| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,434,629 | IS1 (–) +8 bp | coding (1930‑1937/1944 nt) | cpdB ← | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 25 (0.860) | 25/484 | 0.3 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4434636 | 0 (0.000) | coding (1930/1944 nt) | cpdB | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase | |||||
| * | ? | NC_000913 | 3583428 = | NA (NA) | 29 (1.000) | 27/484 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4434629 = | 0 (0.000) | coding (1937/1944 nt) | cpdB | 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase | |||||
CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978747‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATTCAACTCAATCCAGTCCGCCAGTGCAGCAACCTTTTCGCTCACCTGCTCGCCCAGCGGC < NC_000913/4434636‑4434391 CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGAAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTG < 2:201012/251‑1 GACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTA < 1:222742/250‑1 ACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTC < 2:274682/251‑1 GGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGG < 1:145652/251‑1 CCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATC < 1:109307/250‑1 TGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATT > 2:211240/1‑251 AGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGCATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTAGCGG > 1:289706/1‑251 AATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGCCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATAAACCGCATCCGGCATTTATTGGCGGCTGCGATGCT < 1:308077/251‑1 AAGCGATATACGCAGCGAATTGAGCGGCATAACCGGCATCTGAGGCCGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCAT < 2:231013/251‑1 GCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCT > 1:56983/1‑251 TATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGAAGCGATGCTGGCGCcatttatc > 2:97292/1‑243 ATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCC < 2:7063/251‑1 GAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCA < 2:74025/250‑1 GGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTC < 2:296413/251‑1 GGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGC > 1:170779/1‑251 GACGGAAGTCGCGGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGAATTATCTGAACATAAA‑CACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCG < 1:203168/251‑1 GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCA < 2:257314/251‑1 GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTC < 1:178576/251‑1 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATT < 1:210537/251‑1 GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATTCA < 2:74762/250‑1 AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATTCAACTCA < 1:165059/251‑1 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCCACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGACGCACGGTCATCCCGCACCGCCCAAACCTCGGGCAAATTCAACTCAATCC > 2:188535/1‑250 ACATAAAACACTATCAATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATTCAACTCAATCCAGTCCGCCAGTGCAGCA < 1:102748/251‑1 ATAAGTTGGAGTCATTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTCGCGCATCTTATTCGCCCCACCAACCCTTCACCGTAGACCAGATACGCCCCGCGCATCCGCCAGTTATGCCGCACGTTCATCCCCCCCCGCCCACAACTCGGGCAAATTCAACTCAATCCAGTCCGCCCGTGCCGCAACCTTTTCGCTCACCc > 2:27754/1‑250 TTACCGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATTCAACTCAATCCAGTCCGCCAGTGCAGCAAACTTTTCGCTCACCTGCTCGCCCAGCGGg > 1:8836/1‑250 CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978747‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGCACCGTAGACCAGATAAGCTCAGCGCATCCGGCAGTTATGCCGCACGTTCATCCCGCACCGCCAACACCTCGGGCAAATTCAACTCAATCCAGTCCGCCAGTGCAGCAACCTTTTCGCTCACCTGCTCGCCCAGCGGC < NC_000913/4434636‑4434391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |