| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 862,559 | 0 | G | T | 39.4% | 31.2 / 13.2 | 33 | H16Q (CAC→CAA) | ybiW | putative pyruvate formate lyase |
| Reads supporting (aligned to +/- strand): ref base G (5/15); new base T (13/0); total (18/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TTTTTCGATCCACGAGACAGTATATTCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCAGCTCGTCGGCGGCAAAATCGGTAAT > NC_000913/862316‑862809 | tttttCGATCCACGAGACAGTATATTCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAA‑A‑TAGCACC‑AGCGCA‑‑TTTTTTTGGGCtt > 1:297407/1‑251 (MQ=255) tttgtgATCCACTAGACAGTATATTCCGTGAAGAGCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTGGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCTCGACGTACCGGGATCGGCTTATCGAGATTTTTTTGATACATCTCGTTATAGTGCTGCGCGCGCTCGGGACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑ACCGCA‑‑TTTTTGTgcgatt < 2:243031/245‑4 (MQ=255) ccACGAGACAGTATATTCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCgg < 1:217488/250‑1 (MQ=255) aCGAGACAGTATATTCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGAGTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑ATTTTGTGCGCTTTAATGCGGTCg < 2:244595/251‑1 (MQ=255) aGTATATTCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCg < 1:209144/251‑1 (MQ=255) ttCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GGACC‑CGCGCA‑‑TTTTTTTGTGCTTTTATGGGGtgtcctagcgtggccc > 1:283425/1‑236 (MQ=255) cGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TACAATA‑T‑TCACCCAG‑GCA‑‑TTTTTTTGAGGTTTATAGCGGGCGCTGAGCGGG‑TCCCGtt > 1:272680/1‑251 (MQ=255) ggAAGAGCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTc < 2:229067/251‑1 (MQ=255) aGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCAAC‑CGCGCC‑‑TTTTTTTTTGCTTTTATGCGGTCGCTGAGCGGG‑TCCCGTTTctgt > 1:28115/1‑248 (MQ=255) cggcgcgAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCCGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TCCAAAA‑T‑TCACC‑CGCGCA‑‑TTTTTTTGCGCTTTTATGCGGTCGCTGGGCGGG‑TCCCGTTTCC‑GTGTGGT‑cttt > 1:51289/1‑248 (MQ=255) ccTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAgg < 1:331935/251‑1 (MQ=255) ggTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTAGCCTCGTAAGGTc < 1:120868/250‑1 (MQ=255) aCTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TACAATA‑T‑GCACC‑CGCGCC‑‑TTTTTTTGCGCTTTAATGCGGGCGCTGAGCGGG‑TCCAGTTTTA‑GTGTGGG‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑GTAACCCTTTCt > 1:5368/1‑251 (MQ=255) cTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAAAA‑T‑GCACC‑AGCGCC‑‑TTTTTTTGCGGTTTTATGGGGGCGCTGAGCGTG‑TCCAGTTTTT‑GGGTGGT‑CATTGGTGTTTTCCTCGTAAGGTCGCGG‑TTAAACCTTTCTg > 1:287847/1‑251 (MQ=255) cGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTggcag < 2:5368/250‑1 (MQ=255) gtgtTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CATAATAAT‑GC‑CC‑CCCGCC‑‑CTTTTTTGCGCTTTTATGTGGGCGCTGGGCGGG‑TCCAGTTTTATGGGGGGT‑C‑TGGTTGTTTTCCTCGTGATGTCGCGG‑TTTAcccctttttgccggg > 2:152975/1‑239 (MQ=255) gATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TACAATAAT‑G‑AAC‑ACCGCA‑‑TTTTTTTGGGCTTTTATGCGGGTGCCGGGCGGG‑GCCAGATTTA‑TGGTGGT‑CATGGTTGTTATTCTCGTAAAGTCGCGG‑GTTACCCATTTTGGCCGGCCTACTTCTTGGGCaagtacg > 1:326060/1‑246 (MQ=255) cAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTTTAACAAAA‑T‑‑TACC‑ACCGCA‑‑TTTTTTTGCGCTTTTATGCGGTCGCCTAGCGGGGTCCACTTT‑A‑GCGTGGG‑GCTGGTTGTTTTCATCGTGAGGTGGCGGGTTAACC‑TTTCTGGCCGGCCTACTGGC‑GGGCAAAAACGAGCatttt > 2:335832/1‑247 (MQ=255) aTGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TCCCATA‑T‑GCACC‑CACGCC‑‑TTTTTTTTCGCTTTTATGCGGGCGCCGGGCGTG‑TCCCGGTTCT‑GTGGGGTGCTTGGTT‑TTATTCTCGTAAGGGCGCGG‑GTATCCCTTTCTGGGAGGCATAATGCTTGGGCaaatcgcgcaagtttggcgg > 1:367620/1‑234 (MQ=255) cGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TACAATA‑T‑GCCCC‑CACGCA‑‑CTTTTGTGCGCTTTAATGCGGGCCCTTAGCGTG‑TCCAGTTTCC‑GTTGGGG‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑GTAAACCTTTCTGGGAGGCATACTGCT‑GGGCAAAGTCTAGCAATTTTGGCGCATCCAGCGGGTTTTTCGGGGCg > 1:235543/1‑251 (MQ=255) aCCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑ACACC‑AGCGCA‑‑TTTTTTTGCGCTTTTATGCGGGCGCTGGGCGCG‑TCCCGGTTTA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGACGAGCCGTTCTGGCGCATCAAGCGGTTTTTCCCGGGCGTc > 1:344850/1‑250 (MQ=255) gttgATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGatat < 2:80815/250‑1 (MQ=255) tACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑TTCAAAA‑C‑GCAAC‑ACAGCAATTTTTTGTGCGCT‑‑AATGGGGGCGCAGCGCGGG‑TCCCGTTTTA‑GTGGGGG‑GATTGTTGTTATTCCCGTAAAGGGGCGG‑TTTACCCCTTCTTGGAGGCGTAATGCT‑GGGGAAAGAAGAGCAGTTTTGGGGCCTCAAGCGGGTTTTTCGGGGCGTCGTAGGGCCGATtaagtgaggggtgttttttg > 1:152631/1‑236 (MQ=255) tgctgcGCGCGCTCGGTACAGACTGGCGGTTT‑CACAAAA‑T‑TCACC‑AGCGCC‑‑TTTTTTTGCGCTTTAATTCGGGCGCTGAGCGGG‑GCCAGTTTCC‑GTGTGGT‑CATTGTTGTTATTCTCGTAAGGGCGCGG‑GTAACCCTTTTTGGCAGGCATTCTGCT‑GGGCGAAATCGAGCCGTTCTGGCGCATCAAACGGGTTTTTCTGGGCGGCCTAAGGCAGATTTAGGAAGGGATATTTTTTGATGCCCCGCGTGTgg > 2:9135/1‑251 (MQ=255) cgtgaCAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGTTCGCTGAGCTTG‑TCCAGTTTCA‑GTTTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGGGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAAt < 1:43555/247‑1 (MQ=255) ggTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAg > 1:183230/1‑187 (MQ=255) ggTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTGTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAg < 2:183230/187‑1 (MQ=255) tt‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGc > 1:95806/1‑251 (MQ=255) aaTA‑T‑GCCCC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCCCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGAGTAAGTAAGTGATATTTGTTTATGCCCAGCGTGTGGTAGTGCAGAAAAGGAATTTCTCCAACGTGCAGCtc < 2:234497/251‑1 (MQ=255) a‑t‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCGGCtcgtc > 2:296472/1‑251 (MQ=255) a‑t‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCAGCtcgtc < 1:332518/251‑1 (MQ=255) c‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCAGCTCGTCggcggc < 2:95806/251‑1 (MQ=255) gcA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCAGCTCGTCGGCGGCaaaa < 1:9135/251‑1 (MQ=255) gtgCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCAGCTCGTCGGCGGCAAAATCGGTAAt > 1:313452/1‑251 (MQ=255) | TTTTTCGATCCACGAGACAGTATATTCCGGGAAGATCGGCGCGGCGCGAACTTCGCTTGCCTGGTTGCCAATGATCAACTCATCGTGTTTGATCCAGATGGTGCGATTCGCCAGGTGATGCGCCAGTGCCAGCGCGCGACGTACCGGGATCGGCTTATCGAGATGTTGTTGATACATCTCGGTATAGTGCTGCGCGCGCTCGGTACAGACTGGCGGTTT‑CACAATA‑T‑GCACC‑AGCGCA‑‑TTTTTGTGCGCTTTAATGCGGTCGCTGAGCGTG‑TCCAGTTTCA‑GTGTGGT‑CATGGTTGTTATCCTCGTAAGGTCGCGG‑TTAACCCTTTCTGGCAGGCATACTGCT‑GGGCAAAGTCGAGCAGTTCTGGCGCATCAAGCGGTTTTTCCGGGGCGTCATAGGGCAGATTAAGTAAGTGATATTTGTTGATGCCCAGCGTGTGGTAGGGCAGAAAATGAATTTCGCCAACGTGCAGCTCGTCGGCGGCAAAATCGGTAAT > NC_000913/862316‑862809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |