Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 69,611 G→A Y146Y (TAC→TAT araB ← ribulokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091369,6110GA100.0% 128.0 / NA 36Y146Y (TAC→TATaraBribulokinase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (14/22);  total (14/22)

ATCAAAGAAACTGGCTGGCGGCAGGCCGCCCCAGCTTTCGTGCCACAGAGATTTATGCCCGGCGCTGCAACGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAG  >  NC_000913/69377‑69835
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                 
atcaAAGAAACTGGCTGGCGGCAAGCCGCCCCAGCTTTCGTGCCACAGAGATTTATGCCCGGCGCTGCAACGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCa                                                                                                                                                                                                                    >  2:2122/1‑250 (MQ=255)
                             cccAGCTTTCGTGCCACAGAGATTTATGCCCGGCGCTGCAACGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGt                                                                                                                                                                                       >  1:34384/1‑250 (MQ=255)
                                    ttCGTGCCACAGAGATTTAGGCCGGGCGCTGCAACGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCCCCCAGTCGCACAGCTCAATCCACGAGGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACAATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAAtctc                                                                                                                                                                                 <  1:118187/249‑1 (MQ=255)
                                                           cGGCGCTACAACGCCCGGGACGAAAACCCGGGGGGGGGGGGGTACCGGAAGGCGGAGCGGGCCCCCAGTCGCACAGCTAAACCCACGGTGCGGCAGATGGCGCCACGGCGCTGTCCTGGAGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCGGAAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTgg                                                                                                                                                       <  2:195946/251‑1 (MQ=255)
                                                            ggCGCGGCAACGCCCGCGACGAATATCCTGCGGGCGGGTGGTCCCGGAAAGCAGGGCGGGCACCCAGTCGCACAGCTCAATCCACGAGGCGGCAGATGGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTGGCCAAGAACCATTCGCTGGAATAAATCCCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGt                                                                                                                                                      <  2:156720/251‑1 (MQ=255)
                                                              cgctacaactgcggggaagaATACCCTGCGGGGGGGTGGTACCGAAAAGCAGGGCTGGCCCCCAGTCGCACAGCGCAATCCACGAGGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCTTTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCt                                                                                                                                                    <  1:284529/233‑1 (MQ=255)
                                                               gcTGCAACGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCtt                                                                                                                                                   >  1:71551/1‑251 (MQ=255)
                                                                    aaCGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCcac                                                                                                                                              >  1:237129/1‑251 (MQ=255)
                                                                     ccgcccgggacgaATCTCCTGGGGGGGGGTGGTCCCGGAAAGCAGAGCTGCCACCCAGTCCCACAGCTAAACCCACGAGGCGGCAGATTGCGCCACGGCGCTGTCCGGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCGGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCcaca                                                                                                                                             <  2:78771/243‑1 (MQ=255)
                                                                                      cctggggggggggtgtACCGGAAGGGAGGGCTGGCACCCATCCCCACCGCTCAACCCGCGATGCGGGAGTGTGCGCCACGGCGCTGCCCTGGCGAGTCACATGAAGGTTTTTTGCCCAAAAACATTCGCTGAAAAAAATCCCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTc                                                                                                                            <  2:286239/237‑1 (MQ=255)
                                                                                         gcgggcggGTGGTACCGGAAAGCGGGGCTGGCCCCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCCCGGCGCTGTCCGGGCGAGTCACATGCAGGATTTTGGCCCAGACCCTTTCGCTGAAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCgg                                                                                                                          <  1:264497/250‑1 (MQ=255)
                                                                                         gcgggcggGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCggg                                                                                                                         >  2:88510/1‑251 (MQ=255)
                                                                                         gcgggcggGTGGTACCGAAAAGCAGAGCTGGCCCCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCgg                                                                                                                          <  1:78032/250‑1 (MQ=255)
                                                                                                ggtggtACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCgg                                                                                                                  >  2:123779/1‑251 (MQ=255)
                                                                                                 gtggtACCGAAAAGCAGAGCTGGCCCCCAGCCGCACAGCTCAATCCACGAGGCGGCAGATTGCGCCGCGGCGCTGCCCTGGCGAGTCACAGGAAGGATTTTTGCCAAGAACCATTGGCGGGAAAAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGc                                                                                                                 <  2:26001/251‑1 (MQ=255)
                                                                                                  gggtcccgaaaaccAGAGCTGGCACCCAGTCGCACAGCTCAATCCAGGAGGGGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCa                                                                                                                <  2:203206/238‑1 (MQ=255)
                                                                                                    gtACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCaa                                                                                                               >  1:227474/1‑250 (MQ=255)
                                                                                                     tACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCaaa                                                                                                              >  2:176116/1‑250 (MQ=255)
                                                                                                            aaGCAGAGCGGCCCCCCAGCCGCACAGCCAAATCCACGATGCGGAAGATGGCCCCACGGCGCTGCCCGGGCGAGTCACATGCAGTATTTTTGCCCAAAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGTAAACTCCGGgc                                                                                                      <  2:34384/251‑1 (MQ=255)
                                                                                                                      ggccccctgTCGCACAGCTCAACCCACGATGCGGCAGATTCCGCCACGGCCCTGTCCTGGGGAGTCACATCCAGGATTTTTGCCCAGAACCAATCGCTGAAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAg                                                                                            <  1:117766/243‑1 (MQ=255)
                                                                                                                                  cacacctcaacccacgcgggggCATATTGCGCCACGGCGCTGTCCGGGCGAGTCACATGAAGGTTTTTTGCCCAGAACCATTCGCTGGAAAAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTc                                                                                <  2:278539/231‑1 (MQ=255)
                                                                                                                                  cacaGCACAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGAAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTc                                                                                <  1:68198/251‑1 (MQ=255)
                                                                                                                                   acaGCTCAACCCACGATGCGGCAGATGGCCCCCCGGCGCTGTCCGGGCGAGTCACATGCAGGATTTTTGCCCAGACCCATTCGCTGAAAAAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCg                                                                               <  1:113877/251‑1 (MQ=255)
                                                                                                                                       cacaagccccgaggCGGCAGATGGCGCCGCGGCGCTGTCCGGGGGAGTCAAAGGCAGGTTTTTTGCCAAGAACCATTCGTGGGAAAAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCAt                                                                           <  2:194320/238‑1 (MQ=255)
                                                                                                                                          aaTCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGaa                                                                                                                                      <  1:5498/189‑1 (MQ=255)
                                                                                                                                          aaTCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGaa                                                                                                                                      >  2:5498/1‑189 (MQ=255)
                                                                                                                                          aaTCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCa                                                                         >  1:321564/1‑250 (MQ=255)
                                                                                                                                                          gctggcgcCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGAGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCCGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCg                                                         >  2:90245/5‑250 (MQ=255)
                                                                                                                                                                       cgcTTTCCTGGCGAGTCAAAGGCAGGTTTTTTGCCCAGAACCTTTCGCGGAAATAAAGACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCa                                           <  1:261349/251‑1 (MQ=255)
                                                                                                                                                                        ggtgtccgggcgagtaaaaggaagtaTTTTGGCCCAAAACCATCCGCGGAAAAAAATCCCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCaa                                          <  2:236684/226‑1 (MQ=255)
                                                                                                                                                                                ggctcttcacttgctgtttttttCCCCAGACCCTTTCGCTGGAATAATTACCGCCAATATAGCGGTAGTAGTCATCATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCATTGTGTTCTTTCCTCAATACGAACATCGCTTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCATTCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATc                                  <  1:220687/233‑1 (MQ=255)
                                                                                                                                                                                              aGGATTTTTGCCAAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTgc                    >  1:279493/1‑251 (MQ=255)
                                                                                                                                                                                                     ttcccaaGAACCTTGCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCTCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTg              <  1:150910/244‑1 (MQ=255)
                                                                                                                                                                                                         ccAGAACCATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCCCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCg          >  2:294091/1‑250 (MQ=255)
                                                                                                                                                                                                                catccGCTGGAATAAATCCCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAg  <  1:176116/247‑1 (MQ=255)
                                                                                                                                                                                                                cATTCGCTGGAATAAATACCGCCAATATAGCGGGAGTAGTCAACATTGCCCGGCGCGTGGCACACACGGGTAATCTCTTCGCTTCTTTCAACCGCAGTGTGGTCTTTTCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTACCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTa    >  1:201244/1‑249 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                 
ATCAAAGAAACTGGCTGGCGGCAGGCCGCCCCAGCTTTCGTGCCACAGAGATTTATGCCCGGCGCTGCAACGTCCGCGACGAATATCCTGCGGGCGGGTGGTACCGGAAAGCAGAGCTGGCACCCAGTCGCACAGCTCAATCCACGATGCGGCAGATTGCGCCACGGCGCTGTCCTGGCGAGTCACATGCAGGATTTTTGCCCAGAACCATTCGCTGGAATAAATACCACCAATGTAGCGGGAGTAGTCAACGTTGCCCGGCGCGTGGCACAAACGGGTAATCTCTTCCGCTTCTTCAACCGCAGTGTGGTCTTTCCACAATACGAACATCGCGTTCGGGTTTTCGGCAAACTCCGGGCGCAGCGCCAGCACGTTTCCGTCGGCATCAATCGGTGCGGGCGTCGAGCCGGTACTGTCAACGCCAATCCCGACCACAGCTGCGCGCTGTTCGACGCTAAG  >  NC_000913/69377‑69835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: