BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,747,981	T→C	V284A (GTA→GCA)	ydhS →	FAD/NAD(P) binding domain‑containing protein YdhS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,747,981	0	T	C	100.0%	73.5 / NA	23	V284A (GTA→GCA)	ydhS	FAD/NAD(P) binding domain‑containing protein YdhS
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/8); total (15/8)

GGATGCGGCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGTATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAGGAAATTGT  >  NC_000913/1747742‑1748221

ggATGCGGCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACATATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGa                                                                                                                                                                                                                                       <  2:191160/251‑1 (MQ=255)

     cGGCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGAtagt                                                                                                                                                                                                                                   >  1:311526/1‑250 (MQ=255)

      ggCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGAtagt                                                                                                                                                                                                                                   >  2:41540/1‑249 (MQ=255)

            ggCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGAtagt                                                                                                                                                                                                                                   >  1:193360/1‑243 (MQ=255)

            ggCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGAtagt                                                                                                                                                                                                                                   <  2:193360/243‑1 (MQ=255)

                            cATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCGTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATcc                                                                                                                                                                                                           <  1:268789/251‑1 (MQ=255)

                                 ttcgttcATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACt                                                                                                                                                                                                      >  2:22969/1‑251 (MQ=255)

                                    gttcATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTgg                                                                                                                                                                                                    >  1:122132/1‑250 (MQ=255)

                                                 gatAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAg                                                                                                                                                                                       <  1:65413/250‑1 (MQ=255)

                                                                            gATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCtt                                                                                                                                                           >  2:14044/1‑251 (MQ=255)

                                                                                     aGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGc                                                                                                                                                  >  2:229409/1‑251 (MQ=255)

                                                                                                                                    cgctcttacgatCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGaa                                                                                                    >  1:277210/12‑250 (MQ=255)

                                                                                                                                           gATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAAtct                                                                                            <  1:266966/251‑1 (MQ=255)

                                                                                                                                                                          tACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGCCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGaaa                                                               <  1:59732/249‑1 (MQ=255)

                                                                                                                                                                                           cAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCg                                            >  2:301349/1‑251 (MQ=255)

                                                                                                                                                                                                               tCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGc                        >  1:48512/1‑251 (MQ=255)

                                                                                                                                                                                                                 aaaaaGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGTCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCAt                      <  1:14044/251‑1 (MQ=255)

                                                                                                                                                                                                                   aaaGGCGAAGAGGGCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATg                     >  2:38065/1‑250 (MQ=255)

                                                                                                                                                                                                                            gagagCCTTTTGGATCGGGCATTTAGCTTGATAGTAGAGGAAATAAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCAAAAGCCTGGTATGCCGAGCGCAAACAACACGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGAGCCTGCATGAAGCCGTAc            >  2:293346/5‑250 (MQ=255)

                                                                                                                                                                                                                             agGGCCGTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATACAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATGCTGCGCCTGCATGAAGCCGTACAg          <  1:122740/251‑1 (MQ=255)

                                                                                                                                                                                                                               ggCCTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAgg         >  1:96644/1‑250 (MQ=255)

                                                                                                                                                                                                                                  cTTTTGGATCGGGCATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAGGAAAt     >  2:232420/1‑251 (MQ=255)

                                                                                                                                                                                                                                     ttGGATCGGGCATTTAGATTGCTAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGCTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAACTCTCCAGGACGTCGACCGCAATAAACGAGAAAAACATACTGTTCCCTGGCGCTATGTCATTCTGCGCCTGCATGAAGCCGAACAGGAACTTGt  >  2:357161/1‑251 (MQ=255)

GGATGCGGCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGTATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAGGAAATTGT  >  NC_000913/1747742‑1748221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`