Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,850,507 C→T A74T (GCG→ACG)  uhpA ← DNA‑binding transcriptional activator UhpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,850,5070CT100.0% 106.6 / NA 35A74T (GCG→ACG) uhpADNA‑binding transcriptional activator UhpA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (13/22);  total (13/22)

CCGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAA  >  NC_000913/3850264‑3850748
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                 
ccGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCt                                                                                                                                                                                                                                            <  1:12763/251‑1 (MQ=255)
ccGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCt                                                                                                                                                                                                                                            <  1:45791/251‑1 (MQ=255)
        ccTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGc                                                                                                                                                                                                                                      >  2:300994/1‑249 (MQ=255)
                       tCCGCCACCGGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCt                                                                                                                                                                                                                      <  1:175113/250‑1 (MQ=255)
                                  gCGTTCACGGTTGGTTAGCTGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCAGCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCAGACCTTTCTGCAGCTGGCTTAGCAGCTCCAGACCGgaga                                                                                                                                                                                                          <  2:293920/251‑1 (MQ=255)
                                              ggTTAGCGGGTCCTGACGACCGGATGCCAGCTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATgg                                                                                                                                                                                              >  2:127856/1‑251 (MQ=255)
                                                      ggTCCGGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATTGAGATATCg                                                                                                                                                                                      <  2:51191/251‑1 (MQ=255)
                                                            gacgacCGGATGCCAGTTTAATTGCAATATCCGGCGTTAGATAACAGCCGCCCTTGGTAACCGTATGCACCGCAGCAATGAGTTCATGCGGGCTACAGCGGTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTGGGCAGCTGGCTTAGCAGGTCCAGACCGGAGATATCGGGCATGGAGATATCGCaaa                                                                                                                                                                                  <  2:252585/249‑1 (MQ=255)
                                                            gacgacCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAAt                                                                                                                                                                                 <  2:265111/250‑1 (MQ=255)
                                                                 ccGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACCGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATACTCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATacacac                                                                                                                                                                           >  2:182168/1‑251 (MQ=255)
                                                                           gTTTAATGGCAATCTCCGGCTTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAAGGAGTTCATCCGGGCTACCGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAAACAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGAAATAGGGCATGGAGATATCGCAAATACACCCCGGCACAccc                                                                                                                                                                 >  2:282788/1‑250 (MQ=255)
                                                                                          ccGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGccc                                                                                                                                                   <  2:303053/250‑1 (MQ=255)
                                                                                                       aCAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGACGCGTGCCCCCGCGTTCAGCGCCTGCTCAAACAGCGCAGGAATGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACAGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCTCCGCCAGCGCCTcgc                                                                                                                                     >  1:132410/1‑251 (MQ=255)
                                                                                                          gccgccCGTGGCAACCGTCTGCCCCGCAGCAATGAGTTCATCCGGGCTACAGCGTGTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCGGCCAAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCGGGCTTAGCAGCTCCAGACCGGAGATAGCGGGCATGGAGATATCGCAAACACACCCCTGCACCCCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGcc                                                                                                                                  <  2:56470/251‑1 (MQ=255)
                                                                                                                     cAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTa                                                                                                                                                                                                                            <  2:44606/150‑1 (MQ=255)
                                                                                                                     cAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTa                                                                                                                                                                                                                            >  1:44606/1‑150 (MQ=255)
                                                                                                                            aggCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCaa                                                                                                                <  1:87057/249‑1 (MQ=255)
                                                                                                                               cACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACt                                                                                                              >  2:56539/1‑250 (MQ=255)
                                                                                                                                aCCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTAc                                                                                                            >  2:130154/1‑251 (MQ=255)
                                                                                                                                        aaTGAGTTCATCCGGGCTTCAGCGTTGTGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCCGCGCAGGACTGTCGTGACCGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACCCCTCCACACCGCGCCCTGGCAGCTCCGCCAGCGCCTGGCGCCCCGAACCAAACTCGGCATCTACCTGCAAAt                                                                                                    <  1:175215/251‑1 (MQ=255)
                                                                                                                                                cATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTcc                                                                                            <  1:220704/251‑1 (MQ=255)
                                                                                                                                                 aTCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGTAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAAATATCGGGCATGGATATATCGCAAATGCACACCTGCACGCCGCGCCCCGGCATCCCCGCCAGCGCCGCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCa                                                                                           <  1:299379/251‑1 (MQ=255)
                                                                                                                                                    cGGGCTCCGGCGTTTGGAAAGAAAGCCGCGTGCCCCCTCGTTAAGCGCCTGCTCACCCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTGCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGcc                                                                                        <  2:204787/251‑1 (MQ=255)
                                                                                                                                                                                  tGCCCCCGCGGTAAGCGCCTGCTCAACCACCGCAGGACTGTCGTGAACGGAGAGAATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATAGGGCATGGAGATATCGCAAATACACACCTGCACTCCGCGCCCCGGCACCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGAc                                                            <  1:282788/249‑1 (MQ=255)
                                                                                                                                                                                      cccGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTcc                                                                                            >  1:25748/1‑213 (MQ=255)
                                                                                                                                                                                              aaGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGt                                              >  1:301866/1‑251 (MQ=255)
                                                                                                                                                                                                      gCTCAACCAGCGCAGGCCTGTCGTGAACGGAGATCATACGCGTCGTCATCCCTTCCGGCAGCGGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATACCGCAAATCCACCCCGGCCCACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAg                                       <  2:301866/250‑1 (MQ=255)
                                                                                                                                                                                                      gCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAg                                       <  1:136733/250‑1 (MQ=255)
                                                                                                                                                                                                                         gTCGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCCTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGCCGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCt                   >  1:25808/1‑251 (MQ=255)
                                                                                                                                                                                                                          gcGTGAACGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCtt                  <  1:98701/250‑1 (MQ=255)
                                                                                                                                                                                                                             ggacaggAGAGCATAAGCTTCGTCATGCCTTTCGCCAGCGGGCTTAGCAGCTCCAGACCGGAGATATCGGGCAGGGAGATATCGCAAATACCCACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTGCCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTc               <  2:87763/246‑1 (MQ=255)
                                                                                                                                                                                                                                aCGGAGAGCATAATCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGACTATAAGGGCAACGGTGATCATGGTCTTGTCCTg            >  1:28232/1‑251 (MQ=255)
                                                                                                                                                                                                                                       gCATAATCGTCGTCATCCCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTa     <  1:56539/251‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaTCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACCCACCTGCACCCCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTaaaa  <  1:130154/250‑1 (MQ=255)
                                                                                                                                                                                                                                           aaTCGTCGTCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGCTGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTgaaa  >  2:117103/1‑250 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                 
CCGCCATTCCTTGCGCCAGTTTTTCCGCCACCTGGCGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAA  >  NC_000913/3850264‑3850748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: