Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,173,364 | 0 | C | . | 78.6% | 99.5 / 32.5 | 42 | intergenic (‑491/+918) | gatD/gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
Reads supporting (aligned to +/- strand): ref base C (1/8); new base . (27/6); total (28/14) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.93e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.54e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGAC > NC_000913/2173129‑2173606 | gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGCCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCcagc > 1:427833/1‑249 (MQ=255) gggTGTGCAAACCAATAGTTTGCGTCGCGATCAACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCgg > 1:296095/1‑250 (MQ=255) aaaCCAATAGTTTGCGTCGCGATCCACAGGGTGCTGCTCCTAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGCGTGGGATAAAAATCAGGCT‑TGCCGACACCACC‑‑GCCGTATGTCCCAGCAGCAACCCCGGATCAAGGcc > 2:272284/1‑251 (MQ=255) cAATAGTTTGCGTCGCGATCCCCAGGGTGAGGCTCAGAATGATGTCCCCGGTGATTAAGGTGCGGAACGGATTTCCTGGATGCACGGCGACCGCCAGCGCCTTGAAGAAGCCCAGGGTTGCAAGATCGTGAACGGGCGGCACGTGATTACCAGGCCCACAAACAGGAATTAAAATGGTGAGTGGGATAAAAAGCAGTCT‑TGCCGATGCGACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAATGCCAATc < 1:330164/251‑1 (MQ=255) cAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGCTTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGACGCAACGCCGGATCAAGGCCAATc > 2:362309/1‑251 (MQ=255) gTCGCGATACACAGGGTGCTGCTCATAATGATGACACCAGAGATTAAGGAGCGGAACAGATTTCCACGATGCACGGCGCCCGCCATCGCCACGAAGAAGACGATGGTGGCAAGATCGCCAAACGGCAGCAACTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGGGGGATAAAAATCAAGCT‑TTCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCt > 2:288989/1‑250 (MQ=255) cgATCCACAGGGTGATGCCCATAATGATGACACCCGGGATTAAGGTGCGGAACAGTTTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAGCGGCAGCACCTTATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAAGCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAc < 1:267529/249‑1 (MQ=255) aTGCTCATAATGATGACACCCGAGATTAAGGTGCGGACCAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTg > 1:440306/1‑251 (MQ=255) tAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGCTGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACg > 1:269468/1‑250 (MQ=255) agaTTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGCTTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCtt > 2:404728/1‑250 (MQ=255) ataaaGGGGCGAAACAGATTCCCCCGAGGCACGCCGACCGCCACCGCCACAAAGAAGCCGAGGGTGGAAAGATCGCCAAACGGCGGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGGGGAATAAAAATCAGGCT‑GGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACGCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGc < 2:341095/248‑1 (MQ=255) aGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATg > 2:84187/1‑251 (MQ=255) aaCAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTa > 1:69842/1‑250 (MQ=255) gttttCCACGATGCAAGAAGACCGCCATCGCCACGAATAAGCCGATGGCGGCAAGCTCGCCAAACGGCAACAACTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GACGAATGTCCCAGCAGCAACGCCGGATAAAGGCCAATCAGGAACTCATGACCGCCGAACTTCGCATGTAAAAGCCTACGAGCGTGCTTAGCGATGGGCGTTACAcc > 2:270319/3‑250 (MQ=255) attcccccgaggCACGGCGACCGCCATCGCCCCGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAAccat < 1:12615/240‑1 (MQ=255) aTTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAAAGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCACCGCCGGATCAAGGCCAAACAGGAACTCCTGACCGCCGCACTTCGCCTGTACACGACAACGAGCCTGCTTAGCGAGGGCCGTTAAAccat > 2:82499/1‑251 (MQ=255) cGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAACCGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCatgat > 1:402657/1‑251 (MQ=255) gACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGCACTTCGCCTGCAAACGACTACGAGCCCGCTTAGCGAATGGCGTTAAACCATCCATGATGGGTTT‑AAtac > 2:163115/1‑249 (MQ=255) gACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATc > 1:93825/1‑250 (MQ=255) gACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGAAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATc > 2:113709/1‑250 (MQ=255) aCCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCAc > 1:276968/1‑251 (MQ=255) gCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCg > 2:159209/1‑251 (MQ=255) aaaaacccgttggtggCAAGATCGCCAAAGGGCACCCCCTGATTACCCGCCCCACAAACAGCAATTAAAATGGTTTGTGGGATAAAAATCAGGTT‑GGCCGATAC‑‑CCCCGCCGTAGGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTagcag < 2:409048/241‑1 (MQ=255) aagCCGATGGTGGCAAGACCGCCAAACGGCAGCACCTGATTCCCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCAt < 1:343688/251‑1 (MQ=255) ccGATGGTGGCAAGACCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGAAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCAc < 1:45380/251‑1 (MQ=255) aaagagccccAACCGGCAGCACCTGTTCACCCGTCACACAACCAGCATTTAAATGGGTGAGTGTGAAAAAAACCGGGCT‑TGCCGATAC‑‑CTCCGCCGTATGTCCCAGCAGCAACTCCGGATCAAGGCCAACTAGGAACTCCTGTCCGCCGAGTTTCTCGTGTAAACGGCTACTAGCCTGCTTGGCGATGGGCGTTAAACCATGCATTA‑GGGTTTGAATCGCCCGTGGCATTAGCAGCATCACTGCCGCCGtt < 1:273818/243‑1 (MQ=255) gaccGCCAAACGGCATCCCCTGATTACCCGGCACAAAAACAGCAATAAAAGTGGGGAGTGGGATAAAAATCAGTCT‑TGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAAGCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGttttt < 1:402254/248‑1 (MQ=255) cccgcaaagcggcctcacctatgtACCCGGCCCAAAAACAGAAATAAAAAGGGGGAGGGGGATAAAAA‑CCTGCTGTGCGGATAC‑‑CCCCGCTGTCTGCCCCAGCAGCACCGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGTTTATCGATGTTCGTTAAACCATCCATGATGGGTTG‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTa < 2:159987/228‑1 (MQ=255) aCGGCAGCACCTGATTACCCGGCACACCAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCCGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGc > 2:408286/1‑251 (MQ=255) aCCTGATTACCCGGCACACAAACCGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGCCTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCACTac > 2:138448/1‑251 (MQ=255) ccTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATac > 1:261002/1‑250 (MQ=255) cccGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGAc > 2:201108/1‑251 (MQ=255) gCACAAAAACAGCACTTAAAATGGTGAGAGGGATAAAAATCAGGAT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCACCGCCGGATCAAAGCCAATCCGGAACTCCTGACCGCCGAACTTCACCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTACACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGACGTTTTTACCGCCAGCTGCAATACACCTTTGACATCg > 2:214656/1‑251 (MQ=255) acaAACAGCAATTAACATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTACACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGAATTAGAAGCATCACTGCCGCAGTTTTTACCGCAAGCTGCAATACACCTTTGACATCGTAAc > 1:337014/1‑251 (MQ=255) aaaaaCAGAAATAAAAAGGGTGAGTGGGATAAAAATCGGGCT‑TGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAAc < 1:404728/249‑1 (MQ=255) aaaGCAATAAAAAGGGGGAGTGGTATAAAAGTCGGCCT‑TGCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGACCTCCTGCCCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCcgc < 1:341676/249‑1 (MQ=255) cAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAgg > 2:392749/1‑251 (MQ=255) aTGGTGAGGGGAATAAAAACCAGGCT‑GGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAACCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGAt < 1:408286/251‑1 (MQ=255) aaaaaaaTCAGGTT‑GGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCAt < 1:392749/249‑1 (MQ=255) tAAAAATCAGGCT‑TGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATc > 1:85389/1‑251 (MQ=255) aaaaTCAGGCT‑TGCCGATACCACC‑‑GCCGTATGGCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATcac > 1:332121/1‑251 (MQ=255) t‑tGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTCCGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCTTTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCCTCACAAAACCCACg > 1:354145/1‑251 (MQ=255) gccggtccccccGCCGTATGTCCCGGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGGCCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCGGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTATCCCTCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGt < 1:397003/243‑1 (MQ=255) gataccaccgccgTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACACAACCCACGGTGAc > 1:230539/8‑251 (MQ=255) | GCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGATGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAATGGTGAGTGGGATAAAAATCAGGCT‑TGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTT‑AATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGAC > NC_000913/2173129‑2173606 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |