Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,353,837 IS2 (+) +5 bp coding (877‑881/1518 nt) lysU ← lysine‑‑tRNA ligase/Ap4A synthetase/Ap3A synthetase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)23 (0.730) 23/490 0.4 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 = 4353841 0 (0.000)coding (877/1518 nt) lysU lysine‑‑tRNA ligase/Ap4A synthetase/Ap3A synthetase
* ? NC_000913 4353837 =0 (0.000)39 (1.230) 35/492 0.1 100% coding (881/1518 nt) lysU lysine‑‑tRNA ligase/Ap4A synthetase/Ap3A synthetase
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

CAAAGATCTCTGTGACAATACGTCCCAACCCCCAGCTTTTCTCTACCGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAATCCAGAGCATTATGATGGGTAATAAACGGGCGAGCAGATGCCCCACCTGGAATTACCTGCAT  >  NC_000913/4353589‑4354087
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
caAAGATCTCTGTGACAATACGTCCCAACCCCCAGCTTTTCTCTACCGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTc                                                                                                                                                                                                                                                          <  1:83114/251‑1 (MQ=255)
          cggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTtcaatca                                                                                                                                                                                                                                                >  1:149658‑M1/239‑251 (MQ=255)
                aaTACGTCCCAACCCCCAGCTTTTCTCTACCGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGCGCGGAACAGTGACTATGTCAGtagactggccccct                                                                                                                                                                                                                                          <  1:41051‑M2/251‑15 (MQ=255)
                 aTACGTCCCAACCCCCAGCTTTTATCTACCGTAATACCGAGAGATTCAGCTAATGCGTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATAGTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGGGGAAATCAAACACATGCTCGCCAGAAGGGACTTTAGGGGTGGATATAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctg                                                                                                                                                                                                                                         >  1:34135‑M2/1‑236 (MQ=255)
                     ggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATc                                                                                                                                                                                                                                            <  1:131873‑M1/17‑1 (MQ=255)
                     ggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATc                                                                                                                                                                                                                                            >  2:131873‑M1/228‑244 (MQ=255)
                            cagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCAt                                                                                                                                                                                                                              <  1:72350‑M1/31‑1 (MQ=255)
                               agagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACg                                                                                                                                                                                                                           <  2:44506‑M1/34‑1 (MQ=255)
                                  gcttcgtgaacacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgcaacgggaatatctgcggcagagggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATAAACTCGTGGAAATCCGCATACGcc                                                                                                                                                                                                                         <  2:203060‑M1/36‑1 (MQ=255)
                                  gcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGcc                                                                                                                                                                                                                         <  2:139874‑M1/36‑1 (MQ=255)
                                       gtgaaaccgctaaagcgagcctacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGt                                                                                                                                                                                                                     <  2:207142‑M1/40‑1 (MQ=255)
                                           tACCGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccgatatcactt                                                                                                                                                                                                                <  1:23324‑M2/250‑41 (MQ=255)
                                             ccGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaa                                                                                                                                                                                                             >  1:239705‑M2/1‑208 (MQ=255)
                                                tAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaata                                                                                                                                                                                                           <  2:286654‑M2/250‑46 (MQ=255)
                                                    aCCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                                                                                                                                                                       <  2:62755‑M2/250‑50 (MQ=255)
                                                      cgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggtaattccaGTCAGTTCAATCAAATCGTGGTAAGCCGCATATGCCATGTAGAGTTCTATCATtgtg                                                                                                                                                                                                    >  2:178614‑M1/195‑251 (MQ=255)
                                                      cGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGACATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat                                                                                                                                                                                                     <  1:103665‑M2/250‑52 (MQ=255)
                                                       gcgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATtgtg                                                                                                                                                                                                    <  2:49497‑M1/57‑1 (MQ=255)
                                                         gactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTGCCATCATTGTGaa                                                                                                                                                                                                  >  1:272122‑M1/192‑250 (MQ=255)
                                                         gactacatcagtagcatgcccaaaccagacgggttaacggcagcaaagaaccttgcataggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGaa                                                                                                                                                                                                  >  2:317474‑M1/192‑250 (MQ=255)
                                                          actacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACt                                                                                                                                                                                                >  1:267226‑M1/191‑251 (MQ=255)
                                                           gATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTCCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTGAGTTGTACCCAGAACCTCTTGTGCCAGGGTTCGGAACAGTGACTCTGTCAGtagacttgcccccttgatctccagacaaccaatatcacttaaataagtgatagtctt                                                                                                                                                                                               >  1:141620‑M2/1‑194 (MQ=255)
                                                            aTTCAGCTAATGCGTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTGTTGGACGATATTTTTTGATGGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggggccctgaatctccagacaaccaatatcgcttaaataagtgatagtctta                                                                                                                                                                                              >  2:318478‑M2/1‑193 (MQ=255)
                                                                aGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                                                                                                                                                                          >  2:228099‑M2/1‑189 (MQ=255)
                                                                         tttAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                                                                                                                                                                  <  1:271904‑M2/250‑71 (MQ=255)
                                                                            ccaaaacagacgggttaacggcagcaaagaaccttgccgaggcgttcgcgcattataacgaatggcatccgcatagagcgctgggctatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatatcggggcaaatccaGTCAGTTCAATCAAATCGCGGTAATCCGCATAAGCCATGTAGAGCTCCATCATTGTGAACTCAGGATTAGGGCGAACa                                                                                                                                                                               <  2:23160‑M1/78‑1 (MQ=255)
                                                                                       gggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcataggtcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCa                                                                                                                                                                   >  2:281452‑M1/162‑251 (MQ=255)
                                                                                                            cttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGGACAGAAATACCTTCATTACGGAAGTTACGGTTGAtt                                                                                                                                              <  2:8515‑M1/111‑1 (MQ=255)
                                                                                                             ttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCACTCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGAttt                                                                                                                                             <  1:149624‑M1/112‑1 (MQ=255)
                                                                                                              tgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggaaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTc                                                                                                                                            <  2:35452‑M1/113‑1 (MQ=255)
                                                                                                               gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTc                                                                                                                                            >  1:304981‑M1/138‑250 (MQ=255)
                                                                                                                 tCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggcc                                                                                                                                         <  1:26969‑M2/251‑112 (MQ=255)
                                                                                                                 agaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGa                                                                                                                                          <  1:290904‑M1/115‑1 (MQ=255)
                                                                                                                          cgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatctaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTc                                                                                                                                <  2:219213‑M1/125‑1 (MQ=255)
                                                                                                                          cgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTc                                                                                                                                <  1:192118‑M1/125‑1 (MQ=255)
                                                                                                                           atTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGCAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgc                                                                                                                               <  1:279205‑M2/251‑122 (MQ=255)
                                                                                                                             tttttGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactaggcattggagaacagatgattgatgtcttagggccggagaaacgca                                                                                                                              >  2:3049‑M2/1‑128 (MQ=255)
                                                                                                                               attataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAAc                                                                                                                           <  2:100319‑M1/130‑1 (MQ=255)
                                                                                                                                   aTTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcg                                                                                                                       <  1:47349‑M2/251‑130 (MQ=255)
                                                                                                                                                ccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCAGGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACATAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACg                                                                                                           >  1:106771‑M1/105‑250 (MQ=255)
                                                                                                                                                        tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCACCTACAACCAGACGTTTCAGAt                                                                                                   <  2:211178‑M1/154‑1 (MQ=255)
                                                                                                                                                          cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGt                                                                                                                                                         >  1:224504‑M1/95‑194 (MQ=255)
                                                                                                                                                          cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGt                                                                                                                                                         <  2:224504‑M1/100‑1 (MQ=255)
                                                                                                                                                            cAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaatt                                                                                              >  2:271904‑M2/1‑97 (MQ=255)
                                                                                                                                                              gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagggataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATCCCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGc                                                                                              >  1:139874‑M1/91‑249 (MQ=255)
                                                                                                                                                                   atcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATTCCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGgcg                                                                                       >  1:206600‑M1/86‑251 (MQ=255)
                                                                                                                                                                           ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATCCCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGc                                                                               >  1:242004‑M1/78‑251 (MQ=255)
                                                                                                                                                                                      tctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATc                                                                    <  1:292783‑M1/185‑1 (MQ=255)
                                                                                                                                                                                       gCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatg                                                                   <  1:150002‑M2/251‑182 (MQ=255)
                                                                                                                                                                                          cGCCATAAGTGACTTTAGTGGTACCCAGATCCTCTTGTGCCAGGGTGCGGAACAGGGACTCTGTCAGtagactggccaccttaatctccagacaaccaatatcacttaaataagtgatagtcttaatactaggttttagactagtcattggagaacagatgattgatgtcttaagtccggagaaacgcagacggcgtaccacacagaaaaagatcgcaattgttcagcagagctttgaactggggatga                                                                  >  2:153364‑M2/1‑67 (MQ=255)
                                                                                                                                                                                             cATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtc                                                             <  1:27247‑M2/251‑188 (MQ=255)
                                                                                                                                                                                                 aGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccc                                                         <  1:170836‑M2/251‑192 (MQ=255)
                                                                                                                                                                                                       gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAATCCAGAGCATTa                                                    >  1:281754‑M1/50‑250 (MQ=255)
                                                                                                                                                                                                                   cAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatg                                       <  2:221009‑M2/251‑210 (MQ=255)
                                                                                                                                                                                                                          cagatgtctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAATCCAGAGCATTATGATGGGTAATAAACGGGCg                                <  2:117451‑M1/221‑1 (MQ=255)
                                                                                                                                                                                                                             tgtgCCAGGGTGCGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagca                               >  1:62755‑M2/1‑32 (MQ=255)
                                                                                                                                                                                                                                tctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACa                                                                                                                                                                               >  2:46171‑M1/25‑102 (MQ=255)
                                                                                                                                                                                                                                tctggaaatataggggcaaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACa                                                                                                                                                                               <  1:46171‑M1/78‑1 (MQ=255)
                                                                                                                                                                                                                                   ggaaagataggggcaaatccaGTCAGTTCAACCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATCCCTTCATTACGGAAGTTTCGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAAGCCAGAGCATTATGATGGGTAATAAACGGTCGAGCAGATGc                       >  1:117011‑M1/22‑251 (MQ=255)
                                                                                                                                                                                                                                         cGGAACAGTGACTCTGTCAGtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatt                 >  2:26969‑M2/1‑20 (MQ=255)
                                                                                                                                                                                                                                             gggcaaatccaGCCAGTTCAAACAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCAACATTGTGAACTCAGGATTACGGCGAACAGAAATACCTTCATTCCGGAAGTTACGGTTGATTGCGAATACCCGTTCAAAACCGCCTACACCCAGACGTTGCAGATACAGCTCCGGCGCCATACGCAGATACATATCTAAATCCAGAGCATTATGATGGGTAATAAACGGGCGAGCACAGGACCCACCTGGa             >  2:27083‑M1/12‑251 (MQ=255)
                                                                                                                                                                                                                                                 aaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAAcc                                                                                                                          >  2:45317‑M1/8‑138 (MQ=255)
                                                                                                                                                                                                                                                 aaatccaGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAAcc                                                                                                                          <  1:45317‑M1/131‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTCAGTTCAATAAAATCGGGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAATCCAGAGCATTATGATGGGTAATAAACGGGCGAGCAGATGCCCCACCTGGAATTACCTGcat  <  2:134015/251‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTCAGTTCAAACAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGTTTGATTTCGAATACCCGTTCAGAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAATCCAGAGCATTATGATGGGCAATAAACGGGCGAGCAGATGCCCCACCTGGAATTACCTGcat  <  2:223455/251‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
CAAAGATCTCTGTGACAATACGTCCCAACCCCCAGCTTTTCTCTACCGTAATACCGATAGATTCAGCTAATGCTTTAGCAGCATCAAAATTATCCAGGTCGGCCATATCGGTTTCTGGACGATATTTTTTGATTGCTTCGCGCATGGTGAGTTTTTCAAACGGTTTGCCGAAATCAAACACATGCTCGCCATAAGTGACTTTAGTGGTACCCAGAACCTCTTGTGCCAGGGTGCGGAACAGTGACTCTGTCAGTTCAATCAAATCGTGGTAATCCGCATACGCCATGTAGAGTTCCATCATTGTGAACTCAGGATTATGGCGAACAGAAATACCTTCATTACGGAAGTTACGGTTGATTTCGAATACCCGTTCAAAACCGCCTACAACCAGACGTTTCAGATACAGCTCCGGCGCGATACGCAGATACATATCTAAATCCAGAGCATTATGATGGGTAATAAACGGGCGAGCAGATGCCCCACCTGGAATTACCTGCAT  >  NC_000913/4353589‑4354087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.