| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,322,274 | T→C | T78A (ACC→GCC) | secG ← | Sec translocon subunit SecG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,322,274 | 0 | T | C | 100.0% | 53.6 / NA | 18 | T78A (ACC→GCC) | secG | Sec translocon subunit SecG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/5); total (13/5) | |||||||||||
TTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGTTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAAGAGCTTCATACATAATCAACCTG > NC_000913/3322047‑3322515 | ttttCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTAccc > 2:317914/1‑250 (MQ=255) tttCAGCGTCTCTTTTCTGTAAGTTGGTACCGAGGACGTGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCTCCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCa < 2:333367/250‑1 (MQ=255) gTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCAcc > 2:152988/1‑248 (MQ=255) accTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCt > 1:306617/1‑251 (MQ=255) ccttggcccGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGATGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTAGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTc > 2:329473/9‑251 (MQ=255) ttAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATc > 2:127936/1‑249 (MQ=255) ttAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATc > 2:29556/1‑249 (MQ=255) gCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTtgct < 1:280253/251‑1 (MQ=255) aGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAAc > 2:73598/1‑124 (MQ=255) aGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAAc < 1:73598/124‑1 (MQ=255) agcTGCCTGAGTTTGTTCGGTTTTCGCCGGTGCCCTCAGCCTTTAACATCCGACACCTTTCTTGGCTTTGTCGCTATAGACGTTCACCGGCACCAGACTGACGCTGAAGAATAACGTAGACAGAAGCGCCGTCATGCGGGCTATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACcacca > 1:180851/1‑247 (MQ=255) ctggctgAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAgg > 2:329248/1‑251 (MQ=255) tttGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGcc > 1:332461/1‑251 (MQ=255) cAGATTTTCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAaga < 2:316004/250‑1 (MQ=255) tttCCCATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAAGAGCTTc > 1:230203/1‑250 (MQ=255) ccATTCGCTACCTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAAGAGCTTcatac > 1:277788/1‑250 (MQ=255) cTTTATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACCGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAAGAGCTTCATACATAATCAACCTg > 2:15422/1‑251 (MQ=255) ttATTGGCTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAAGAGCTTCATACATAATCAACCTg < 2:354714/249‑1 (MQ=255) | TTTTCAGCGTCTCTTTTCTGGAATTTGGTACCGAGGACGGGACTTGAACCCGTAAGCCCTATTGGGCACTACCACCTCAAGGTAGCGTGTCTACCAATTCCACCACCTCGGCACGGATACTACTTTTTAGTTCGGGATATCGCTGGTCGGCTTAGCCGGAGCAGCTGGCTGAGTTTGTTCGGTTTTCGCCGGTGCACTCAGATTTTCCCATTCGCTACCTTTATTGGTTTTGTTGCTATTGATGTTACCCAGCACCAGACTGATGATGAAGAATAACGTTGCCAGCAGCGCCGTCATGCGGGTCATGAAGTTACCAGAACCACTTGAACCAAACAGCGTAGCGGAAGCGCCTGCTCCGAAGGAGGCTCCCATATCAGCGCCTTTACCTTGCTGCAGCATGATCAGACCAACAAGGCCAATTGCCACAATAAGGAAAACTACTAAAAGAGCTTCATACATAATCAACCTG > NC_000913/3322047‑3322515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |