| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,536,038 | C→A | D183Y (GAT→TAT) | ompR ← | DNA‑binding transcriptional dual regulator OmpR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,536,038 | 0 | C | A | 95.9% | 153.3 / NA | 49 | D183Y (GAT→TAT) | ompR | DNA‑binding transcriptional dual regulator OmpR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (23/24); minor base G (0/2); total (23/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC > NC_000913/3535801‑3536284 | aGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGc > 1:248241/1‑251 (MQ=255) tGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGCTGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCAcgcg > 2:242409/1‑251 (MQ=255) gACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCAcgcg < 1:149253/250‑1 (MQ=255) tAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGAcc > 2:24170/1‑249 (MQ=255) aaCGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGt > 1:293745/1‑251 (MQ=255) aaaTGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGAAGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGAGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTAc > 1:295267/1‑251 (MQ=255) ttCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGCTCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGATCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACTCGGATGGCTGACCAGTGCCTTAAGTACCGCAAAcc > 2:81243/1‑250 (MQ=255) gTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCACAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTctc < 2:34264/251‑3 (MQ=255) aaGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTgg > 2:162778/1‑249 (MQ=255) aGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTg > 2:164269/1‑250 (MQ=255) aGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGa < 2:128579/251‑1 (MQ=255) gcgcAAACGCCTCATGCTTTAGAGCCGTCCGGGACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAg < 2:179786/251‑1 (MQ=255) cgcAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGc < 2:75502/251‑1 (MQ=255) gcAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCg < 2:203907/251‑1 (MQ=255) aTCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGcc > 2:62757/1‑250 (MQ=255) gCCTCATGATTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGGCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCGTCAGTACCGCAAACTCTCCGCTGGTGAGCGGCATCg < 2:263111/251‑1 (MQ=255) cATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCt < 2:283506/250‑1 (MQ=255) gCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTcttc > 2:239722/1‑248 (MQ=255) agagCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTccc > 1:179409/1‑249 (MQ=255) gagCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCgcccttccg > 2:63922/1‑243 (MQ=255) gCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCgg > 1:187859/1‑250 (MQ=255) gTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCgcccttgcggaca > 2:87200/1‑238 (MQ=255) cGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACAttt < 2:164153/251‑1 (MQ=255) ggTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTCCACCAGCTTATAGCGGGAGAGGGGCACACGCGGATGGCGGACCAGGGCCAGCAGGACCGAAAACACACCGCGGGGGAGGGGGACCGGCTCggcagaccgggagcaatc > 2:235647/1‑234 (MQ=255) gTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTcg < 2:293745/251‑1 (MQ=255) aCAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTCCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTcgc < 1:698/250‑1 (MQ=255) aaGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCCCGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCCTCGGCTCGTCTTCCCGGAACATTTcgcccgc > 2:183378/1‑247 (MQ=255) aaGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGt > 1:65281/1‑251 (MQ=255) cccagaccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGtt < 2:248241/251‑1 (MQ=255) cccagaccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGtt < 1:303846/251‑1 (MQ=255) cccagaccccagacGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGtt > 1:297190/1‑251 (MQ=255) ggTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTAc < 2:184747/251‑1 (MQ=255) gAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGaaa < 1:152782/251‑1 (MQ=255) gAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGa < 1:301893/249‑1 (MQ=255) gggATCTTCTCCCCCCATGCGGCGCAGACGCGAAATCTGCACGGCGATGGAGCGTTCCATTGCGGAATATTCACGCCCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCCCCGCTGGTGAGCGGCATCGGCTCGTCTGCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGA‑AATTACCGCCTCTTCCt < 2:65281/250‑1 (MQ=255) ttcttcCACCATGCGGCGCAGACGCAAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGAAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCCCGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCCCCGCGGGTGAGCGGCATCGGCTCGTCTTCGCGAAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGAc < 2:104019/250‑1 (MQ=255) caTGCGGCGCAGACGCGAAATCGGCACGTCGATGGAGCGTCCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGAAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTg < 1:222972/251‑1 (MQ=255) gcAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGGACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCCCTTCCTGTGACGGTGCGCCTGGCAgttcg > 1:107283/1‑251 (MQ=255) aaaTCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGGGCGGCTCCCGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTga < 1:24170/251‑1 (MQ=255) cggagagggAGCTTTCCATGGCGGAATTTTCGCGCCCACGGGCAAGTTTCATCAGCTTATAGCGGGAGAGCGGCGCCCGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCCCCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGTAACATTTCGCGCGTCCCGAGGTTAAGTTTGAACTTACC‑AAAGCCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACgcagc < 2:33897/244‑1 (MQ=255) gTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGGCTTCGCGGCACATTTCCCCCGCACCGAGGGTTAGGTTGAACTTCCCGAAAAC‑AAATAACCCCCCTTCCTTTGACGGTGGCCCTCGCAGTTCGGTCGccctcccgcgccga > 2:258819/1‑238 (MQ=255) ggagagttcctgtGCGAAATATTCACGACCGCGGGCAAGGTCCATCAGCTTATGGCGGGAGAGCGTCTCACGGGGATGGCTTACCCGTGCCTTCAGTACCGCAAACGCCCCGCGGTTGATCGGCATCTGCTCGTCTTCGCGAAACATTTCGCGCGTACCGGGGTTAAGTTTGAACTGACGGAAAGC‑AATTGCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCAc < 1:171807/239‑1 (MQ=255) ggagagttcatttGCGGAATATTCACGCACACGGGCAAGGTTCATCAGCTGATAGGGGGAGAGCGGCTCACGAGGATGGCTGACCACCGCCTTCAGTACCGAAAACTCCCCGCTGGTGAGCGGCATCGGCTCTTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTATGAACTTCCCGAAAGA‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCTCCGCAc < 1:78062/240‑1 (MQ=255) tCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATAGCGGGAGGGCGGCTCACGCGGTTGGCTGACCAGTGCCTTCAGTCCCGCAACCTCACCGCGGGGGAGCGGCATCGGCTCTTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATAc < 1:297024/250‑1 (MQ=255) ccACGGGCAAGGTTCATCAGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCTCGCGTACCGAGGGTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCCGCACCGCACGGATACGGGCCAGCAGTTCACGCggggt > 1:141292/1‑249 (MQ=255) tcagcaGCTTATAGGGGGAGAGCGGCCCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTTCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTgg < 1:238869/246‑1 (MQ=255) catcaGCTTATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGa > 1:96416/1‑250 (MQ=255) gCTTATGGCGGGAGAGCGGCTCACGCGGAGGGCTGACCAGTGCCTTCAGTCCCGCAACCTCCCCGCTGGTGGGCGGCATCGGCTCGTCGTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTCCCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAg < 2:131242/251‑1 (MQ=255) ttATAGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCCAGGGTTAGTTTGGACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCCGGTCACGCGGGGTAAACGGTTTTGGaaattaggc > 1:240428/1‑244 (MQ=255) | AGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGCCGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATGGAGCGTTCCATTGCGGAATATTCACGACCACGGGCAAGGTTCATCAGCTTATCGCGGGAGAGCGGCTCACGCGGATGGCTGACCAGTGCCTTCAGTACCGCAAACTCACCGCTGGTGAGCGGCATCGGCTCGTCTTCGCGGAACATTTCGCGCGTACCGAGGTTAAGTTTGAACTTACCGAAAGC‑AATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC > NC_000913/3535801‑3536284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |