| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,296,915 | C→T | A71T (GCG→ACG) | yjcO ← | Sel1 repeat‑containing protein YjcO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,915 | 0 | C | T | 97.0% | 106.7 / NA | 34 | A71T (GCG→ACG) | yjcO | Sel1 repeat‑containing protein YjcO |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (16/16); minor base G (1/0); total (18/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
AACCAAGCAGCATTTGGGCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGT > NC_000913/4296678‑4297144 | aaCCAAGCAGCATTTGGGCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGgcatcagc > 1:375234/1‑250 (MQ=255) ccAAGCAGCATTTGGGCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGgcatcagcatc > 1:388214/1‑251 (MQ=255) gcaTTTGGGCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCtt < 2:9071/251‑2 (MQ=255) aTTTGGGCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGCGGCGTTTTCTAAAAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACAAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGCACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTc > 1:21499/1‑251 (MQ=255) gCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCggcggc > 1:42621/1‑251 (MQ=255) ctcCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCgg > 1:391218/1‑251 (MQ=255) tCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGGCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGc < 2:418730/250‑1 (MQ=255) cGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGt > 1:216735/1‑251 (MQ=255) ggAGTATTTAACAGAATATGCGCCAGCGTTACTTCCCCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGAGAGTCCA‑GACTGACCTGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCGGTGCCCAATATTCGGCGTTGCTCAAAGCGGCGGAGCTAAACCAGCTGGCGGCAAGAAAAGATTGTGCGCTTCGTTcccc < 2:157284/250‑1 (MQ=255) gAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTcccc < 1:6792/250‑1 (MQ=255) tACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAGCTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGCTCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGATGTCGGCGGTTTCCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCctct < 1:487783/250‑1 (MQ=255) ccAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GGCTGACCGGATTGGTGAGTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCAGCGCCGCTGGCGGCGGCTGTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTctgct < 1:465713/251‑1 (MQ=255) atatGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTcccc > 1:248159/1‑236 (MQ=255) atatGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTcccc < 2:248159/236‑1 (MQ=255) gcCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAAt > 2:101823/1‑250 (MQ=255) tACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTg < 1:89050/250‑1 (MQ=255) aCCTTATTTACTGCCCGCTTGCGCCGCTTTCTATGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCAAGCAACGCGCAGGCATCAGAATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAACTGTCGGCAAGAAAATATTGTGCGCGTAGGTCCCCGGCCTCTGCTGCATTTCAATACTGGCTGCCAggtc > 1:141691/1‑249 (MQ=255) tactactcGCTTGAGCCGTTGTCTTTGCAAGAACTTTGTCTTGTGGATAGTCCATGA‑TGACCGGATTTGTGATTTTGATCTGCGCCAGCAGCGTTCAGGCATCAGCATCACCGCTGTCGGCGGCTTGCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGCGCTAAACCAGCTTGCGGCAAGAAAATATTGTGCGCGTGGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCATGCTCGGAGTc < 2:346834/243‑1 (MQ=255) gCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCGTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGGCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTg < 2:388214/251‑1 (MQ=255) cTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGCTTGGCGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAGTCGCCGGCGCTAAACCAGCTGTCGGCAAGAACATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGt > 2:221124/1‑249 (MQ=255) cTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAGTCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGGCGGGCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGt < 1:221124/249‑1 (MQ=255) tGCGCAGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTACACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGc > 1:331249/1‑251 (MQ=255) cgcTTTCTCTGCAAGACCTTTTGCTTGTGGATAGTCCA‑GACTGACCGGAGTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAATCCAGCTGGCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGa < 2:155204/251‑1 (MQ=255) gcTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTTATCTGCGCCAGCAGCGTGCAGGCATCAGCCTCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTTCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCTCGTCGGTCCCCGGCCTCTGCTGCCTTTCAATACTGGCTGCCAGGCTCGGAGTCGTTTGCGTGGGCAAAGa > 2:250658/1‑250 (MQ=255) tctGCAAGAGCCTTTACTTGTGGCTAGACCA‑GACTGACCCGATTGGACATTTTGATCTGCGCCCGCACAGGGCCGGCATCCACCTCAACGCTGTCGGTGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACAAGCTGTCGGAAAGAACAAATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGGCAGACTAGGAGTCGTTGGCGTGGGGAAAGAGTGTCa > 2:481699/1‑250 (MQ=255) aaGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCACGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAaac > 1:422695/1‑250 (MQ=255) gtgGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGAt > 1:343156/1‑250 (MQ=255) gtgGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATa < 2:343156/251‑1 (MQ=255) tgGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATa > 1:478620/1‑250 (MQ=255) a‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTGCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTTGTTTGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAt < 1:283982/251‑1 (MQ=255) a‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCAt < 2:112830/251‑1 (MQ=255) aTTGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCCTCAGCATCACCGCTGACGGCGGCTTTCTGTGCACAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGCAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTAAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATAc > 1:483236/1‑251 (MQ=255) tGGTGATTTTGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACg < 1:94274/250‑1 (MQ=255) ttGATCTGCGCCAGCAGCGTGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGt > 2:455460/1‑249 (MQ=255) | AACCAAGCAGCATTTGGGCATCGACGGCAGAGTCGTTCTCCAGATCTTCCGAGGCGTTTTCTAACAGCGAAATTGCCTTTGGATAATCCGGTTTACCCGCTTGAGTATTTACCAGAATATGCGCCAGCGTTACTTCACCTTCTTTACTGCCCGCTTGCGCCGCTTTCTCTGCAAGAACTTTTGCTTGTGGATAGTCCA‑GACTGACCGGATTGGTGATTTTGATCTGCGCCAGCAGCGCGCAGGCATCAGCATCACCGCTGTCGGCGGCTTTCTGTGCCCAATATTCGGCTTTGCTCAAATCGCCGGAGCTAAACCAGCTGTCGGCAAGAAAATATTGTGCGCGTCGGTCCCCGGCCTCTGCTGCCTTTAAATACTGGCTGCCAGGCTCGGAGTCGTTGGCGTGGGCAAAGAATGTCAAAAACAACATCAATGCGATAATTTTTTTCATTTTGATAATACGATTGGGT > NC_000913/4296678‑4297144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |