Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,938,768 IS2 (+) +5 bp coding (542‑546/993 nt) rbsR → DNA‑binding transcriptional dual regulator RbsR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3187426NA (NA)29 (0.800) 26/486 0.4 100% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 3938768 = 0 (0.000)coding (542/993 nt) rbsR DNA‑binding transcriptional dual regulator RbsR
* ? NC_000913 = 39387720 (0.000)36 (0.990) 33/486 0.2 100% coding (546/993 nt) rbsR DNA‑binding transcriptional dual regulator RbsR
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region

ATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAG  >  NC_000913/3938525‑3939015
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       
gagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTAtt                                                                                                                                                                                                                                                  <  2:323258‑M2/8‑1 (MQ=255)
    aCAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACAAGTTGATGGATAGCTCCTACTGTGCCCCGAACAGCATCAACCTTCGCGTGACCTCATGCAACGTTATACGACAGTGCCTCCTGAGCTGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGCTCGATAAAGGTCATCACCGTATCGCCTGTtagactg                                                                                                                                                                                                                                              >  1:246152‑M1/1‑244 (MQ=255)
       gagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGcc                                                                                                                                                                                                                                           >  2:118197‑M2/237‑251 (MQ=255)
              acggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTgg                                                                                                                                                                                                                                     >  1:138065‑M2/230‑250 (MQ=255)
                     agcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAAc                                                                                                                                                                                                                              <  1:272689‑M2/28‑1 (MQ=255)
                       cTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagac                                                                                                                                                                                                                           >  2:122624‑M1/1‑225 (MQ=255)
                             aCGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaacca                                                                                                                                                                                                                      >  1:93280‑M1/1‑219 (MQ=255)
                               gCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaata                                                                                                                                                                                                                   <  1:212071‑M1/251‑35 (MQ=255)
                                 tGATGCAAAAGCGCGTTGATGGTTTGTTGTAACTGTGCCCCGAAACGCATCAACCTTCGCGTGACATCATGCAACGTTATCCGACAGTGCCTAATGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTTGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACTCGTATCGCCTGAtagactggccacctgaatctccagaaaaccactatc                                                                                                                                                                                                                 >  2:61837‑M1/1‑215 (MQ=255)
                                 cgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCt                                                                                                                                                                                                                  <  1:192323‑M2/40‑1 (MQ=255)
                                  gATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCTTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGAGAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaagcaatatc                                                                                                                                                                                                                 <  2:58152‑M1/250‑37 (MQ=255)
                                   aTGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCTATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAGTGCAATATCTGATCGATAAAGTTCATACCCGGATCGCCTGGtagactggccccctgaatctccagacaaccaatatcac                                                                                                                                                                                                               <  1:48924‑M1/251‑39 (MQ=255)
                                     aaaacgataaagcgtgactccatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcaggggcgttcgagcattataacgaatggcatccgcattgtgcgctgggttatcgctcgccacgggaatatctgcggcagcggtcttgtaaggggttaagtgataacagaggtctggaaatataggggcaaatccaCCGGTATTGCCGGCTCGCTGGATAAAACTCCGGCGCGCCTGCGGt                                                                                                                                                                                                             <  1:349343‑M2/45‑1 (MQ=255)
                                             aaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGt                                                                                                                                                                                                     >  2:329734‑M2/199‑251 (MQ=255)
                                                 tGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTCCTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat                                                                                                                                                                                                  >  2:32242‑M1/1‑199 (MQ=255)
                                                  gtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCg                                                                                                                                                                                                <  1:329734‑M2/58‑1 (MQ=255)
                                                   aTGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                                                                                                                                                                               <  1:341521‑M1/251‑55 (MQ=255)
                                                   aTGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATCCAACGTTATCCGACAGTGCCTACTGTGATGATGGTCTGGGGTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagattggccccctggatttccagacaaccaatatcgcttaaataattgatagt                                                                                                                                                                                               <  2:51054‑M1/251‑55 (MQ=255)
                                                     ggCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                                                                                                                                                                             <  2:53497‑M1/251‑57 (MQ=255)
                                                     actacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgatcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGggc                                                                                                                                                                                             >  1:360952‑M2/191‑251 (MQ=255)
                                                         catcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGgcggcg                                                                                                                                                                                         <  1:124985‑M2/65‑1 (MQ=255)
                                                                   gtgCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                                                                                                                                                                                <  1:78886‑M1/250‑70 (MQ=255)
                                                                        caaactcgacgggataatggcagcaaaggaccttgccaaggcgttcgagcattataacgaacggcatctgcatagtgtgctgggttatcgctcgccacgggactatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatatagcggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGACGGTTATCGGGCGGCGATGAAACGTGcgggc                                                                                                                                                                          >  2:170493‑M2/172‑250 (MQ=255)
                                                                          gAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact                                                                                                                                                                          >  1:229528‑M1/1‑174 (MQ=255)
                                                                                     accgtcgcgTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatctcttaaataagtgatagtcttaatactagtttttagactagtcattggagaa                                                                                                                                                             <  1:107405‑M1/247‑89 (MQ=255)
                                                                                        acggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaataactgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATg                                                                                                                                                          <  2:234183‑M2/96‑1 (MQ=255)
                                                                                         tCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag                                                                                                                                                          <  1:334560‑M1/250‑92 (MQ=255)
                                                                                          ggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGc                                                                                                                                                        >  2:57726‑M2/154‑251 (MQ=255)
                                                                                          ggcagcaaagaaccttgaagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggactatctgcggcagcgggcttgtaatgggttaagtgatcacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGc                                                                                                                                                        >  1:26414‑M2/154‑251 (MQ=255)
                                                                                             agcaaagaaccgtgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTAt                                                                                                                                                     <  2:98321‑M2/101‑1 (MQ=255)
                                                                                                     accttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCAc                                                                                                                                             >  1:50237‑M2/143‑251 (MQ=255)
                                                                                                         tgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCGATGAAGTCACTgg                                                                                                                                          <  1:263147‑M2/112‑1 (MQ=255)
                                                                                                             gaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggctggtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTAGTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTGATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGTTGAtt                                                                                                                                     <  2:56627‑M2/117‑1 (MQ=255)
                                                                                                                   gACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATATTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCAGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagggatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaa                                                                                                                                >  1:302314‑M1/1‑133 (MQ=255)
                                                                                                                     cgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAAttt                                                                                                                             <  2:194098‑M2/125‑1 (MQ=255)
                                                                                                                      gagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAAttt                                                                                                                             >  1:19956‑M2/126‑250 (MQ=255)
                                                                                                                             aCTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcagtggagaacagatgattgatgtcttagggccggagaaacgcagacggc                                                                                                                     <  2:113798‑M1/251‑129 (MQ=255)
                                                                                                                                   aatggcagccgcatcgtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAacggcgggagtgg                                                                                                               >  2:234707‑M2/113‑246 (MQ=255)
                                                                                                                                      ggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcgacagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcctCCTGTATTACCGGCCCGCTGGATTAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCGGATGGCTATGAAGTCATGGGTGATTTTGAATCTAACTCCGGTTTTGACg                                                                                                             <  2:373688‑M2/141‑1 (MQ=255)
                                                                                                                                             gggCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatggcttagtgccggagaaacgcagacggcgtaccacacaggaaa                                                                                                      <  1:160799‑M1/250‑144 (MQ=255)
                                                                                                                                                   ggcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTg                                                                                               <  1:254033‑M2/155‑1 (MQ=255)
                                                                                                                                                       cGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaat                                                                                            <  2:93280‑M1/250‑154 (MQ=255)
                                                                                                                                                                cAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcag                                                                                  <  1:308300‑M1/251‑164 (MQ=255)
                                                                                                                                                                cAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                                                                                                                           >  2:313442‑M1/1‑88 (MQ=255)
                                                                                                                                                                cAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                                                                                                                                                                           <  1:313442‑M1/146‑59 (MQ=255)
                                                                                                                                                                   cGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacaccggaaaagatcgcaattgttcagcagagc                                                                               >  2:169847‑M1/1‑85 (MQ=255)
                                                                                                                                                                         tATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagct                                                                              <  1:122624‑M1/246‑168 (MQ=255)
                                                                                                                                                                             cAGGATAACTCGTTGCTGGGCTGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgactctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgtagaacagatgattgatgtcttagggccggagaaacgcagacgtcgtaccacacaggaaaatatctcaattgttcagcagagctttgaaccg                                                                      <  2:222494‑M1/250‑176 (MQ=255)
                                                                                                                                                                                               ggCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaat                                                                                            >  1:11934‑M1/1‑57 (MQ=255)
                                                                                                                                                                                               ggCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaat                                                                                            <  2:11934‑M1/210‑154 (MQ=255)
                                                                                                                                                                                                gtgtaatgggttaagtgataacagaggtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACACCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCGCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATTCGGCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGa                                                   <  1:170493‑M2/199‑1 (MQ=255)
                                                                                                                                                                                                gCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaacc                                                                       <  1:205497‑M1/230‑175 (MQ=255)
                                                                                                                                                                                                gCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaacc                                                                       >  2:205497‑M1/1‑56 (MQ=255)
                                                                                                                                                                                                  gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGc                                                <  1:252182‑M2/202‑1 (MQ=255)
                                                                                                                                                                                                  gtaatgggttaagtgataacagatgtcgggaaatatagggtcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATgactc                                                <  1:252171‑M2/202‑3 (MQ=255)
                                                                                                                                                                                                          aGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcc                                              >  2:354188‑M1/1‑46 (MQ=255)
                                                                                                                                                                                                          aGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcc                                              <  1:354188‑M1/245‑200 (MQ=255)
                                                                                                                                                                                                                     atCTGATCGATAAAGGTCATACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagc                             >  2:361455‑M1/1‑35 (MQ=255)
                                                                                                                                                                                                                                  atataggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATc                <  2:293682‑M2/234‑1 (MQ=255)
                                                                                                                                                                                                                                      aggggcaaatccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGc            <  2:50237‑M2/238‑1 (MQ=255)
                                                                                                                                                                                                                                       aTACCCGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatttct           <  2:297394‑M1/251‑235 (MQ=255)
                                                                                                                                                                                                                                         acccgaagcgcctgttagcctggccccctgaatctccagacaacctatatcactgagataagtgattggcttaatactagtttttagactagtaattggagaacagttgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagcgttgaaccggggctgacggtctccatcgttgcccggcaatatggcgtagtagccagccagttatttctct         >  2:69420‑M1/9‑15 (MQ=255)
                                                                                                                                                                                                                                            cGTATCGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatttctctggc      <  2:184881‑M1/251‑240 (MQ=255)
                                                                                                                                                                                                                                                ccaCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACa   <  1:19170‑M2/247‑1 (MQ=255)
                                                                                                                                                                                                                                                 cGCCTGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatttctctggcgtaa  <  1:361455‑M1/250‑244 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                       
ATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAG  >  NC_000913/3938525‑3939015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.