| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,280,406 | 0 | C | A | 28.9% | 55.6 / 12.9 | 38 | Q64K (CAA→AAA) | agaV | N‑acetyl‑D‑galactosamine specific PTS enzyme IIB component |
| Reads supporting (aligned to +/- strand): ref base C (23/4); new base A (1/10); total (24/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.03e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
ATCCTGGCGCAGTACCACACAGCCTGTGAAGGCCAATAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGAC > NC_000913/3280156‑3280656 | aTCCTGGCGCAGTACCACACAGCCTGTGAAGGCCAATAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGc < 1:307870/251‑1 (MQ=255) ccTGTGAAGGCCAATAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑a < 1:150131/251‑1 (MQ=255) aTAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGAt > 2:62484/1‑251 (MQ=255) tAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTACGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATc > 2:278124/1‑251 (MQ=255) aaGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCg > 1:24266/1‑251 (MQ=255) aaaCAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGGCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTACAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGAGCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGa < 2:26275/251‑1 (MQ=255) aaaGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAAt > 1:119635/1‑251 (MQ=255) agGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCctg > 2:30279/1‑251 (MQ=255) agGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCctg > 2:309147/1‑251 (MQ=255) ggAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCctgc > 1:177771/1‑251 (MQ=255) tttAAGCCGGATTGATGCACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGc > 1:315652/1‑176 (MQ=255) gttAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGc < 2:315652/175‑1 (MQ=255) ggATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACg > 1:179662/1‑251 (MQ=255) ggATTGATGAACGCTGGATTCAGGGTC‑GGTGCGGCGTTCAGGGGGTGG‑GTTTTGGGGGGGAAAATC‑GGGTG‑GTGGTAGCCAACGAGGGGGTGGCCGAAGACCGGGTACAAAAAACCCTGATGGAAATGGTACTGGCAGAGGGGATCGCCGTACTTTGCTGGACGCGGAAAAAGGTTATCGACAACATTC‑ACCGCGCCGCCGATCGAAAGAAAACCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACg < 1:197183/251‑1 (MQ=255) gaccGCTTGATTCAGGGTCAGGT‑CGGCGTACAAGGGGTGG‑GATTTACGGGGGAAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAAAAAACCCTGATGAAAAGGGTACGGGCAGAGGGGATCGCCGTCCGTTTCTGGACGCGGAAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAAAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGaa < 1:278124/248‑1 (MQ=255) gatcatcGGTGAGGT‑CGGCGTTCAA‑GGGTGGTGATTTGGGGGGGAAAATC‑TGGTG‑CTGGTAGCCAGCGAGGGGGTTGCGAAAGACCGGGTAAAAAAAACCCTGAGGGAAATGGTAATGGAAAAGGGGATCGCCGTCTGTTTCGGGACGCAGAAAAAATTTATCACCAACATCC‑ACCGCCCCGCCGATCGACAGAAACTCCTTCTGTTTTGTAAACCCCCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCg < 1:333992/245‑1 (MQ=255) ggTCAGGT‑CGGCGTTCAATGGGTCG‑GCTTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGt > 2:340873/1‑251 (MQ=255) ggTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGG‑CAAATCCTGG‑G‑CTTGTAACCAACCATGAGGTTGCCCAAGATCCCGGACCACCAAACCTGGTGGAAATGGTAATGGCCGAAGGGATCGCCGTACGTTTCTGGAAGCTTCAAAAAGTTATCGACAACCTTCCACCGC‑CCCCCGGTCCAAAGAAAATTCTGCCGGGTTGTAAAACAACCCCCGGTTTCCTGACGCTGGTGAAAGGGGGCGGTCCgggg > 1:335502/1‑249 (MQ=255) gT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCg > 2:134647/1‑251 (MQ=255) gggcgttaaaggggtggattttGGGGGGGCAAATC‑TGGGG‑CTGGTAGCAAACGAGGGGTTTGCCGAAGATCCGGTACAACAAACCCTGATGAAAATGGTACTGGCAGAGGGGACCGCCGTACTTTTCTGGACGCTGAAAAAAGTTATCGACAACTTTC‑ACCGCCCCGCCGATCGACAAAAAATCCTGCTGGTTTGAAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCa < 1:306522/232‑1 (MQ=255) gTTCAATGGGTCG‑GCTTTGCGGGGGCAAATC‑TGGCG‑CTGGTAGCCAACGATGCGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAAAACCCGCCGATTTCCTGACGCTGGTGaaa > 2:353957/1‑225 (MQ=255) cAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAACCCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGt > 2:186746/1‑251 (MQ=255) tGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGGGAAAGGTGGCGTTCCGGGGAATCGCATTAACGtggg > 1:316001/1‑248 (MQ=255) gtgg‑gATTTGGGGGGGAAAATC‑‑GGTGGCTGGTAGCCAACGATGAGGTGGCCAAAGTCCCGGTAAAAAAAAACCTGATGAAAAGGGTACGGGCAGAAGGGATCGCCGTCCGTTTGTGGCCGCTGAAAAAAGTTATCGAAAACATTC‑ATCGCGCCGCCGATCAACAAAAAACCCTGCTGTTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCaa < 1:201516/248‑1 (MQ=255) ggtgggattggggggggAAAATG‑TGGGG‑CGGGTAGCCAAGGAGGAGGTGGCCGAAGACCCGGAAAAAAAAAACCTGAGGAAAAGGGAACGGGAAGAAGGAATCGCGGGAGGTTTCGGGACGCGGAAAAAAGTTACCGACAACATTA‑ACCGCGCCGCCGATCGAAAGAAAATCCTGCTGGTTTGAAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCa < 1:186746/239‑1 (MQ=255) tGCGGGGGCAATTC‑TGGTG‑CTGGGACCCACGGATGGGTTTCCCGAAGCTCCGGTACAACAAACCCTGATGGAAATGGTACTGGAAGAAGGGATCGCCGTACGTTTCTGGCCGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCCCCGATCAACAGAAATCCCGGCTGGTTTGTAAACCCCCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCAc < 1:98349/250‑1 (MQ=255) aTC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGACGATCCGGTAAAACAAAACCTGCTGGAAACGGTAATGGCAGAAGGGATCGCCGTACGTTTCTGGCCGCTGCAAAAAGTTATCGACAACCTTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGAGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGc > 1:225410/1‑251 (MQ=255) ggtg‑gtggtAGCCAAGGATGAGGTGGCCGAAGACCCGGAAAAAAAAACCCTGATGGAAAGGGTACGGGCAGAAGGGACCGCCGTACGTTTCTGGCCGCTGAAAAAAGTTATCGAAAACATTC‑ATCGCGCCGCCGAGCGACAGAAAATCCTGCTGGTTTGTAAACCACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAaac < 1:300761/251‑1 (MQ=255) gTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAaac > 1:139109/1‑250 (MQ=255) cAACGAGGGGGTTGCAGAAGCTCGGGTACAAAAAACCCTGAGGGAAATGGTACGGGCAAAAGGGTTCGCCTTCCGTTTCTGGACGCTGCAAAAATTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAAAAAACCCTGTTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAACGGCAAACAACAAATCGCCa < 1:368033/251‑1 (MQ=255) aggAGGTTGCCAAAGACCCGGTAAAAAAAACCCGGAGGGAAAGGGTACGGGCAGAAGGGATCGCCGTACTTTTCTGGACGCTGAAAAAAGTTATCGACAACATTC‑ACCGCGCCGCCGATCGACAAAAAACCCTGCTGTTTTGAAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACg < 1:62484/249‑1 (MQ=255) aTCCGGTACAACAAAACATGATGGAAATGGAACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCg > 2:337599/1‑251 (MQ=255) tCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCgg > 1:93306/1‑251 (MQ=255) aaaCCTGACGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCgc > 1:35236/1‑249 (MQ=255) cgggaaGAAGGGAGCGCCGTACGTTTCTGGACGCTCAAAAAATTTATCGAAAACATTC‑ATCGCGCCGCCGATCGACAAAAAACCCTGCTGGTTTGAAAAACCCCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAAc < 1:309147/246‑1 (MQ=255) gAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTgg > 2:13389/1‑251 (MQ=255) ggATCGCTGTAAGTTTCTAGACGCTGAAAAAAGTTGTCGACAACATTC‑ATCGCGCCGCAGATCGACCGACAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGCATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACACCAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTg > 2:331308/1‑251 (MQ=255) cgcgggtcttttCTGGACGCTGAAAAAAGTTATCGACAACATTC‑ACCGCGCCGCCAACCGACAAAAAATCCTGCTGTTTTGTAAACCCCCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAAt < 1:30279/242‑1 (MQ=255) cGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGCGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCt > 1:315040/1‑251 (MQ=255) gTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCGtt > 1:353593/1‑251 (MQ=255) ggACGCTGCAAAAAGTTACCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCTTTCAgtgc > 2:33945/1‑248 (MQ=255) cAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGAc > 2:184703/1‑251 (MQ=255) | ATCCTGGCGCAGTACCACACAGCCTGTGAAGGCCAATAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGT‑CGGCGTTCAATGGGTCG‑GATTTGCGGGGGCAAATC‑TGGTG‑CTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTC‑ATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGAC > NC_000913/3280156‑3280656 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |