Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,520,507 G→A P66L (CCC→CTC)  hofQ ← DNA utilization protein HofQ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,520,5070GA100.0% 40.2 / NA 14P66L (CCC→CTC) hofQDNA utilization protein HofQ
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (7/7);  total (7/7)

CGGTCATACTCCCTTTGGCACTCAGTAGCTTCTCCCCCGCTTTCGCCAGTTCTCCCGCGTCGGCGTATTGCAGGGTTATACTGCGATTTTCCAGCGGCAGATTTGCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTATCTCCTTGCCGTTGCCACAACCATTGTGGCGGTT  >  NC_000913/3520262‑3520742
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           
cGGTCATACTCCCTTTGGCACTCAGTAGCTTCTCCCCCGCTTTCGCCAGTTCTCCCGCGTCGGCGTATTGCAGGGTTATACTGCGATTTTCCAGCGGCAGATTTGCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACa                                                                                                                                                                                                                                        <  2:31916/251‑1 (MQ=255)
 ggTCATACTCCCTTTGGCACTCAGTAGCTTCTCCCCCGCTTTCGCCAGTTCTCCCGCGTCGGCGTATTGCAGGGTTATACTGCGATTTTCCAGCGGCAGATTTGCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCTATATTGTTATTCTGCCAGGCAATGGAATGCACTTAGAGAAGGTTGCCTTCCTGCCGCGTTATCAGTCCTGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACAt                                                                                                                                                                                                                                       <  1:142599/251‑1 (MQ=255)
                                                 ttCTCCCGCGTCGGCGTATTGCAGGGTTATACTGCGATTTTCCAGCGGCAGATTTGCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCGTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGAcc                                                                                                                                                                                        >  2:31688/1‑250 (MQ=255)
                                                           gcggagTATTGCAGGGTTATCCTGCGATTTTCCAGCTGCAACGTTGCCTGCGCCAGCGCCTGCTCCGCCTCCTGGCTTGCGATATTGTTATTCTGCCAGGCAATGGCATGCTCTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCTCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTATATGTAACGACACCGTTCCGCGGACGTCTGGCGACCCGACCAAGTTCAACtt                                                                                                                                                                             <  1:101257/246‑1 (MQ=255)
                                                                      cAGGGTTATACTGCGATTTTCCAGCGGCAGATTTGACTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGAACAGGTTCAACTTCTCCTGTTc                                                                                                                                                                    >  2:100634/1‑249 (MQ=255)
                                                                                  gCGATTTTCCAGCGGCAGATTTGCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTg                                                                                                                                                        <  1:69251/249‑1 (MQ=255)
                                                                                                  agatttgactgagcgagcgacTGCTCCGCCTACTGGAGGGCGATATTGTTATTCTACCACGCAATGGAATGCACAGAGAGCATCTTGCCTTCCTGCCGCGATTTCAGTCCGTCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACGTCTGTTAGATGTAACGTCACCGTACCGCTGAAGTCTGGCGACCCGACCAGGTTCAACTTCTCCTGCTCCGCCAGCTGCGGCAACACCTGAGCTACCgg                                                                                                                                      >  2:150839/21‑251 (MQ=255)
                                                                                                        gCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGt                                                                                                                                 <  1:209769/250‑1 (MQ=255)
                                                                                                                          tCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCGGGCGACACGACCAGGTTCAACTTCTCCTGTTCACCCAGCGCCTCCAACACCTGAGCTACCGAACCGCCTTCCCCCATCAGCGTCAc                                                                                                              >  1:112370/1‑251 (MQ=255)
                                                                                                                             gCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACttt                                                                                                           >  1:120085/1‑251 (MQ=255)
                                                                                                                                        ggcgATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTg                                                                                                <  2:42718/251‑1 (MQ=255)
                                                                                                                                                          ccAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGt                                                                               >  2:123948/1‑250 (MQ=255)
                                                                                                                                                                                                              ccGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTATCTCCTTGcc                          <  1:7319/251‑1 (MQ=255)
                                                                                                                                                                                                                                      aatGCCTGCTTCCAGAGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACCCGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTATTGCGGCTTTGCAGCCTGTACGCAGGGCAACAGCATCAACAGTAGTGCGGCTATCCATTGCATCATTAGTATCTCCTTGCCGTTGCAGCAACCATTGTGGCGGtc  >  2:8369/3‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           
CGGTCATACTCCCTTTGGCACTCAGTAGCTTCTCCCCCGCTTTCGCCAGTTCTCCCGCGTCGGCGTATTGCAGGGTTATACTGCGATTTTCCAGCGGCAGATTTGCCTGCGCCCGCGCCTGCTCCGCCTCCTGGCGGGCGATATTGTTATTCTGCCAGGCAATGGAATGCACTGAGAGAATGTTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTATCTCCTTGCCGTTGCCACAACCATTGTGGCGGTT  >  NC_000913/3520262‑3520742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: