New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275508	0 (0.000)	14 (0.670)	13/470	0.6	100%	coding (184/1404 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_000913	372749 =	0 (0.000)					coding (635/810 nt)	mhpD	2‑hydroxypentadienoate hydratase

AAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTC  >  NC_000913/275280‑275745                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                              aaaCCTTCTTTGGATGTTTAGATGTCCATACGTTTAGACGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGGCTATCTTGTTGGTGCGCTGGTGGGCTGGCTGGcccgcaaaacgggcagtctggg                                                                                                                                                                                                                         >  2:142838‑M1/1‑229 (MQ=255)                gTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcac                                                                                                                                                                                                          <  1:107945‑M1/251‑38 (MQ=255)                                       agattataTGCAAAAAACACAACAAAATGCGCCACTGAAGCGCACAAAGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCTGCGTGATTGGCACAGGATTATTCTTCAATACCGGTTACATCATTTCCACCACTGGGGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccgcagatatcattcttaccgggg                                                                                                                                                                                   <  2:227615‑M1/248‑61 (MQ=255)                                                         acaacaAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtgg                                                                                                                                                                 <  2:60043‑M1/251‑79 (MQ=255)                                                              aaaaTGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGGCTGGCTGGcacgcaaaatggccaggctgggggaaccgctgcgccccggagatatcattcttaccggggcattaggtccgatggtggggggg                                                                                                                                                            >  1:89441‑M1/1‑168 (MQ=255)                                                                    cgcCACTGAAGCGCACAATGAAAACGCGGTACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCCTCAATACCGGGTACATCATTTCCCCCACTGGAGCGGCGGGAACGCTGCTGGCCTTTCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaattgccagtctgggggaaccgctgcgcaccggagatatcattctttccgggggattaggtccgatggtggcggtgaatgcg                                                                                                                                                      <  1:50067‑M1/251‑90 (MQ=255)                                                                                      tGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaaaggccagtctgggggaaccgctgcgcaccggagatatcatttttaccggggcattaggtccgatggtgggggtggatgcggggggtcgttttgaaacc                                                                                                                                    >  1:204407‑M1/1‑144 (MQ=255)                                                                                         aaaCGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccat                                                                                                                                 <  2:89441‑M1/251‑111 (MQ=255)                                                                                                                       gcggcgTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgaca                                                                                                   <  1:45303‑M1/251‑141 (MQ=255)                                                                                                                                             attCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggggaatgcgggcgatcgttttgaagcccatattgaagggataggttgagttgctgcgacattttcaagcgcagccccaaaa                                                                              <  1:28085‑M1/250‑162 (MQ=255)                                                                                                                                                                                               tgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcgggtctggcaac                            >  2:225220‑M1/1‑39 (MQ=255)                                                                                                                                                                                               tgctgGCCTATCTGATTGGCGCGCAGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaacaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaac                            >  2:82059‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                  tGCGCTGGAGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggacgtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtaccgatctgatgat        >  2:220335‑M1/1‑20 (MQ=255)                                                                                                                                                                                                                        ggtggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgttttgaagcccatattgaaggcataggttcagttgctgcgacattttcaagcgcagccccaaaaggaagtctgtcatgagtaagcgtaaagtcgccattatcggttctggcaacattggtaccgatctgatgattaaaat  <  1:84153‑M1/251‑238 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                              AAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTC  >  NC_000913/275280‑275745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.