCCGAGGGTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGtt                                                               >  2:78359/1‑250 (MQ=255)
                                                                                                                                                                 ggTATTCATGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGcc                                                          >  1:80356/1‑248 (MQ=255)
                                                                                                                                                                         tGCGTAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGCATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATcgctc                                               >  2:148301/1‑247 (MQ=255)
                                                                                                                                                                            gtaGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCACGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATcgctctcg                                            <  1:198389/249‑8 (MQ=255)
                                                                                                                                                                               gtccGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGAtc                                         <  1:264216/249‑1 (MQ=255)
                                                                                                                                                                                        tACTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GCAAAATCCAGCGGCAGCGTACAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCttc                                 >  2:94937/1‑248 (MQ=255)
                                                                                                                                                                                          cTGCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCttcatg                              >  1:174253/1‑246 (MQ=255)
                                                                                                                                                                                            gCGTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCttcatgc                             <  1:297754/250‑7 (MQ=255)
                                                                                                                                                                                              gTTGCCCCTGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGACCAGC‑‑GAAAAATCCAGCGTCAGCGTAAAGTTCGAGCTGTGCAGACAGATATCGCTCTCGATCTATCCttcatgtcac                          >  2:12568/1‑242 (MQ=255)
                                                                                                                                                                                                ggCCCCGGAATGATCAGCCAGTGGTG‑GATAAGC‑GGCACAATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCTTCATGCCACt                         <  2:174253/249‑1 (MQ=255)
                                                                                                                                                                                                       gAATGATAAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTGCGCCAGGTTCATTTCGCCACTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAA‑‑GTGCGAGAACAGCGAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGACAGATATCGCTCTCGATCTCTACTTCATGCCACTGATCGTa                  <  2:165493/250‑1 (MQ=255)
                                                                                                                                                                                                            aTCAGCCAGTGGTG‑GATAAGC‑GGCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCTTCATGCCACTGATCGTAgctgat            >  1:277000/1‑246 (MQ=255)
                                                                                                                                                                                                                     agtggtggataagcggCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCGCTCCTTCAGGCCACTGATCGGAGCTGATCTCTTTg     <  2:29321/237‑1 (MQ=255)
                                                                                                                                                                                                                       tggtggataagcggCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCTTCATGCCACTGATCGTAGCTGATCTCTTTGAt   >  1:113146/13‑251 (MQ=255)
                                                                                                                                                                                                                        ggtggataagcggCACCATTGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGGTTCATTTCGCCATTGCGCCAGCGGGCGGCGTCGGCTTGCCAGTCGATCGGAATACAGTGTTGGAGCAGCGGCACCTCGCACAAGTGCGCGAACAGC‑‑GAAAAATCCAGCGGCAGCGTAAAGTTGGCGCTGTTAAGCCAGATATCGCTCTCGATCTCTCCTTCATGCCACTGATCGTAGCTGATCTCTTTGAtt  >  1:152724/12‑251 (MQ=255)
                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                 
TCGCCGGCGTTATCCGGATCAGGTTCGACGGGTATTTTCTCAGCGCACGCGTACGCGTGGCACCCCGTTGAGAACGGCGTTAGTGTAGTGATTTTGTTATCAACCAGCAATCATGGATCCGGTGGCGCAAACCACGCTGATTTAAAATCGAACCAGCCGAGGGTATTCATGCGCAGGCCGCGCATACTGCGTTGCCCCTGAATGATCAGCCAGTGGTGCAATAA‑T‑GGCACCATCGCTTTGCTGGCGACCAGTTGCTGGCACCAGTTCGCCAGATTCATCTCGCCATTGCGCCAGCGAGCAGCGTCGGCTTGCCAGTCAATGGGAATGCAATGTTGTAGCAGTGGCACTTCGCATAAATGTGCGAAAACA‑‑GAGAAGTCCAGCGGCAGGGTAAAGTTGGCGCTGTTTAGCCAGATATCACTTTCGATCTCTCCTGTATGCCACTGATCGTAGTCGATCTCTTTGATT  >  NC_000913/75534‑75998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑