| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 96.3% | 140.9 / ‑3.8 | 55 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (18/34); minor base C (1/1); total (19/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
GAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGA > NC_000913/1061701‑1062180 | gagaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACt > 1:99821/1‑251 (MQ=255) agaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCACATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTg > 2:143344/1‑251 (MQ=255) aCAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGGGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCGGAAAAACGAA‑CCGCCGCTCACTgcggcg < 1:354849/250‑1 (MQ=255) cggaacatgggggCAGGTGACGGCGTTTAACGGCCCCGTGGAGAGGGTGGCGCAGTGCGAA‑ATGGTCCCCGCGTCGCGGTTGAAATCATGCCCTCGCGGACAGACCAACAGATGGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTCCTCCCGTGAGCTGAACAATGAACAACTTACGCATATC‑CCCAGGCCGCAGTGGGCTGAAGGGTTTGCGTTTCGGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGaa < 1:374912/239‑1 (MQ=255) cGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTgg > 2:1264/1‑249 (MQ=255) ggctggggccGGCGTTTAACGGCCCCGTGGAGATGGGGGCGCAGTGCGAATATG‑TTCCCGCGTGGCAGGGGAAATCAGGACCACGTGGACACCACAACAGAGTCCTTGTGTTTACCCCGGGCTAG‑CGCCGTTGTTCCCCCTGGGGCTGGACGAGAAACACCGTACGCAAACC‑GCCAGTGCGCAGATGGCTAAATTGTTTTGGTTGCAAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGaaa < 2:133474/242‑1 (MQ=255) gCAGGTGACGGCTTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCAAATATG‑TTCCCGCGGCGCAGGTGAAATCATGACCCCGCTGACAGCACAACAGATTGCCTGTGTTTCCGCCTGGCTGG‑CGCGGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGAGGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGaaaa < 1:235636/251‑1 (MQ=255) aGGTGACGGCGTTTAACGGCCCCGTGGAGATGGGGGCGCAGTGCGAATATG‑TTCCCGCTTCGCAGGTAAAATCATGCCCCCGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCCCCCGTGAGCTGGACGATGAACAGCGGAGGCAAATG‑GCCAGGGCTCAGTGGGCTGAATGGTTTTCGTTGCTAAAAATCGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAcc < 1:166114/251‑1 (MQ=255) aGGTGACGGCGTTTAACGGCCCCGAGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGAACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGTAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTAGATGCTGAAAAACGAA‑CCGCCGCTCACTGAGGCGGGGAACGAGCTGGAAAAcc > 2:254965/1‑251 (MQ=255) gcGGCGTTTAACGGCCCGGGGGAGAGGGTGGAGCGGGGCGAATATT‑TTCCCGGGTCGCAGGTGAAATCTTGACCACGCTGAGAGCACAAGAGTTGGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCGGTGGGCTGGAGGATGAACAGCTGACGAAAATC‑GCCGGGGGGCAGATGGTTGAATGGTTGTTGTTGCGAAAAAACAAG‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAtt < 2:37555/250‑1 (MQ=255) gCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGcc > 1:142649/1‑251 (MQ=255) ggCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGAc > 1:11284/1‑250 (MQ=255) ccccGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACATATTGCCTGTGTTTACGCCGGCCTAG‑CGCAGTTGTTCCCCCGTGAGCTGGACGATGAACAACTGACGCAAACC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTGGCTGAAAAACGAA‑CCGCCGCTCACTGCGTCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGt < 1:208925/251‑1 (MQ=255) agagggtggCGCAGTGCAAATATG‑TTCCCGCGGCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTTTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACg < 1:107138/247‑1 (MQ=255) gaTGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACg > 2:90949/1‑250 (MQ=255) gggggggCGCAGTGCGAATATG‑TTCCCGCGTCGCGGGTGAAATCATGACCACGCTGACAGCACAAAAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGAt < 1:220156/246‑1 (MQ=255) gtggCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGcc > 1:67750/1‑251 (MQ=255) cccGCGGCGCAGGAGAAATCATGCCCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCGGTTGTTCTCCCGTGAGGTGGATGAAAAACAACTGACGCAAAAC‑GCCGGTGCGCAGATGGCTGAATGTTTTTGGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGAc < 1:178739/251‑1 (MQ=255) ccGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAACGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACt > 1:58099/1‑251 (MQ=255) aaaTCATGCCCACGCTGACAGCACAACAGATGGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCCCCCGTGAGCGGGACGATGAACAACTGACGAAAATC‑GCCGGTGCGCAGATGGCTGAAGGGTTTTCGTTGCTAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGttt < 2:142649/251‑1 (MQ=255) atgcccACGCTGACAGCACAGCAGTTTGTGTGGGTTTACGC‑GGGGTAGGCGTAGTTTTTCTCCCGTGGGCTGGACGATGAACAACTGAGGCAAATC‑GCAGGTGCGCAGATGTCTGAATGGTTTTCGTGGCTAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtgat < 1:11913/247‑1 (MQ=255) tGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtgatg > 2:81719/1‑251 (MQ=255) gACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtgatg > 1:326624/1‑250 (MQ=255) gACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTTCGGCCTGTTTCTGATGACCGacaaac > 1:63796/1‑251 (MQ=255) acaaaacaGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTGGTTCTCCCGTGAGCTGGAGAATGAACAACTGACGCAAATC‑GCCAGGGCGCAGAGGGCGGAATGGTTTTCGTTGCTAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgc < 2:67750/247‑1 (MQ=255) tggCCTGTGTTTACGCCTGGCTGG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACACCGGACG‑AAATCCGCCAGTGCGCAGAGGGCGGAATGGTTTTCTTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGcc < 2:58099/248‑1 (MQ=255) gtTTACGCCGGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCAt < 1:18624/250‑1 (MQ=255) ttccGCCTGGCTAG‑CGCAGTTGTTCTCCCGGGAGCTGGACGATAAACAACTGACGAAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCg < 1:95954/247‑1 (MQ=255) ccGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGAAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGcc < 1:81719/250‑1 (MQ=255) gCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCt > 1:156927/1‑250 (MQ=255) gCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATAAACAACTGACGCAAATC‑GCCAGGGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAAc < 1:90949/251‑1 (MQ=255) cTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACAAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGGCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTCCaacc > 2:221696/1‑248 (MQ=255) gg‑cgcGGTTGTTCCCCCGTGGGAGGGACGATGAACACCTAACGCAAATC‑GCCAGGGCGCAGATGGCTGAATGGTTTTCGTTGCTAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAGCAAGCGGCGCTGCCGTATGCATCGGCCTACAAACa < 1:140076/248‑1 (MQ=255) aG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑ACCAGTGCGCAGCTGGCTGCCTGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGCACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATTCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑gg > 1:369368/1‑251 (MQ=255) cgcAGTTGTTCTCCCGTGAGCGGGACGATGAACAACTGACGAAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGAc < 1:353030/251‑1 (MQ=255) ggAGCTGGACGATAAACAACTGACGCAAATC‑GCCAGGGCGAAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAAc < 1:295181/250‑1 (MQ=255) tGGACGATGAAAAACTGCCGCAACTC‑CCCAGTCCGCAGAGGGCTGAATGGTTTCCTTTGCGGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCtt < 1:30607/250‑1 (MQ=255) gATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGt > 1:72682/1‑251 (MQ=255) gAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTCTCCTTGCTGAAAACCGAC‑CCGCCGCTCACTACGGCGGTCAACCAGCTGGAAAAACGTATTGCCACCATGCCCGGACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCCCTGCCGTATGCCTCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTg > 1:41266/1‑250 (MQ=255) gAACAACTGACGAAAATC‑GCCAGGGCGCAGATGGCTGAAGGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTg < 1:208190/250‑1 (MQ=255) aaacaacTGACGCAAATC‑GCCAGTGCGAAGATGGCTGAATGGTTTTCGTTGCGAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGa < 1:254667/250‑1 (MQ=255) aaacaacggacacaaaccgcaggggcgcAGATGGCTGAATGGTTTTCTTGGCGAAAAAACAAT‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGa < 2:40618/227‑1 (MQ=255) aatggacgagaaTC‑GCGAGTGCGCAGTTGGTGGAGGGGTTTTTGTTGC‑GAAAAAAGAAGCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGTCGAGCAAGAGATTAAGCGCTTGTTAGtgtaggca < 2:163122/241‑8 (MQ=255) aacTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGAtt > 2:38771/1‑230 (MQ=255) aacTGACGCAAACC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGAtt < 1:38771/230‑1 (MQ=255) tGACGCAAATC‑GACAGTACGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAAAGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGAAAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGCAAAACAAGCGGCGATGACGTCTGCATCGGCCT‑CCAACACGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAggg > 2:208501/1‑251 (MQ=255) aaaTC‑GCCGGGGCGCAGAGGGCTGAATGGTTTTCGTTGCAAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGaa < 2:2297/251‑1 (MQ=255) cAGTGCGCAGGTGGCGGAATGGTTTTGTTTGCTGAAAAACGAG‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGGTAGTTGAGGCAGGGATTGAAACCAGCg < 1:323862/251‑1 (MQ=255) aGATGGCTGAAGGGTTTTCGTTGCTGAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAATCCAGCGGCAATTTc < 1:277175/251‑1 (MQ=255) gggaggggtgtggggggcaaaaaaACGAA‑CCGCCGCGCACTGCGGCGGTGAACGAGCGGGAAAACCGTATTGCCACGCTGACAGGACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGGTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTGCAACGaa < 2:154631/231‑1 (MQ=255) aTGGTTTTCGTTGCTAAAAAACGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCgg < 1:336212/251‑1 (MQ=255) ttttggtgggtaaaaaCCGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAg < 2:138615/238‑1 (MQ=255) ggttgagaaaaaACGAC‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGatcat < 2:139508/243‑1 (MQ=255) gagAAAAACGAC‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGc < 2:228925/249‑1 (MQ=255) aaaaaACGAA‑CCGCCGCTCACGGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGa < 1:143344/250‑1 (MQ=255) | GAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATG‑TTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAG‑CGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATC‑GCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAA‑CCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACA‑GGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGA > NC_000913/1061701‑1062180 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |