| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,014,023 | 0 | T | G | 38.3% | 59.0 / 12.0 | 49 | G255G (GGT→GGG) | pqiB | intermembrane transport protein PqiB |
| Reads supporting (aligned to +/- strand): ref base T (5/24); new base G (17/1); total (24/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTAC > NC_000913/1013783‑1014270 | ggTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCGCCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAAGGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATGGCGTTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGGGGCGGTGTCAGCTTTG‑ATTTG‑CCGGAAGGTCTGGATTTAg < 1:23884/251‑1 (MQ=255) aTCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCAcc < 2:17229/250‑1 (MQ=255) aGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCCGCTTTG‑ATGTG‑CCGGGAGGGCTGGGTTTATGG‑CGGCCAGCGGCACCGCAAAAc > 1:319951/1‑250 (MQ=255) gAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGGCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGtttt < 1:177308/251‑1 (MQ=255) ccAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTat < 1:295144/251‑1 (MQ=255) cTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTT‑TTGTG‑CCGGGAGGGCTGGGTTTTTGG‑CGGCCAGGGGGACCG‑AAAAAAGCTTTTGTTTTTTattattatt > 2:14509/1‑244 (MQ=255) ttCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGTAGCCTTG‑GTGTG‑CCGGGAGGGCTGGGTTTTGGG‑GGGGCAGCGGAACCG‑AAAACaacatttggtttttattatgatc > 1:305126/1‑228 (MQ=255) gATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGACGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCCGCGTTG‑ATGTG‑CCGGGAGGTCTGGTTTTAGGG‑GAGCCCGGGGCACCG‑GAAAAAGCCTTTGTTTTTTTTGATGATCaga > 2:258533/1‑250 (MQ=255) cacaAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGc < 1:225835/251‑1 (MQ=255) caAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGa < 1:278442/191‑1 (MQ=255) aaaaCGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTc < 1:281800/251‑1 (MQ=255) cAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACATCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCAGCTTTT‑ATGTG‑CCGGGAGGGCTGGGTTTTGGG‑GAGCCCGGGGGACCG‑GAAAAAGCTTTCGTTTTTTTTGATGATTAGAAGAGCATTCC‑GGAtt > 1:187495/1‑251 (MQ=255) cAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATTATCAGAAGAGCATTCA‑GTATTCGTTg < 1:325314/250‑1 (MQ=255) aGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑TTGTG‑CCGGGAGGTCTGGGTTTTGGG‑GAGCCCGGGGGACCG‑AAAACAGCTTTCGTTTTGTTTGATGATCAGAAAAGCATTCA‑GGAATCGTTG‑tt > 2:8169/1‑250 (MQ=255) aTCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑TTGTG‑CCGGGAGGGCTGGATTTAGGG‑CAGCCAGGGGCACCG‑ACAACAGCATTCGTTTTTTTTGATGATCAGAAGAGGATTTC‑GGATTTGTTG‑TACA‑cc > 1:331437/1‑251 (MQ=255) aTCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑Taca < 1:14509/249‑1 (MQ=255) aaCTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGAt < 2:40263/251‑1 (MQ=255) ccTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑AGGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGAt < 2:133861/251‑1 (MQ=255) aTGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCAGCCTTT‑TTGTG‑TCGGGAGGGATGGGTTTAGGG‑CAGCCAGGGGGACCG‑AAAACAGCTTTTGTTTTTTTTGATTGTCAGAAGAGAACTCA‑GGGCTCGTTG‑TACA‑CCCATCCCATTTATTTTCTTATGttt > 2:332125/1‑250 (MQ=255) tGACCGAGTGGTGACCAACAATGTTCGCTTCTGGAAATATAGTGGCATTGCGGTTGATCTGACGGCAGCAGGGAGTCGTGGGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTATGG‑CAGCCAGTGGCACCT‑GAAACAGCTTTCTTTGTGTATGATGATCAGAAGAGCATTCA‑GTATTCGTTG‑TACA‑CGGATCACATTGAGTTTCTTATGTTc < 2:348312/250‑1 (MQ=255) aCCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTT‑ATGTG‑CCGGGAGGTGTGGGTTTTGGG‑CCGGCAGCGGGACCG‑AAAACAACTTTCGTTTTTTATGATTATTAGAAGAGGATTTA‑GGGTTCCTTG‑TAAA‑CCGCACACATTGATTATTTTATGTTCttt > 1:374821/1‑251 (MQ=255) ccGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑a < 2:211758/251‑1 (MQ=255) aaTGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGGCAGCTTTG‑ATGTG‑GCGGGAGGGCTGGATTTATGG‑GGGGCAGGGGGACCG‑AAAAAAGCTTTCGTTTTTTTTGGTGATTCGAAGAGCAATCA‑GGATTTGTTG‑TTCA‑CCGCTCACATTGTTTATTTGATGTTTTTT‑TAAGAATTGGTACGCgg > 2:39397/1‑251 (MQ=255) cGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCa < 2:286710/251‑1 (MQ=255) cTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAAAGCTGCTGAGTGGCGGAGGTAGCTTTGTAT‑TG‑TCGGGAGGGATGGGTTTAAGG‑GAGACGGGGGGACCG‑AAAAAAGGTTTCGTTTTGTTTGAGGATAAGAAGAGGATTTA‑GGATTAGTTGGTA‑A‑CCGATCTCAATGATTTTCTTATGTTCTTT‑AAAGAtatgggaaggggtatgcaaacgg > 1:74130/1‑229 (MQ=255) gAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTTAGCTTTT‑ATGTG‑GCGGAAGGGCTGGGTTTTGGG‑GAGCCAGTGGCACCG‑AAAAAAACTTTCGGTTTTTTTGATGATCAGAAGAGCATTTA‑GGATTCTGTG‑TACA‑CCGATCAAATTGATTTTCTTATGTTTTTT‑TAAGATTCGGTACGCGGGCTGCCACCggg > 1:155690/1‑249 (MQ=255) tGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCCGCTTTT‑ATGTG‑CCGGGGGGGATGGGTTTTGGG‑GAGCCCGCGGGACCC‑AAAACAGCTTTCGTTTTGTATGATGTACAGAAGAGGATTCC‑GGATTTGTTG‑TATA‑CCGACCACATTGGTTATTTGATGTTTTTT‑TAAGATTTGGTTAGCGGTCGTCCACCGGGAGcgcccgg > 2:43353/1‑243 (MQ=255) gCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTATCTGCTTTG‑ATGTG‑CCGGGAGGGCTGGAGTTAGGG‑CAGGCAGTGGGAACC‑AAAACAGCATTTGTGTTTTATGATGGTCAGAAGAGCACTCA‑GGAATCGTTT‑TACA‑CCGATCCCATTTATTTTCTGATGGTCTTT‑TAAGAATTGGTACGCGGTCTGTAACCCGGAGGTCCggcag > 1:247297/1‑246 (MQ=255) cGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCCGCTTTT‑ATGGG‑CCGGAAGGGCTGGATTTTGGG‑GAGCCCGTGGCACCG‑AAAACAGCTTTCGTTTTTTATGATTATCAGAAGAGCATTCA‑GGGTTCGTTT‑TACA‑CCCATCACATTGATTTTCTTGTGGTCTTTTAAAAATT‑GGTAAGCGGGCTGCAAACCGGAGCTCCGG‑GAGAGTTCCgg > 1:195967/1‑251 (MQ=255) cGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGGTTTGCTTTT‑GTGGG‑CCGGGAGGGCTGGGTTTAGGG‑GAGCCAGGGGCGCCG‑AAAACAGCGTTTGTTTTTTATGGTGGTCTGAAGAGCATTCATGGGTTTGTT‑‑TACAACACAT‑ACATTTATTTTCTTTTGTTCTTT‑AAAGGTTTGGTACGCGGCCTGCAACCGGGAGcgtcgggatagtgtccg > 1:195961/1‑235 (MQ=255) gATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGGGTAGCTTTG‑ATGTGTCGGGAAGGCTTGGATTT‑GGG‑CAGCCAGGGGCACCG‑AAAAAAGCTTTTGTTTTGTATTGTAATTAGAAAAGCCTTCA‑GGATTCGGTG‑TGCA‑ACGCTCACAATTATTATCTGATGTTTTTT‑TAAGATTCGGTACGCGGGCTGCAACCGGGGGCTCCCG‑TAGAGGTCCcgggggt > 2:132121/1‑248 (MQ=255) aCGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGGCTCAGCTTTG‑ATGTG‑CCCGGAGGGCTGGGTTTTGGG‑CAGCCACGGGCACCG‑AAAAAAGGTTTTGGTTTGTTTGATGCTCAGAAGAGGATTTA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTTTCTGATGTTCTTT‑TAAGATTTGGTACGCGGGCTGCAACCGGGGGGTCCGG‑TAGAGGTCCGGGGGATTCGccc > 1:241256/1‑250 (MQ=255) cGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTGGCCGGA‑GGGCTTGATTTTTGG‑CAGCCCGTGGCACCG‑CAAAAAGGTTTCGTTTTTTATGATTATCAGAAGAGCCTTCA‑GGATTTGTTG‑TACA‑CCGATCACATTGATTTTCTTATGTTTTTT‑TAAGATTCGGTACGCGGTCTGCCACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTg > 1:268827/1‑251 (MQ=255) ggATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCAcc < 1:324879/97‑1 (MQ=255) aTGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCTACCGGGATCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAg < 1:218699/251‑1 (MQ=255) tgGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTTCGCTTTT‑TTGTG‑GCGGGAGGTCTGGGGTTAGGG‑GAGGCCGGGGGGCCG‑AAAACAGCTTTTGTTTTTTATGATGGTCAGAAAAGCATTTC‑GGCTTCGTTG‑TTCA‑CCGATCACATTTATTTTCTGATGTTTTTT‑TTAAATTCGGTACCCGGGCTGCAACACGGAGCTCCGG‑TAGAGTTTCGGGGTATTCGCCTGGGGACCGTAAACAAAg > 2:168253/1‑249 (MQ=255) agaTGGGCTCATTGACAACGCTGCTGAGTGGCGGTCTTAGCTTTT‑TTGTGTCGGGGGGGCCGGGTTTTAGGG‑‑GGCCCCTGGCACCG‑AAAAAACATTTTGGTTTGTTTGTTGATCAGAAGAGCCTTCA‑GGATTCGTTG‑TATA‑CCGATCACCTTGATTTTTTGCTGTTTTTT‑TAAAATTCGGTACGCGGTCTGCAACCCGGAGCCCCGG‑GAGAGTTTCGGGGGGTTTGCCTGGGGACCGTAAGCaaaaagccc > 2:213362/1‑245 (MQ=255) gaTGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCAt < 1:8169/251‑1 (MQ=255) gggCTCATTGACAACGCTGCTGAGTGGCGGTGTTCGCTTTG‑ATGTG‑CCGGCAGGGTTGGGTTTAGGGGCA‑CCAGTGGCAACG‑AAAAAAGCTTTTGTTTTTTATGATGATCAAAAGAGCCTTCA‑GGATTCGTTG‑TTCA‑ACGGTCACATTTATTATTTTTTGTTTTTT‑TAAAATTCCGGACGCGGTCTGCCACCGGGGGCCCCGGGTA‑AATTCCGGGGTATTTGCCTTGGTACCGTAAGCaaaaggccaatct > 1:40530/1‑241 (MQ=255) gACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGa < 1:258533/251‑1 (MQ=255) cAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAat < 2:55275/251‑1 (MQ=255) ctgctgAGTGGCGGTGTCCGCTTTG‑ATTTG‑CCGGGAGGGCTTGATTTTGGG‑CAGCCAGTGGCACCG‑AAAAAAGCTTTCGGTTTTTATGATGATCAGAAGAGCCTTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑TAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGGATTCGCCTGGGGACCGTAAGCAAAGGGCCATTccgatcgggagagcacac > 1:249753/1‑234 (MQ=255) ctgctgAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTc < 2:249753/234‑1 (MQ=255) gAGTGGCGGTGTCAGCTGTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCGCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGtaag < 2:114449/250‑4 (MQ=255) gtgtCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAAc < 2:168962/251‑1 (MQ=255) gtg‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTa < 1:44820/250‑1 (MQ=255) tg‑CCGGAAGGTCTGGCTTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCa > 2:266408/1‑226 (MQ=255) tg‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCa < 1:266408/226‑1 (MQ=255) aGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTAc < 2:245708/251‑1 (MQ=255) | GGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTG‑ATGTG‑CCGGAAGGTCTGGATTTAGGG‑CAGCCAGTGGCACCG‑AAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCA‑GGATTCGTTG‑TACA‑CCGATCACATTGATTATCTGATGTTCTTT‑AAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGG‑TAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTAC > NC_000913/1013783‑1014270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |