| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,193,820 | C→T | G129R (GGA→AGA) | thiE ← | thiamine phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,193,820 | 0 | C | T | 98.1% | 164.6 / ‑5.2 | 52 | G129R (GGA→AGA) | thiE | thiamine phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (31/20); minor base G (0/1); total (31/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.71e-01 | |||||||||||
ATCGCCAACTCCTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTC > NC_000913/4193575‑4194060 | atCGCCAACTCCTGCAATTTCCAGCAACTGTGCCTTGGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGCCGGCGATACTGCCGACACCCGTTGCTATCCCCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGGGGGATAATCCGCCAGGCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAgcg < 2:96702/251‑1 (MQ=255)atCGCCAACTCCTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGACGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACCTGTCTCAgcg > 1:184678/1‑251 (MQ=255) cAACTCCTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATCCTGACGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGat > 1:305161/1‑250 (MQ=255) cTCCTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGAtata > 2:39603/1‑250 (MQ=255) ccTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGAtata > 2:76824/1‑248 (MQ=255) ccTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGCGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGCAGGCATCTGTTTGGTTTGCGTCGGGCACACATGTCTCCGCGCGagctaaa > 2:186962/1‑244 (MQ=255) ccTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAAAGGCGCTGAAGACGGCGATCCTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCCGACTGATGACGCCAATCGCCACGGTGGGGTAATCCGCCAGTCGCTAAGCATGGCGTGCCAGCTGTTACAGCCCCTGAGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGAtata > 1:26007/1‑248 (MQ=255) ccAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGCCTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCCGCCCCCGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACCCATGTCTCAGCGCGATATAAGAGAGGCGtgct > 2:86795/1‑251 (MQ=255) aCTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTGGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAgc < 1:39603/251‑1 (MQ=255) gtgCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGCCGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGcgcg > 1:108678/1‑251 (MQ=255) tgCCGTTGCCAAACGCCAGTCCGCGGCTTAAGTAATGGAGCTGACGACGACGATAATGCCGACACCCGTTGCTATCACCGCAGGCGCACGTGCCAGACTGATTCCGCCAATCGCCACGGTGGGATAATCCGCCAGCCCCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGCGCAGAAGGCATCTGTTCGGTTTGCGTCGGGAACACATGTCTCAGCCCGATAAAAACGGGGCGcgctgacaacccg > 2:280752/1‑242 (MQ=255) gTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTc < 1:189432/251‑1 (MQ=255) ttGCCAACCGCCAGTCTGCGGCTTGAGTAATGGCGCTGCCGACGGCGATACTTCCAACACCCGTTCCTATCCCCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGTGAACACATGTCGCATCGCGATATAAGAGGGGCGTTCTGCCAGCGCGACGTc < 2:306926/250‑1 (MQ=255) tGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCg < 1:202062/250‑1 (MQ=255) cAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGAttt > 1:69343/1‑251 (MQ=255) aCGCCAGTCTGCGGCTTGCGTAATGGCGCTGACGACGAAGATACTGCCGCCACACGTTGCTATCACCGCAGGCGCGCGTACCACACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGCGCCAGCTGTTCCAGCCCCTGCGGCGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGCGCTGCCAGCGCGACGTCGATTTccc > 1:201318/1‑250 (MQ=255) gTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGt > 1:41364/1‑251 (MQ=255) gTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAAc < 1:293306/251‑1 (MQ=255) gcTGACGCCGGCGCTACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATCTAAGAGTGGCGTGCTGCCAACGCGACGTCGATTTCCATATCGTCATG‑GTGCGAAACGCCCAGcc > 2:273903/1‑251 (MQ=255) tGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGc > 1:243159/1‑251 (MQ=255) gacgacGGCGATACTGCCGACCCCCGTTGCTATCACCCCAGACGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGcctcc > 2:132385/1‑248 (MQ=255) aCTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCcgcgc > 1:218008/1‑251 (MQ=255) cGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATg < 2:277719/251‑1 (MQ=255) gACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATgg < 1:263616/251‑1 (MQ=255) ggCTATCACCGCAGGCGCGCGTGACAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGATTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTgaga < 2:211321/249‑1 (MQ=255) gCTATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTg > 2:281326/1‑246 (MQ=255) tATCACCGCAGGCGCGCGTGCCAGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGCTGGCCTTg > 2:61407/1‑244 (MQ=255) aGACTGATGCCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGCTTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGCTGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGccc > 2:74942/1‑251 (MQ=255) gACTGATGCCGCCAACCGCCCCGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGcccc < 1:163950/251‑1 (MQ=255) gccGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGa < 2:302848/250‑1 (MQ=255) gCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGc < 2:127433/251‑1 (MQ=255) cAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGCGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGcc > 1:259286/1‑250 (MQ=255) ccACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATAGGcc > 1:302337/1‑251 (MQ=255) aaTCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGAt < 1:69057/250‑1 (MQ=255) cGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAgccgcc > 1:64362/1‑250 (MQ=255) tCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGt > 1:11160/1‑250 (MQ=255) aaCATGCCGTGCCAGCTGTTCCAGCCACTGCGGAGCAGACGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGCGGGGCGTGCTGCAAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGAAAt > 2:127475/1‑251 (MQ=255) aCATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATc < 1:185693/251‑1 (MQ=255) cGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAAGCATCTCTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGAAGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCAATACGACTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGAt > 1:142302/1‑251 (MQ=255) tCCAGCCCCGGCGGTGCAGAAGGCATTTGTTTGGTTTGCGTCGGGAACACAGTTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATcgcg < 2:243159/250‑1 (MQ=255) ccTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAg < 1:137083/251‑1 (MQ=255) gTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGCGGGGCGTGCTGCCAGCGCGACGTCGCTTTCCATATCGTCATGTGT‑CGAAACGCCCCGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCCAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGcggcgg > 2:200698/1‑251 (MQ=255) gTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGcggcgg > 1:96203/1‑251 (MQ=255) cAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGccc > 1:130799/1‑251 (MQ=255) gaggtattCTGTTTGGTTTGCGTCGTGACCGAATGTCTCGTCCCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATGTCGGCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGGGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCAGACGCCTGAGGCTTGATCGCCAGCCGCCAGTAAACGTTGATAAACAATCCCGCGTTATAGCGGCGGCCCAg < 2:291031/244‑1 (MQ=255) gtttggtttgCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAAt < 1:76824/247‑1 (MQ=255) gtttggttggCGTCGGGAACACATGTCTCAGCGCGATATAAGGGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAAtt < 2:251053/248‑1 (MQ=255) tgCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGAc > 1:281889/1‑251 (MQ=255) tCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATCGCGGCGCCCCAGCGCAATTGCCGCCACGCCATCg > 2:195743/1‑251 (MQ=255) aaCACATGTCTCAGCGCGCTATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGc > 2:27259/1‑107 (MQ=255) aaCACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGc < 1:27259/107‑1 (MQ=255) aaCACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTc < 1:58982/251‑1 (MQ=255) | ATCGCCAACTCCTGCAATTTCCAGCAACTGTGCCGTTGCCAAACGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTGCTATCACCGCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGT‑CGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTC > NC_000913/4193575‑4194060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |