| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,914,648 | C→T | A185T (GCG→ACG) | glmU ← | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,914,648 | 0 | C | T | 96.8% | 92.5 / NA | 31 | A185T (GCG→ACG) | glmU | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (13/17); minor base G (0/1); total (13/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
AGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGCCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGT > NC_000913/3914416‑3914893 | aGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGGCAGCCAGCGTTTCATATc < 2:188349/251‑1 (MQ=255) aTCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACCTCGCTTAAACGTTGCGGATGAACGGCGACGATTTTACGCCCTTCCTGCTACGCCCGCGCCATAATGTTGGTGATGGAGTATTCGCCCTGAGCATTATTTTTGGTCAGCTTCGTCAGCCCGCGGTTTATATCtt > 1:199430/1‑250 (MQ=255) ggATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCa < 1:247578/249‑1 (MQ=255) aTAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGGGATGTAGTATTCGCCCTGGGCATTATTTTTGGTCAGCTTCGTTCGCCAGCGTTTCATATCTTCGCCGTTGGCAATCAGAATGCCggg > 1:53325/1‑250 (MQ=255) ttttCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGAc < 1:221376/250‑1 (MQ=255) gccggTTCGGACTGATAAACACGCTCCAGACGGGAGAGGTGCAGGCGGTTATTCACGCCTGCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTCGGTCAGCTGCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCtc < 2:232864/247‑1 (MQ=255) gCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCtc < 2:232856/251‑1 (MQ=255) gATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATc < 1:203095/250‑1 (MQ=255) aTAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCtt < 2:53325/251‑1 (MQ=255) gCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTGGTGCTca < 2:32388/251‑1 (MQ=255) ccAGACGGGAGAGTTGCAGGCGGATATTCACGCCTTCTACTTCGCTTAAACGTTGCGGGTGAAAGGCGACGCTTTCACGCCCTTCCTGATACGCCACCGCAATAATGTCGGTGGTGTAAGATTTGCCCTGAGCATTTTTGTTGGTCAGCTTCGTCAGCCCGCGTTTCATATCTGCGCCGTTGGCAATCAGAAAACCGGGGGTGATCTCCTGAATATTACGCTGCCCGTCGGTGGAATCTTTGTGCTcaacc > 1:288475/1‑250 (MQ=255) tCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTACTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACgg > 2:84046/1‑251 (MQ=255) tACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTc > 2:89624/1‑251 (MQ=255) aCTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGt < 1:210554/249‑1 (MQ=255) aCTTCGCTTAAACGTGGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTAGTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGt < 2:43383/249‑1 (MQ=255) cTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTcc > 2:231643/1‑250 (MQ=255) attAAACGTTGCGGAGGAACGGCGACGATTTCACGCCCTTCCTGATACGCTAGCGCAATAAAGTCGGTGATGAAGTATTAGCCCTGAGCATTATTGTTGGTCAACTTCGTCAGCCAGCGTTTCATATCTACGCCGTTTGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAGTGCCGGTAACTTAGCAATTTGCACGGGTGATACGtacttcacc > 2:218705/2‑243 (MQ=255) aaaCGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGAGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCACTCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGt > 1:49895/1‑251 (MQ=255) ggATGAACGGCGACGTTTTCACGCCCTTCCTGATACGCCAGCTCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGTTCATCTTCGTCAGCCAGCGTTTCATATCTTCTCCGTTGGCAATCAGAATGCCGGGGTTGATCTCCTGAATCTGACGCTGCTCTTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTGTCACGGGTGAGACGTTCATAACCGGGCGGatcatc < 2:255809/251‑1 (MQ=255) cgacgaTTTCACGCCCTTCCTGATCCGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCCTTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCAcc > 1:103469/1‑251 (MQ=255) tgcACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTcagc < 1:207581/248‑1 (MQ=255) aCGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTAATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTTCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGAc < 2:211577/251‑1 (MQ=255) ttCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGc > 1:199142/1‑251 (MQ=255) cccTGATACGCCAGCGCAATAATGTCTGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGcc < 2:116982/250‑1 (MQ=255) aGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGttt < 1:191806/251‑1 (MQ=255) aGCGCAATAATGACGGTGATGCAGTATTCGCCATGAGCATTATTGTTGGCCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTCACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGttt > 2:22975/1‑251 (MQ=255) cGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGTTTAGCATCACGCAg < 1:31967/250‑1 (MQ=255) agtaTGCGCCCTGAGCATTATTGTTGGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAg < 1:213017/250‑1 (MQ=255) gttgGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGGCCAGAACCGGGCGGATCATCCAGTTGCACCGTCAGCAGACCTATGCCGCCCTTCGGTTTAGCATCACTCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCa < 1:307261/251‑1 (MQ=255) ttgGTCAGCTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCAc > 2:81573/1‑251 (MQ=255) cTTCGTCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGt > 1:105662/1‑251 (MQ=255) | AGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTCGCTTAAACGTTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATACGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGTCAGCTTCGCCAGCCAGCGTTTCATATCTGCGCCGTTGGCAATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCATCCAGTTTCACCGTCAGCAGACCAATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGT > NC_000913/3914416‑3914893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |