Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 306,101 IS2 (–) +5 bp coding (713‑717/1644 nt) ecpD ← fimbrial adhesin EcpD

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 306101 =0 (0.000)35 (0.750) 34/488 0.4 100% coding (717/1644 nt) ecpD fimbrial adhesin EcpD
?NC_000913 381260 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 3061050 (0.000)41 (0.880) 40/486 0.2 100% coding (713/1644 nt) ecpD fimbrial adhesin EcpD
?NC_000913 = 382590 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

TCATCTCGTTGAAGGTGTAGTAATAGGCGGTATTGCTCACCGGTTTCCATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATTTGTTGCATATACTGGTAAAACGCGTCTGACAACATGCC  >  NC_000913/305857‑306349
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    
cttacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcaggtggccagtctaCAGAGTc                                                                                                                                                                                                                                                    <  1:370470‑M1/7‑1 (MQ=255)
    cgcccgagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaccaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattgattgtctggagattcagggggccagtctaCAGAGTCGGt                                                                                                                                                                                                                                                 <  1:50982‑M1/10‑1 (MQ=255)
     gccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTAc                                                                                                                                                                                                                                               <  1:123025‑M1/12‑1 (MQ=255)
          gAAGGTGTAGTAATAGGCGGTATTGCTCACCGGTTTCCATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgccc                                                                                                                                                                                                                                           <  2:261906‑M1/250‑12 (MQ=255)
                                caccatgatgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGc                                                                                                                                                                                                                    <  1:120137‑M1/39‑1 (MQ=255)
                                 tGCTCACCGGTTTCCATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatc                                                                                                                                                                                                                   >  1:91493‑M1/1‑216 (MQ=255)
                                 tGCTCACCGGTTTCCATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttat                                                                                                                                                                                                                    <  2:290436‑M1/250‑35 (MQ=255)
                                 tGCTCACCGGTTTACATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCACTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatc                                                                                                                                                                                                                   >  1:256569‑M1/1‑216 (MQ=255)
                                  gCTCACCGGTTTCCATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGGTTTCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggagttgcccctatatttccagacatctgttatca                                                                                                                                                                                                                  <  1:231353‑M1/251‑37 (MQ=255)
                                            gggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGt                                                                                                                                                                                                        >  1:382043‑M1/201‑251 (MQ=255)
                                               cATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                                                                                                                                     <  2:230410‑M1/251‑50 (MQ=255)
                                                 tGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattaca                                                                                                                                                                                                    >  1:220527‑M1/1‑200 (MQ=255)
                                                   aaCTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttcacccattacaagc                                                                                                                                                                                                 >  1:318451‑M1/1‑198 (MQ=255)
                                                    aCTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc                                                                                                                                                                                                >  1:423874‑M1/1‑197 (MQ=255)
                                                       gagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAAcc                                                                                                                                                                                             >  1:55452‑M1/190‑251 (MQ=255)
                                                            tCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg                                                                                                                                                                                        >  1:405599‑M1/1‑189 (MQ=255)
                                                             gtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGAt                                                                                                                                                                                       >  1:294806‑M1/184‑251 (MQ=255)
                                                             gtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGAt                                                                                                                                                                                       >  2:16853‑M1/184‑251 (MQ=255)
                                                             cAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                                                                                                                       >  2:467105‑M1/1‑188 (MQ=255)
                                                                          caaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCg                                                                                                                                                                           >  1:459768‑M1/171‑250 (MQ=255)
                                                                           aaagctctgctgcacaattgcgatcttttcctgtgtggtacgccgtctgcggttctccggccctaagccctcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGGTGATAAATACTTCCGCCCGCGCGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGt                                                                                                                                                                          <  2:31529‑M1/81‑1 (MQ=255)
                                                                              cGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                                                                                                                                                                       <  2:91493‑M1/250‑80 (MQ=255)
                                                                                 aCGCCCCGACGGCAGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGCGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCGGCCGATGGGTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggagttgcccctatctttccagacatctgttatcacttaacccatcacaagcccgctgccgcagatattcccgtggcgagcg                                                                                                                                                                   >  2:321065‑M1/1‑168 (MQ=255)
                                                                                   gctgaacaattgcgatctttgcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTg                                                                                                                                                                   >  2:364403‑M1/162‑249 (MQ=255)
                                                                                       cGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                                                                                                                             <  2:231611‑M1/251‑90 (MQ=255)
                                                                                       cGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc                                                                                                                                                             >  1:190389‑M1/1‑162 (MQ=255)
                                                                                        acaagtgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGc                                                                                                                                                            >  2:5550‑M1/157‑251 (MQ=255)
                                                                                         aCGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccca                                                                                                                                                           <  1:467105‑M1/251‑92 (MQ=255)
                                                                                                 ggCTAACGACGAGTTGGCGATCGCCGGGAATAAATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGAATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTAGCCGTTCCCTTCGCCCAGAGcggctttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcact                                                                                                                                                    >  1:271322‑M1/1‑152 (MQ=255)
                                                                                                  gCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactat                                                                                                                                                  >  1:180357‑M1/1‑151 (MQ=255)
                                                                                                           gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCgg                                                                                                                                          >  2:200478‑M1/138‑250 (MQ=255)
                                                                                                              tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttcagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGCACATACCAGTTGCCGGAGGc                                                                                                                                      <  2:91851‑M1/117‑1 (MQ=255)
                                                                                                               tGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCAGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGgggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgatcacccagcgccctaagcggaggcacttc                                                                                                                                     >  2:373527‑M1/1‑138 (MQ=255)
                                                                                                                gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCt                                                                                                                                    >  2:466145‑M1/133‑251 (MQ=255)
                                                                                                                       gtctgcgtttatccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggacagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGAATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACCTACCAGTTGCCGGAGGCCTGATCCtt                                                                                                                             <  2:455682‑M1/126‑1 (MQ=255)
                                                                                                                       gCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTGAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat                                                                                                                             <  2:236195‑M1/251‑122 (MQ=255)
                                                                                                                       cgtcgccgtttctcggcccttagtaatcaatcctccgttccccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCtt                                                                                                                             >  2:263452‑M1/126‑251 (MQ=255)
                                                                                                                              tttctccggccctaagacatcaatcatctgttatccaatgactagtctaaaaaatagtattaagactatcacttatttaagtgatctaggttgtctggagattcagggggccagtctaCAGAGTCGGTCCTCCGTAGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGt                                                                                                                      <  1:271732‑M1/133‑1 (MQ=255)
                                                                                                                              atatatGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagtggtaacccagcgcactatgcggatgccattcgttataattctcgaa                                                                                                                      <  2:423874‑M1/251‑129 (MQ=255)
                                                                                                                                   gggaTTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct                                                                                                                 <  2:161240‑M1/250‑134 (MQ=255)
                                                                                                                                         gAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAATTTAATCCTGAACGGCTGCCGATGGTTGGCGGCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgatagcccagcgcactatgcggattccagtcgttataatgcacgaacgcctctgca                                                                                                            <  2:178267‑M1/250‑139 (MQ=255)
                                                                                                                                         ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCgctgct                                                                                                           <  2:51300‑M1/144‑1 (MQ=255)
                                                                                                                                             tgtTGCTGCGTCCGTTTGTCTGCAGGGTATAGTTAACCATCTTACAACTTAATCATGAACGGCTGCCGATGGTTTGCGTCCGGCCGTCAGCGCTCACTTCGCCCAGAGtggatttgcccctatctttccagacatctgttatcacttaacccattccaagcccgctgccgcagatattcccgtagcgcgcgataacccagcgcactatgcggatgccattcgttctcatgctcgaacgcctctgcaaggat                                                                                                       >  2:293468‑M1/1‑108 (MQ=255)
                                                                                                                                                      catctgttctccaatgattagtctaaaaactagtattaagactaactcttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGAGAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTTATCCGTTCAGCGTGCGCCGCTGCTGGCGTCATAGTTc                                                                                              >  2:312096‑M1/95‑251 (MQ=255)
                                                                                                                                                      catctgttctccaatgactagtctaaaaactagtattaagactatcccttatttaagtgatattggttgtctggagattcagggggcaagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTc                                                                                              <  1:312096‑M1/157‑1 (MQ=255)
                                                                                                                                                        tctgttctccaatgactagtctaaaaactagaattaagactatcacttatttaagtgatattggttgtctggagattcagggggcccgtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTcac                                                                                            <  1:289926‑M1/159‑1 (MQ=255)
                                                                                                                                                         cGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGCACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgcttccgcagatattcccgtggcgagcgataacccagcgccctatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgt                                                                                           >  2:178046‑M1/1‑96 (MQ=255)
                                                                                                                                                              gtttgCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGTCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacc                                                                                      <  1:249409‑M1/251‑161 (MQ=255)
                                                                                                                                                                 caatgactagtctaaaaactagtattaagactatcacttatttaagtgctattggttgtctggagattcagggggccagtctaCAGAGTCGGCACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTg                                                                                   <  1:461290‑M1/168‑1 (MQ=255)
                                                                                                                                                                           aGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgg                                                                          <  2:45077‑M1/250‑173 (MQ=255)
                                                                                                                                                                            gTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttcacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggc                                                                        >  2:354261‑M1/1‑77 (MQ=255)
                                                                                                                                                                              tAACCATCTTACAACTTAATCCGGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatgcccgtggcgagcgataacccagcgcacgatgcggatgccagtcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccggctggtttgggca                                                                       <  2:245959‑M1/250‑176 (MQ=255)
                                                                                                                                                                              aaaaactagcattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGCGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATg                                                                      <  2:73543‑M1/181‑1 (MQ=255)
                                                                                                                                                                                   aTCTTACCACTTAATCCTGAACGGCTGCCGATGGTTTGAGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttacagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatac                                                                 >  2:201568‑M1/1‑70 (MQ=255)
                                                                                                                                                                                      gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGt                                                              >  2:370470‑M1/63‑251 (MQ=255)
                                                                                                                                                                                          aaCTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaccccgtctggtttgggcatgatactgatgt                                                           >  2:289886‑M1/1‑63 (MQ=255)
                                                                                                                                                                                               aaTCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcac                                                     >  1:234134‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATCAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGctgctg                                                    <  1:177855‑M1/199‑1 (MQ=255)
                                                                                                                                                                                                aTCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgccactatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcacggttctttgctgccgttaacccgtccggtttgggcatgatactgctgtagtcacg                                                    >  2:277327‑M1/1‑57 (MQ=255)
                                                                                                                                                                                                 atcacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACGCCGTCGCTGTTAATAAATACTTCCGCCAGCGAGTGGGTATTTAACAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGGTGCTGGCGTCATAGTGCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCtgctgc                                                   >  2:478023‑M1/52‑251 (MQ=255)
                                                                                                                                                                                                   cacttatttaagtgatattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGTAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGcc                                                  >  1:36917‑M1/50‑250 (MQ=255)
                                                                                                                                                                                                     gAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgata                                                                  >  1:441121‑M1/1‑52 (MQ=255)
                                                                                                                                                                                                     gAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttagaatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgata                                                                  <  2:441121‑M1/232‑181 (MQ=255)
                                                                                                                                                                                                                gagattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATttgtt                                    >  2:423585‑M1/37‑251 (MQ=255)
                                                                                                                                                                                                                gATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcat                                                                      >  2:330991‑M1/1‑41 (MQ=255)
                                                                                                                                                                                                                gATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcat                                                                      <  1:330991‑M1/217‑177 (MQ=255)
                                                                                                                                                                                                                 atattggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATttgttg                                   <  2:6920‑M1/216‑1 (MQ=255)
                                                                                                                                                                                                                     tggttgtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATTTGTTGCat                                >  1:91851‑M1/32‑250 (MQ=255)
                                                                                                                                                                                                                        ttgtctggagcttcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGCGTGGGAATTTATAAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCCTAGTTCACAGAGGTCTGGCAGGCATTGCTGGTCATTGTAAAGCTGCTGCCGACGGGCATTTGTTGCATATAc                            <  2:455779‑M1/223‑1 (MQ=255)
                                                                                                                                                                                                                          gtctggagattcagggggccagtctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGGGCGCCGCTTCTGGCGTCATAGTTCACAGAGGTCTGGCAGGTATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATTTGTTGCATATACTg                          >  1:21300‑M1/27‑251 (MQ=255)
                                                                                                                                                                                                                                           cccTTCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctc          <  1:73861‑M1/250‑237 (MQ=255)
                                                                                                                                                                                                                                               tCGCCCAGAGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccgg       <  2:180357‑M1/249‑240 (MQ=255)
                                                                                                                                                                                                                                                 ctaCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCCGCGAGTGGGTCTTTATCAACCGAAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGCTCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATTTGTTGCATATACTGGTAAAACGCGTCTGACAACATGc   <  1:443512‑M1/248‑1 (MQ=255)
                                                                                                                                                                                                                                                  taCAAAGTCGGTACTCCGTCGCTGATGATAAATACTTCCGCCCGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGAGTGCGCCGCTGCTGGCGTCATCGTTCACAGAGGTCTGGCAGGCATTGTGGGTAATTGAAAAGCTGCTGCCGCCGGGCATTTGTTGCATATACTGGTAAACAGCGTCTGACAACATGcc  <  2:365813‑M1/249‑1 (MQ=255)
                                                                                                                                                                                                                                                     agagtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctat                      <  2:186865‑M1/228‑225 (MQ=255)
                                                                                                                                                                                                                                                     agagtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctat                      >  1:186865‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    
TCATCTCGTTGAAGGTGTAGTAATAGGCGGTATTGCTCACCGGTTTCCATGAACTGCCATTCAGACTGAACTGCATATCGTACGCCCCGACGGCCGAGGCTAACGACGAGTTGGCGATCGCCGGGAATATATGGATTGAGGTGTTGCTGAGTCCGTTTGTTTGCAGGGTATAGTTAACCATCTTACAACTTAATCCTGAACGGCTGCCGATGGTTTGCGTCCGGCAGTCGGCGTTCCCTTCGCCCAGAGTCGGTACTCCGTCGCTGTTGATAAATACTTCCGCCAGCGAGTGGGTATTTATCAACCGTAGATTTGCTGCTTTCGTATGGGTGACGTTGCGAACATACCAGTTGCCGGAGGCCTGATCCTTACAGCGTGCGCCGCTGCTGGCGTCATAGTTCACAGAGGTCTGGCAGGCATTGATGGTCATTGTAAAGCTGCTGCCGACGGGCATTTGTTGCATATACTGGTAAAACGCGTCTGACAACATGCC  >  NC_000913/305857‑306349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.