New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	11 (0.230)	29 (0.660)	26/456	0.6	71.4%	coding (305/630 nt)	ycfK	protein StfP
	?	NC_000913	= 1209602	13 (0.300)					intergenic (‑483/‑83)	tfaE/pinE	putative tail fiber assembly protein TfaE/site‑specific DNA recombinase

GATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGG  >  NC_000913/1209367‑1209848                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                       gATCCTCCGTTGCATACCCCTGAATACTTACAACAAAACAAACTGTATCAATCCCACGCCCGTCATCCCAACCACGAACAACATCACCACGAACATCAGCCAATTTATTTGTCGGATAAGCCTTTGACAATTCCGGGAATTCTTCAGCAGACAACGCGGCACCATCGCATTTCAGCCAGCCTGTTGGCGGAGAGGCTGAAGACAACGGCACCGGCACACCAACAGGAAATGCAGAGCCTCATCCCAAAcc                                                                                                                                                                                                                                          >  1:61762/1‑250 (MQ=255)        cGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtttt                                                                                                                                                                                                                                  <  1:342145‑M2/251‑23 (MQ=255)                             tAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                                                                                                                                                                                               >  1:255275‑M2/1‑208 (MQ=255)                             tAAAATAGAGCGACATGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATACGCCTTTGCCAGTTCCGGGTATTCTTCAGCCGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccacaccaaggttttcgagagccgtttgcacagtgc                                                                                                                                                                                                             <  1:386342‑M2/251‑44 (MQ=255)                               aaaTAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcca                                                                                                                                                                                                           >  1:94602‑M2/1‑206 (MQ=255)                                       cGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCCCGAATAAACTCACCACGTAAATCCGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTACTGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattt                                                                                                                                                                                                   <  2:204907‑M2/251‑54 (MQ=255)                                               aTCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgc                                                                                                                                                                                           <  1:73975‑M2/251‑62 (MQ=255)                                               aTCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                                                                                                                                                            <  1:367485/250‑1 (MQ=255)                                                         cgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGCTAAGCCTATGCCAGTTCCGGGCATTCTTCAGCCGAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggcat                                                                                                                                                                                 <  1:167067‑M2/251‑72 (MQ=255)                                                          gcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcgcagtgccatccgatttgatatcgccaaacggattc                                                                                                                                                                                <  1:369110‑M2/251‑73 (MQ=255)                                                             cgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg                                                                                                                                                                             >  1:455448‑M2/1‑176 (MQ=255)                                                              gTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                                            <  1:163172‑M2/251‑77 (MQ=255)                                                              gTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggggg                                                                                                                                                                             >  2:287045/1‑250 (MQ=255)                                                                cATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATGCTTCAGCAGAAAAAGCGGCGCCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGTACAGCAACAGGTAATTCAGAGCCTTCTTCGAATCCAGCGTGTATGAAAAGGAAGAAAGAACAATCAAATGGCATCATTCGGGCTTTTACCAGGGGGAtt                                                                                                                                                                          <  2:195531/251‑1 (MQ=255)                                                                      aGCCACGAATAAACTCACCACGTAAATCAGGCCATTTATTTGCCGGATAAGCCTTTGCCAGTTCCGGGCATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGACGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                                                                                                                                                    >  1:44889/1‑251 (MQ=255)                                                                                                                   gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttc                                                                                                                       >  2:163172‑M2/1‑122 (MQ=255)                                                                                                                         ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACa                                                                                                                 <  2:96469/251‑1 (MQ=255)                                                                                                                             tGCCAGTTCCGGGTATTCTTCAGCAGAAACAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCAGAGTGGCTGAAGGCCACGGAACCGGGACACCACCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGt                                                                                                             >  2:386248/1‑251 (MQ=255)                                                                                                                                cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCCTTGCATTTCAGCCAGCCTGATGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcac                                                                                                          <  1:418789‑M2/251‑143 (MQ=255)                                                                                                                                cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAACAACAGGTAATGCAGAGccttatcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcaccttctccaggctggcac                                                                                                          <  1:396657‑M2/251‑143 (MQ=255)                                                                                                                                 aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcacc                                                                                                         <  2:291588‑M2/251‑144 (MQ=255)                                                                                                                                 aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGAACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCCCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccacggttttcgcgagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcatgccgccccttctccaggctggcacc                                                                                                         <  2:163113‑M2/251‑144 (MQ=255)                                                                                                                                      cGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgcagagcggtaagtaactggtcgtgccgccccttctccaggctggcacaggatg                                                                                                    <  2:2056‑M2/251‑149 (MQ=255)                                                                                                                                           aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctcc                                                                                               >  2:38174‑M2/1‑98 (MQ=255)                                                                                                                                                   gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgcttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgct                                                                                       <  1:228304‑M2/251‑162 (MQ=255)                                                                                                                                                    cagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattct                                                                                                                                                                               <  1:266271‑M2/162‑74 (MQ=255)                                                                                                                                                    cagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAGGCAGAGccttctcccaaaccaaggttttcgagagccgttggcacagtgccatccgatttgatatccccaaacggattct                                                                                                                                                                               >  2:266271‑M2/1‑89 (MQ=255)                                                                                                                                                                        cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGAc                                                                   >  1:327486/1‑250 (MQ=255)                                                                                                                                                                          tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACa                                                                  >  1:473824/1‑249 (MQ=255)                                                                                                                                                                                 cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCg                                                         >  1:225921/1‑251 (MQ=255)                                                                                                                                                                                         tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatca                                                  >  1:291588‑M2/1‑52 (MQ=255)                                                                                                                                                                                           gCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTc                                               <  1:386248/251‑1 (MQ=255)                                                                                                                                                                                                  ggCTGAAGGACACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcgtgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcg                                         >  1:204907‑M2/1‑43 (MQ=255)                                                                                                                                                                                                       aaGGCCACGGAACCGGGACACCCACAGGTAATGCCGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcacagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggc                                    <  2:289137‑M2/250‑213 (MQ=255)                                                                                                                                                                                                         ggCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcagg                                 <  1:66446‑M2/251‑216 (MQ=255)                                                                                                                                                                                                              cGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGaaa                            <  1:287045/251‑1 (MQ=255)                                                                                                                                                                                                                 aaCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGaaaaa                          >  1:245499/1‑250 (MQ=255)                                                                                                                                                                                                                      ggACACCAACAGGTAATGCAGAGccttctcccaaaaaaaggttttcgagagccgtttgcacagagccatccgatttgatatcgccaaacggattcttgcagcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaacgttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgg                    <  1:38115‑M2/251‑229 (MQ=255)                                                                                                                                                                                                                       gACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctggg                   <  1:55454‑M2/251‑230 (MQ=255)                                                                                                                                                                                                                       gACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctg                                                                        <  1:92893‑M2/198‑177 (MQ=255)                                                                                                                                                                                                                       gACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctg                                                                        >  2:92893‑M2/1‑22 (MQ=255)                                                                                                                                                                                                                                       gCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGc     >  1:14668/1‑249 (MQ=255)                                                                                                                                                                                                                                        cAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgggggttaccacgggtaaaa  >  2:73975‑M2/1‑5 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                       GATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGG  >  NC_000913/1209367‑1209848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.