| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 836,654 | 0 | A | G | 34.7% | 72.7 / 15.8 | 49 | I102V (ATT→GTT) | hcxB | hydroxycarboxylate dehydrogenase B |
| Reads supporting (aligned to +/- strand): ref base A (8/24); new base G (17/0); total (25/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.20e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TCGTCAGATGGGTAGCGAGGAACAAGAAGCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCC > NC_000913/836410‑836896 | tCGTCAGATGGGTAGCGAGGAACAAGAAGCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTgag < 1:452843/250‑1 (MQ=255) cGTCAGATGGGTAGCGAGGAACAAGAAGCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGaa < 2:374344/251‑1 (MQ=255) agaagCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCACGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACCCTCGCTGGCGGTTGCGCCTTTGGTCAGGGCGCGGCCCAAGAAAGGATGGGGCTGGGGGTTGAGAAAGGGCATCCGCAAGGGATTgccg > 1:428401/1‑251 (MQ=255) gaagCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCCATTGCGATCGCGCATTTGGGCAGGGCGCGGGACATGAAGCGGTGGCGCTGGGGGTTTAGAAAACGCACCAGCACGGGATTgccgc > 1:43329/1‑251 (MQ=255) agCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCACGCTCGGTGGCGATCGCGCCTTTGGTCAGGTCGCGGCACATGAAGCGGTGGGGCTGGGGGGTGAGAAAGGGCATCAGCACGGTATTGgcgccg > 1:322198/1‑251 (MQ=255) gCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCCCATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCCAAACCGTTAAAGAGGCGGGGGCGGCGGGCAACCCCGCTGGGGATCGCGCCTTTGGTCAGGGCGCGGCACAAGAAGGCACGGGGCTGGGGGTTGAGGAAGGGCCTCAGCAcagatcggaggagg > 1:196887/1‑237 (MQ=255) gCGAAATTAGTTGCCGATCATTGAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGAGCGCGCATTTGGTCAGGGCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCAGCAGCAc < 2:196887/237‑1 (MQ=255) aaTTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGGGGGGGTCACGCCCGATGGCGATCGCGCATTTGGGCAGGGCGCGGCACATGAAGCGGTGGCGCTGGGGGTTGAGAAAGCGCATCAGCACGGGATTGCCGCCGGGgcg > 1:1510/1‑251 (MQ=255) aTCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGccgccg < 1:162537/234‑1 (MQ=255) tCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCACCCCCGATGGCGATCGCGCATTTGGTCACAGCGCGGCACATGAAGCGGTGGCGCCGGGGGTTGAGCAAGCGCCTCAGCACGGGATTGCCGCCGTGGCG‑CCACATAACTCGc > 1:402131/1‑251 (MQ=255) ccTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGATATGTACGCTCCTGGAGTCAGGAGCCCCTGCAAATTACCCATCATGCCAAAACCGTTAAAGAGGCGGGGGGGGCCGCCCCGACCGATGGGGTTCCCGCATTTGGGAAGGTCGGGGCACCTGAAGCGAAGGGGCTGGGGGGTGGGAGAACGCATCAAAACGGGACTGTCGCCGCGGCG‑CTACAAAACTccccacaacatggccgtgctg > 1:456895/1‑231 (MQ=255) aTGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTGAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCg < 1:176813/251‑1 (MQ=255) aTGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCCCGATGGCGATCGCGCCTTTGGTCAGGTGGCGGCACATGAAGCGATGGCGCTGGGGGTTGGGAAAGCGCATCAGCACGGTATTGCCGCCGGGGCG‑CTACATAAATCGCATCATATCGGCCGGATCGGTTTCTGGGGGGGGCAgggg > 1:220437/1‑248 (MQ=255) ggTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGtgtg < 1:348812/250‑1 (MQ=255) ggTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCAAGCCCGAGGGGGAACGCGCATTTGGGCAGGGCGCGGGACAGGAAGGGATGGGGCGGGGGGTTGAGGAAGGGGATCAGAACGGGATTGGCGCCGGGGGG‑CGACAAAAATCGCATCATATCGGCCGGATCGGGTACTGGGGGGGGCAGggtgg > 1:401122/1‑250 (MQ=255) aTTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAg < 1:234399/250‑1 (MQ=255) tGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCCCGCCCGCTGGCGATCGCGCCTTTGGGCAGGGCGCGGGACATGAAGCGGTGGCGCCGGGGGTTGAGAAAGCGCCTCAGCACGGGATTTCCGCCGTGGCG‑CTACATAACTCGCCTCATATCGGCCGGATCGGTTTCTGGGCggggccggggggagcgg > 1:21020/1‑236 (MQ=255) gATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATAGCGATCGCGCCTTTGGTCAGGGCGCGGCACCTGCAACGCTGGCGCTGGGGGTTGAGAAAACGCATCAACAAGGGATTTCCGCCGTGGCG‑CTAACTAACTCGCATCATATCGGCCGTATCTGTTACTTGGCGGGGGAGTGTGCAGCGGCggggg > 1:75935/1‑250 (MQ=255) aTCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTACAGAGGCGGGGGCGGCGGGAACGCCCGAACGCGGACGCGCCTTTGGTCAGGGAGCGGCACCTGAAACGGTGGGGCTGGGGATTGTGGAAGGGCCACAGCACGGGCTTGACGCCCTGGGGGCT‑CATAAATCGCATCATATCGGCCGCATTGGGTTCTGGGGGGGGCAGTGTGCAGCGGCgggggg > 2:27272/1‑249 (MQ=255) aTCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGtt < 1:88102/251‑1 (MQ=255) aTCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCCATTGCGATCGCGCCTTTTGTCAGGCTGCGGCACATTAAGCGATGGCGCTGGGGGTTGAGAAAGGGCATCAGCACGGGATTTCCGCCGGGGCG‑CTACATAAATCGCCTCATATAGGCCGTATCGGTTACTTGGCGGGGCAGTGGGCAGCGGCgggggt > 1:358469/1‑249 (MQ=255) cTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCACGCTCGATGGCGCTCGCGCATTTTGTCCGGGCGCGGCACATGAAGCGCTGGCGCCGGGGGTTGAGAAAACGCCTCAGCACGGGATTTCCGCCGTGGCG‑CCACATAACTCGCATCATATCGGCCGTATCGGGTACTGGGCGGGGGAGTGGGCAGCGGCggggggtgtttctt > 1:188294/1‑241 (MQ=255) tACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAACCCGTTAACGAGGCGGGGGCGGCGGGCACGCACGATCGCGATCGAGCCCTTGGTCCGGCCGCGGCAACTGAAGCGATGGACCAGGGGGTTGTGAAAGCGCATCAACCCCGAATTGCCGGCGTGGCG‑CTCAATCAATCGCATCATATCGGCCGTATCGGGTCCTGGGCGGGGCAGTGTGCCGCGGCggggggtgtttcttttccc > 1:442572/1‑236 (MQ=255) tACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCACGCCCGATGGCGAAAGCGCATTTGGTCAGGGCGCGGGACATGAAACGGTGGCGCTGGGGGTTGAGAAAACGCATCAGCACGGGATTGCCGCCCCGGGG‑CTTCATAACTCGCCTCCTATCGGCCGGATCGGGTTCTTGGCGGGGGAGGGTGGAGCGGCgggggtttttttttttccc > 1:476626/1‑236 (MQ=255) aCGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCAc < 1:404178/250‑1 (MQ=255) aCGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCACGCTCGATGGCGCTCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCCGGGGGTTGAGAAAGCGCATCAGCACGGGATTGCCGCCGTGGCG‑CTACCTAACTCCCATCCTATCGGCCGGTTCGGGTTCTGGGCGGGGGCGGGGGCAGCGGCggggggttgtttttttcccc > 1:293944/1‑235 (MQ=255) ccTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGtt < 2:293944/251‑1 (MQ=255) cTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGGCACGCCCGATGGCGATCGCGCATTTGGGCAGGGCGCGGCACATGAAGCGGGGGCGCTGGGGGTTGAGAAAGCGCATCAGCACGGGATTGCCGCCGGGGCG‑CTACATAACTCGCCTCATATCGGCCGGATCGGTTACTGGGCGGGGCAGGGGGCCGCGGCGGGGGTTGTTTCTAT‑CCAccttttttgagtgggggggatttc > 1:293705/1‑228 (MQ=255) aaTTAACCAACATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACGCGCATCATAGCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATgg < 2:75935/251‑1 (MQ=255) cAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATGCCAATGGTCGCGCCGTTCCACg < 1:82852/251‑1 (MQ=255) aaGAGGTGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGGTTTTTTTTATTCCCCTTTTTTAG‑GTGGGCGG‑GATTTCAATGGTCGCGCCGGTCCACGGGcgc‑ggacgg > 1:132129/1‑246 (MQ=255) gagGGGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCTCATGAAGCGATGGCGCGGGGTATTGAGAAAGCGCATCAGCACGGTATTGCCGCCTTGGCG‑CTACATAACTCGTATCATATCGGCCTTATCGGTTTCTGGGCTGATCAGTTTGTAGCGTCGGGTTTTGTTTCTAT‑TCTCTTTGTTAGCGTGGTCGT‑TATTCCAATGGTCGCGCCGTTCCACGTTCTC‑GACAGCCg < 2:472695/251‑1 (MQ=255) gCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCtt < 1:95875/251‑1 (MQ=255) cggTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGCTGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATAGGCCGTATAGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGGTTCTCTCTTT‑CCCCTTTTTTTGCGAGGTCGG‑GTTTCCAATTGTCCCGCCGCTCCCCGTTCGC‑GAccccacctttggccccca > 2:408039/1‑233 (MQ=255) cggTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGGTTGTCTCTAT‑CCACTTTGTTTGCGTGGTCGG‑GATTCCCATGGTCGCGCCGTTCCACGGGCGC‑GGCAGCCGCTTTGGCACCAAt > 1:196443/1‑251 (MQ=255) cACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACGTGAAGCGATGGCGCTGGGGATGGAGAAAGCGCATCAGCACGTTATTGCCGCCGTGGCG‑CTACATAGCTCTCATCATATCGGCCGTATCGTTTACTGGGCGGTGCAGTGTGCGGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGTTCGCGCCGTTCCACGGTCGC‑GGCAGCCGCTTTGGCACCAATCCg < 1:82225/250‑1 (MQ=255) cGATGGTGAGCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATAAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCtg < 2:89038/249‑1 (MQ=255) cGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCtgt < 1:28000/250‑1 (MQ=255) cGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCtg < 1:227487/249‑1 (MQ=255) aTGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCtgtgtg < 1:244366/251‑1 (MQ=255) tGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTTTTAGGGTGGTCGG‑GATTTCAATGGGCGCGCCGTTCCCCGGGCGC‑GAAAGCCGCTTTGGCCCCCATCCggtttgtggtg > 1:45193/1‑241 (MQ=255) ggcacgcgCATTTGGTCAGGTCGCGGCACATGAAGCTATGGCGCTGGGGATTGAGAAAGCGCATCAGCCCGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCCCTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGttt < 2:322198/247‑1 (MQ=255) gTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAG‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAAttt < 1:484024/251‑1 (MQ=255) acaTGAAGCGATGGCGCTGGGGATTGAGAAAACGCCTCAGCACGGTATTGCCGCAGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATAGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGGTTGGATCTAT‑CCACCTTGTTACCGTAGTCGGGAATTCCA‑TGGCCCCGCCGCTCCACGGTCGCCGA‑AGCCGCTCTTGCACCAACCAGTTCTGTGTGGGTTTCCCTCCTAAAGATAATTTccctctct > 1:71581/1‑246 (MQ=255) aGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTg < 1:402191/251‑1 (MQ=255) aGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑GATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTTGCACCAATCCGTTCTGTGTGGGTTTCCCTCGTAAAAATAATTTTCCGCTGTTGCTTg > 1:300285/1‑251 (MQ=255) gagggCGCTGGGGATGGAGAAAGGGCATCAGCACGGTATTGCCGCCTGGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGAtt < 2:62745/248‑1 (MQ=255) gATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑TCACTTTGTTAGCGTGGGCGG‑GATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GGCAGCCGCTTTGGCCCCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGAAAATTTCCCGCTGTTGCTTGAtt > 1:348890/1‑251 (MQ=255) ggttGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGcc < 2:150546/248‑1 (MQ=255) | TCGTCAGATGGGTAGCGAGGAACAAGAAGCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCG‑CTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTAT‑CCACTTTGTTAGCGTGGTCGG‑TATTCCAATGGTCGCGCCGTTCCACGGTCGC‑GACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCC > NC_000913/836410‑836896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |