| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,630,340 | 0 | A | C | 33.3% | 72.2 / 16.4 | 59 | G61G (GGT→GGG) | ettA | energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base A (27/11); new base C (1/18); total (28/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.16e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCC > NC_000913/4630096‑4630587 | gTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTc < 1:20714/250‑1 (MQ=255) cgtgcAGATTATGTCCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTAAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATg < 2:429404/247‑1 (MQ=255) ttCAGATTATCACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTCCAGCGCATCCACTTCATCCAGGCGCTTCAGGGCGTCAACCACTTCTGCAACC‑GCTT‑CTTCAATGGACTCCCGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGCTAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTc > 2:122143/1‑251 (MQ=255) cAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCt < 1:167469/250‑1 (MQ=255) gATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTa < 2:192519/251‑1 (MQ=255) aTTATGATCGTCGTGAGCATGAATGATTTCTTCCAGACGGTCTTGTTCAGTGTCCAGCTTGTCAAAATCGGCATCTGGATCGGCGTACCGCGCATACACTTCATACATGCGTTTCAGGGCGGTAAACACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCCCGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCACTCTTGATGTCTGGC‑TGCGGACGCGCTTCCACTCCG‑CTGTCTTTAt > 2:163823/1‑251 (MQ=255) ttATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATc > 1:73435/1‑251 (MQ=255) gACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACGTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAAt < 2:73435/250‑1 (MQ=255) gACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGAGCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAAGGGACTCACGCACGGTGGGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTTGC‑TGCGGACTCTCGTCACCGTCG‑ATGTCGTTGTCAAt < 2:238555/250‑1 (MQ=255) tGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCAAGCTTGTCAAACTCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCAt > 1:60755/1‑251 (MQ=255) gAGCCTGAATGATCTCTTCCAGACGGCATTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCCTCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCAt > 2:471793/1‑250 (MQ=255) gAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATgcgc > 1:485678/1‑251 (MQ=255) aaaTGACCTCTTCCAGACGTCTTTGTTCAGCGGCCCGTTTGACAAAATGGGCACCCGGACCGGCGTACAGCGCATACCCTTCACCCAGGCGTTTCAGGGTTTTACCCACTTCTGAAACC‑GTTT‑CTTCAATGGACTCACGCACGTGGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCCCTTTCG‑ATGTCTTTATCAATGCCCGCCATAATgcg < 1:320130/249‑1 (MQ=255) aaTGATCTCTTCCGGACGGCCTTGTTCAGCGGCCAGCTTGTAAAAATCGTCATCCGGATCGGCGTACAGCGCATCCACTTCATCCAGCCGTTTCAGGCCGTTACCCACTTCTGAACCC‑TCTT‑CTTCAATGCACTCACCCACGGTGTGTTCCGGG‑TTCAGCTGGGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCCCCTTCG‑ATTTCTTTATCAATGCCCGCCATAATGCgca < 1:113596/251‑1 (MQ=255) ctctTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAggg > 1:33335/1‑251 (MQ=255) ctTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCGGAAACC‑GCTT‑CTTCAAGGGACTCCCGCACGGTGTGTTCCGGG‑TTCAGCTGCGTTTCCTGCGG‑CAGATAACCAATTTTGATGTCTGGC‑GGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAggg < 1:158697/249‑1 (MQ=255) cAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCATTGCCAGCCATAATGAGCAGCAGGGCGGACt > 1:382470/1‑251 (MQ=255) ggCCTTGTTCATCGGCCACATTATCACAATCCACATCCGGATCGGCGTACAGCGCATACCCTTCATCCAGGCGATTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGCTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCACTCTTGATGTCTGGC‑TGCGGACCCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCCGGGTGGACATAccc > 2:62585/1‑251 (MQ=255) ttGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCgcgc > 1:236368/1‑251 (MQ=255) cAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTc > 1:96111/1‑251 (MQ=255) cAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGAccc > 2:264578/1‑250 (MQ=255) cAGCTTGCCAAAATCGCCATCCGTTCCGGCGTCAAGCTCATACCCTTCATCCAGGCGTTCCAGGGCGT‑GACCACTTCTGAAACCCTCTC‑CTCCAAGGGACCCCCGCCCGGGTTGTTCGGGG‑TTCACCGGCGGTCCCT‑CGGTCAAATAACCAATTTGGAGGTCTGTC‑TGCTGACGCGCTTCCCCTTCG‑TTGTCTTTACCATTCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCa < 1:307186/251‑1 (MQ=255) agtttgtaaaaaccggcacgtggctCGGCGTACAGCGCATAACCTTCATCCGTGCTTTTCAGGGCGTTAACCCCTTCTGAACCC‑GTTT‑CTTCAATGGACTCCCGCACGGTGTGTTCGGGG‑TTCAGCTGCGTTTCCTGCGG‑CAGATACCCAATTTTGTTGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTTTTTACCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAg < 1:341363/227‑1 (MQ=255) cGGCACCCGGATCGGCGTACAGCCCATCCCCTTCACCCAGGCGTTTCAGGGCGTTACCCACTTCTGAACCC‑GCTT‑TTTCATTGTCCTCACGCACGGGGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATACCCAATCTTGATGTCGGGC‑GGCGGACGCGCTTCCCCTTCG‑TTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAAttttt < 1:55084/251‑1 (MQ=255) ccGGATCGGCGTACAGCCCAACCCCTTCACCCGGGCGTGTCAGGGCTTTCACCTCTGCTGAACCC‑GCTT‑CTTCAATGGACCCCCGCGCGGTGTGTTCCGGG‑TCCAGCTGCGGTCCCTGCGG‑CAGATAACCAATTTTGTTGTCTGGC‑TGCGGCCGCGCTTCACCTGCG‑ATTTCTTTATCAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCa < 2:96111/251‑1 (MQ=255) ccGGATCGGCGTAAACCGCTTCCCCTCCACCCGGGCGTTTCGGGGC‑TTTACCCCCTCCGAAACC‑CCTTTCTTCAAGGGACCCCCCCAGGGTGTGTCCCGGG‑TTCCGCTGCGTTTCCTGCGG‑CAGATACCCAATCTTGATGTCTGGC‑GGCGGCCGCGCTTCCCCTTCG‑ATGTTTTTACCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCa < 2:33335/251‑1 (MQ=255) gTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAAc > 1:200378/1‑251 (MQ=255) tACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGCAGAAACt > 2:255861/1‑251 (MQ=255) gacaccccatcctcTTCACCCAGGCTGTTCAGGGCTTCACCCTCTTCTGAAGCC‑GCTG‑CTTAAAGGGTCCCACGCACGGTGTGCTCCGGG‑TTCAGCTGCGGTTCCCGCGG‑CAAAAAACCAATCTTTATGTCTGGC‑GGCGGCCGCGTTTCCCCTTCG‑TTGTCTTTACCAACGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACt < 2:485678/238‑1 (MQ=255) gcATACCCTCCATCCAGGCTTTTCAGGGCTTTACCCCCTTCTAAACCC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TCCAGCTGCGTTTCTGGCGG‑CAAATAACCATTCTTGATGTCTGGC‑GGCGGACGCGCTTCCCCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCagaga < 1:403548/251‑1 (MQ=255) catccatttCAGCCAGGCGTTTCAGGGGGTAAACCCCTGCGGAAACC‑GCTT‑CTTCAAGGGACGCACGCCCGGTGTTTTCCGGG‑TTCAGCGGCGGTTCCGGCGG‑CAGATAACCAATCTTGTTGTCTGGC‑GGCGGACGCGCTTCCCCTTCG‑ATGTTTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCagagag < 1:420377/244‑1 (MQ=255) ccctccgggcttgtcggggCGTTAACCTCTGCTAAACCC‑GTTT‑CTTCAAGGGACTCACGCAGGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCGGCGG‑AAGATACCCAATCTTGATTTCTGGC‑GGCGGTCGCGTTCCCCCTTCG‑AGGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGttttt < 1:150890/235‑1 (MQ=255) caccgaggtgttctaGGGCGTTAACCTCTTCTTACCCC‑GCTG‑CTTCAATGGACCCACCCCGGGGGTTTTCCGGG‑TTGAGCTGGGGGTCCGTCGG‑CAGATAACAAATCTTGATGTTGGGCGTG‑GGAGGCGTGTC‑CCTTCGGTTTTCTTTACCACTGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCAGTCAGACCCAGGACAGCAGTGTTTGCCCCAGGGAAGAAACTCAGAGAGATGttttt < 1:21100/236‑1 (MQ=255) ccaggctttgcggggCTTTACCCACTTCTGAAACC‑TTTT‑CTCCAATGGCCCCGCGCTGGGGGTGTTCCGGT‑TTCAGCTGCGGTTCCTGGGG‑CAAATAACCATTTTTGAGGTCTGTC‑GGCGTGCGGGCTTC‑TCTTCGTATTTTTTTATCAAGCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCaaa < 1:215047/239‑1 (MQ=255) gggCGTTTCAGGGCTTTACCCACTTCTGAACCC‑GCTT‑CTTCAATGGCCTCACGCCCGGTGTTTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCCCCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCaa < 1:371643/247‑1 (MQ=255) aGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCaa > 2:371643/1‑248 (MQ=255) gctttcccgatctttAACCACTTCTGAAACC‑GCTT‑CTTCAAGGGCCTCACGCACGGTGTGTCCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCCCCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAata < 1:98596/237‑1 (MQ=255) taaaggCGTTCACCACTTCTGACACA‑GCTT‑CTTCAATGCACTCACGCACGGTGTGTTCCGGG‑ATCAGCTGCGGTTCCTGCGG‑CAGATAAACAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTCCCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCACAGGGAAGAAAATCAGAGAGATGTTTTTCAAAATATGACGt > 2:148652/5‑251 (MQ=255) aggtcGTTAACCGCTCTTGAACCC‑CCTT‑CTACAAGGGACCCCCGCAGGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACAAATCTTTATGTCTGGC‑GGCGGCCTCGCTTCCCCTGGG‑ATTTTTTTATCAAGGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGttt < 1:285629/247‑1 (MQ=255) ttAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAata > 2:98596/1‑237 (MQ=255) aaCCACTTCTGAAAAC‑GCTT‑CTTCAATGGACTTACGCACGGTCTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCATCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGAGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGCAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGa > 2:73876/1‑250 (MQ=255) gAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGcc > 1:258496/1‑251 (MQ=255) aaaCC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGAc > 2:364676/1‑168 (MQ=255) aaccccctt‑cttCAATGGACCCCCCCACGTTGT‑TTCCGGGGTTCAGCTGCGGTCCCTGCGG‑CAGATAACCAATCTTGATGTCGGGC‑TGCGGCCGCGCTTCCCCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGAc < 1:364676/162‑1 (MQ=255) agCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTTCCGacac > 2:249544/2‑251 (MQ=255) cctcaatggactccggccctgggttttCCGGG‑TTCGGGTGCGGTTCCGGCGG‑GAGAACCCCAATCTTGAGGTCTGGG‑TGGGGGCGCCCTTCCCTTTCA‑ATGTTTTTAAAAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATg < 2:258496/225‑1 (MQ=255) cgggTGTGTTCCGGG‑TTCGGCTGCGGTCCCTGCGG‑CAAATAACCATTCTTGTTGTCTGGC‑TGCGGCCGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTg < 1:255861/249‑1 (MQ=255) gtgtgtTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑TTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTcggc > 2:207502/1‑207 (MQ=255) gtgtCCCGGG‑TTCAGCTGCGTTTCCTGCGG‑CAGAAAACCAATTTTGATGTCTGGC‑TGCGGCCGCGCTTCCCCTTCG‑ATGTTTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGcc < 1:483959/250‑1 (MQ=255) gtTCCGGA‑GTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCAGGC‑TGCGGACGCGCTTAAACTTAG‑ATGTCTTTATCAATGCCCGCCATAATGAGCAGCAGGGTGGCATTACCCGCGCCATTCAGCCCCAGGGCACCAATTTATGCCCCAGGGCAGAAAATACGAGAGCTGTTTTTCACAATATAACGTTTCGGCGGAACAAATTTGCCGACACGATGCATGAGATAAAccaactacgccacg > 2:451917/1‑238 (MQ=255) ccGGG‑TTCAGCGGCGGTTCCTGCGG‑AAGATAACCATTCTTGATGTCTGGC‑TGCGGCCGCGCTTCACCTTCG‑ATGTTTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGtt < 1:52627/250‑1 (MQ=255) ccTGCGG‑CAGAGACCCATTCTTGATGTGTGGT‑CGCGGCCGCTTTTCCCCTGCG‑TGGTCTTTATAAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGGCCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTGTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACGCGAGTCATGGTATGAACTAATTGAGCCACGTTGGACTTCGCCTCTATGttt < 1:437393/251‑1 (MQ=255) g‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTg > 2:375803/1‑251 (MQ=255) ccattCTTGATGTCTGGC‑TGCGGCCGCGCTTCCCCTTCG‑ATGTCTTTACCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAg < 1:264578/247‑1 (MQ=255) c‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtg > 1:109091/1‑251 (MQ=255) tGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGCAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtgg > 2:279861/1‑250 (MQ=255) gggccgcgCTTCCCCTTCT‑ATGTTTTTACCACTCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAg < 1:477016/247‑1 (MQ=255) cGGACGCGCTTCACCTTCG‑ATGTCTTTATAAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGATCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAgtgt > 2:384811/1‑249 (MQ=255) ttCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTcc > 2:34664/1‑251 (MQ=255) | GTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTTAACCACTTCTGAAACC‑GCTT‑CTTCAATGGACTCACGCACGGTGTGTTCCGGG‑TTCAGCTGCGGTTCCTGCGG‑CAGATAACCAATCTTGATGTCTGGC‑TGCGGACGCGCTTCACCTTCG‑ATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCTCTATGTTTATCGTGATAATGAGTTTTCAAAGGCGAAGTGTAGCCTTTTTCC > NC_000913/4630096‑4630587 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |