New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275508	0 (0.000)	24 (0.960)	23/472	0.2	100%	coding (184/1404 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_000913	372749 =	0 (0.000)					coding (635/810 nt)	mhpD	2‑hydroxypentadienoate hydratase

TGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTT  >  NC_000913/275259‑275740                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         tGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGGctggctggg                                                                                                                                                                                                                                         >  2:131595/1‑250 (MQ=255)          aCGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaat                                                                                                                                                                                                                                <  1:205082‑M1/251‑11 (MQ=255)                 ataACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccag                                                                                                                                                                                                                          <  1:71160‑M1/250‑17 (MQ=255)                                 ggATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctg                                                                                                                                                                                                          <  1:63081‑M1/250‑33 (MQ=255)                                     gTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcac                                                                                                                                                                                                     <  1:64720‑M1/251‑38 (MQ=255)                                                cATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaaaggccagtctgggggaaccgctgcgcaccggggatatcc                                                                                                                                                                                          >  1:111450‑M1/1‑203 (MQ=255)                                                        tAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttac                                                                                                                                                                                   <  2:165170‑M1/250‑56 (MQ=255)                                                                                    aaaTGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTTGTGCGCTGGTGGGCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgccccggggaaatcattcttatcgggggattaggtccgatgggggcggtgg                                                                                                                                                      >  1:226714‑M1/1‑167 (MQ=255)                                                                                      aTGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcgccggagatatcattcttaccggggcattaggtccgatggtggcggtgaat                                                                                                                                                    <  1:42237‑M1/251‑87 (MQ=255)                                                                                           ccACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTGCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgccaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcggg                                                                                                                                               <  1:14‑M1/251‑92 (MQ=255)                                                                                            cACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggc                                                                                                                                              <  1:57245‑M1/251‑93 (MQ=255)                                                                                                                        ccTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggca                                                                                                                  <  1:141781‑M1/251‑121 (MQ=255)                                                                                                                               aTGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggtt                                                                                                            <  2:51802‑M1/250‑127 (MQ=255)                                                                                                                                 gCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcag                                                                                                         <  2:143214‑M1/251‑130 (MQ=255)                                                                                                                                                                  attCTTCAATACCGGGTACATCATTTCCACCACTTGAGCGGCGGGTACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTCGCTGGcacgcaaactggccagtctgggtgaaccgctgcgcaccggatatatcattcttaccggtgcattaggtccgatggtggcggtgaatgctggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaa                                                                         <  1:35112‑M1/250‑162 (MQ=255)                                                                                                                                                                            aCCGGGTACATCATTTCCCCCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtc                                                              <  2:68872‑M1/251‑173 (MQ=255)                                                                                                                                                                               gggTACATCATTTCCACCACGGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatg                                                           <  2:240494‑M1/251‑176 (MQ=255)                                                                                                                                                                                    catcatTTCCTCCACTGGAGCGGCGGGCACGCTGCTGGCCTAGCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatgcccagtctgggtgaaccgctgcgcaccggagatatcattcttgccgtggcattaggtccgatggtggcggtgaattcgtgctatcgttttgaagcccatattgaagtcataggttcagttgctgcgccattttcaagcgcagccccaaaatgaagcctgtcatgagtaa                                                      <  2:182320‑M1/251‑181 (MQ=255)                                                                                                                                                                                       catTTCCCCCACTGGAGCGGCGGGAACGCTGCTGGACTATCTGATTGGGGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcg                                                   <  2:199743‑M1/251‑184 (MQ=255)                                                                                                                                                                                                         ggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcgg                                 >  1:266467‑M1/1‑50 (MQ=255)                                                                                                                                                                                                                    tgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggggaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaac                       >  2:101981‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                         gCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggt                 >  2:67276‑M1/1‑34 (MQ=255)                                                                                                                                                                                                                         gCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggggaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcgggtctggcaacattggt                 >  2:56448‑M1/1‑34 (MQ=255)                                                                                                                                                                                                                                       tGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgcccttatcggttctggcaacattggtaccgatctgatgat   >  2:85621‑M1/1‑20 (MQ=255)                                                                                                                                                                                                                                        gcgcTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtaccgatctgatgatt  <  1:131595‑M1/251‑233 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         TGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTT  >  NC_000913/275259‑275740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.