| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,630,295 | C→T | Q76Q (CAG→CAA) | ettA ← | energy‑dependent translational throttle protein EttA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,630,295 | 0 | C | T | 93.8% | 91.6 / NA | 32 | Q76Q (CAG→CAA) | ettA | energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (13/17); minor base G (0/2); total (13/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTCCGGCAGACGTAGCGCATCCGCCGCACGCTCCAGCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTG > NC_000913/4630057‑4630526 | aGTCCGGCAGGCGTTGCGCATCCGCCGCACGCTCCAGCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATaa < 2:69302/251‑1 (MQ=255) ggCAGACGTAGCGCATCCGCCGCACGCTCCAGCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCACAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAAt > 1:55913/1‑251 (MQ=255) ccAGCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGTTTCGTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCtt < 1:13804/249‑1 (MQ=255) aGCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCAcc > 2:120242/1‑251 (MQ=255) gCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCt < 2:100725/251‑1 (MQ=255) gTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCtt < 1:87942/249‑1 (MQ=255) ccGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGAt < 2:137878/250‑1 (MQ=255) gATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCttt > 1:217744/1‑250 (MQ=255) tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATc < 2:261023/250‑1 (MQ=255) tATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATc < 1:177522/250‑1 (MQ=255) gtcgtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCg < 1:180436/251‑1 (MQ=255) gtGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCa < 1:139889/251‑1 (MQ=255) gggCCTTTTACAGCGGCCAGCTTTTAAAAATGGGCCTCCGGATCGGCGCACAGCGCATACCCTTCCCCCAGGCTTTGCAGGGCGTA‑ACCCCCTT‑CTGAACCC‑GTTTCTTCAA‑GGGACCCACGCACGGGGTGTTCCGGGTTCAGCTGCGGTTCTTGGGGCAGATACCCAATTTTGATTTCGGGCTGCGGACGCGCTTCACCGGCGATGTCTTTTTCAAGGCCCGCCATAATGCGCAGCAGGGTGGACTTAcc < 1:49976/250‑1 (MQ=255) tGTTCAGCGGCCAGTTTGACAAACTCGGCCTCCGGAGCGGCGTACAGCACATACTCTTCATCCAGGCTGTGGGGGGCGTT‑A‑CCACTTTCTGAACCC‑GCTTCTTAAA‑TGGACTCGCGCGGGGTGCGTTCGGGTTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTTGGGCTGCGGGCGCTCTCCCCCTTCGATGTTTTTACAAACGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCgcgc < 2:161978/250‑1 (MQ=255) gaaaaaagcggaccctggttgggggTACAGCCCATACACTACACCCAGGGGTTTGAGGGTGTA‑AACCCCTT‑CTAAACCC‑GCTTCTTCAA‑TGGACTCACGCACGTTGTGTCCGGGGTTCAGCTGGGTTTCTTGCGGCAGATAACCAATTTTGTTGTCGGGCTGCGGACGCTCTTCCCCTTGGTTGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGaca < 2:94757/226‑1 (MQ=255) aaTCGGCATCGGGAGGGGCGTACGGCGCATCCGCTTCATCCAGGTGTT‑GAGGGGGTTTACCCATTT‑CTGAACCC‑GTTTTTTAAA‑TGGACCCACGCAGTGTTTGTTCCGGGTTGGGCTGCGGTTCTTGCGGCAGATAACCATTCTTTATGTCTGGCGGGGGCCGCGCTTCCCCTGCGATGTCTTTATCAATCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAAtt < 2:109979/251‑1 (MQ=255) gATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAggg > 1:80812/1‑251 (MQ=255) cGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGga > 2:180411/1‑249 (MQ=255) aCAGCGCATACACTACATCCAGGCGTGTCAGGGCGTT‑AAACACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGAGTTCCGGGTTCAGCTGCGGTTCTTGAGGCAGATAACCAATCTTGAAGTCTGGCTGCGGGCGCGATTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGAATTACCCGCGGCATTCACACCCAGGCCACCAATTTTTGCCCCGTGGAATAAACTc > 2:283214/1‑251 (MQ=255) cgcccatccccTTCATCCGGGCGTTTCAGTGCTTT‑ACCCACTT‑ATGAACCC‑TCTTCT‑CAACGGGCCACACCCACGGTGTGTTCCGGTTTCAGCGGCGGTTTTTGCGCCAGATAACCATTCTTTTTGTCGGGTTGCTGACGCTCTTCACCTTCGATTTTTTTATCACCGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCATGACACCAATTTTTGCCCCAGGGAAGAAACTCag < 1:25306/241‑1 (MQ=255) ccgcaaccactcattccgggCGTTTAAGGGCGTT‑AACCCCTG‑C‑GAAACCTGTTTCTTTAA‑TGGTCGCCCGCAGGGTTTGTGCCGGGTTTAGCTCCGGTTCTTGCGCCAGATAACCAACTTTGATGTCTGGCGGGGGCCGCGCTCCGCCTGCTATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGTTGGACTTACCCGCGCCATTCAGACCCAGGACGCCAATTTTTGCCCCAGGGAAGAAACTCaga < 1:126588/233‑1 (MQ=255) gcATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCag > 2:53340/1‑248 (MQ=255) aTACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCagag > 1:217053/1‑248 (MQ=255) gggggTTTCAGGGCGTT‑AACCTCT‑‑GAGAAACCCTCTTTTTCAA‑GGGACTCCCCCATGTTGTCTTCGGGGTGAAGCTGGGTTTCGTGCGGAAGATAACAAATCTTGATGTTTGGCTGCGGCCGCGTTCCACCTTCGATTTTTTTATAAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCaaa < 2:227450/245‑1 (MQ=255) ggCGTT‑AACCACTT‑CTGAACCC‑GCTTCTTCAA‑GGGCCCCCCGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCATTCTTGATGTCTGGCTGCGGCCGCGCTTCCCCTTCGATGTCTTTATAAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTcg < 1:107039/251‑1 (MQ=255) gCGTA‑AACCCCTT‑C‑GAAACCCGCTTTTTCAA‑TGGCCCCCCGCCGGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGAAAACCAATTTTGTTTTTGGGCGGGGGACGCGCTTCCCCTTCGATGTTTTTACCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTcgg < 1:161224/251‑1 (MQ=255) ccACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGaac > 1:126338/1‑250 (MQ=255) cTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACt > 1:86847/1‑251 (MQ=255) gtgcgcccacgagcggggtgtTCCGGGTTCAGCTGCGTTTCTTGCGACCTATAACCACTCTTGATGTCGGGGTGCGGGCGCGCTTCACCTCCTGTTTTTTTAACAAGCCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATg < 2:185382/232‑1 (MQ=255) cacgGAGTGTTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGGATAAACGAAtt > 1:260188/1‑251 (MQ=255) gtTCCGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACg > 2:51989/1‑251 (MQ=255) ccGGGTTCAGCTGCGGTTCTTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTg > 1:149194/1‑251 (MQ=255) | AGTCCGGCAGACGTAGCGCATCCGCCGCACGCTCCAGCTGTACGTTCAGATTATGACCGTCGTGAGCCTGAATGATCTCTTCCAGACGGCCTTGTTCAGCGGCCAGCTTGTCAAAATCGGCATCCGGATCGGCGTACAGCGCATACACTTCATCCAGGCGTTTCAGGGCGTT‑AACCACTT‑CTGAAACC‑GCTTCTTCAA‑TGGACTCACGCACGGTGTGTTCCGGGTTCAGCTGCGGTTCCTGCGGCAGATAACCAATCTTGATGTCTGGCTGCGGACGCGCTTCACCTTCGATGTCTTTATCAATGCCCGCCATAATGCGCAGCAGGGTGGACTTACCCGCGCCATTCAGACCCAGGACACCAATTTTTGCCCCAGGGAAGAAACTCAGAGAGATGTTTTTCAAAATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTG > NC_000913/4630057‑4630526 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |