Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,542,237 IS1 (–) +9 bp coding (201‑209/597 nt) fimE → regulator for fimA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)24 (1.020) 23/496 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4542245 0 (0.000)coding (209/597 nt) fimE regulator for fimA
* ? NC_000913 3583428 =NA (NA)28 (1.190) 26/496 0.1 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4542237 = 0 (0.000)coding (201/597 nt) fimE regulator for fimA

TATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGT  >  NC_000913/4541992‑4542486
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                         
cgccattcatggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGAtt                                                                                                                                                                                                                                                      >  1:47480‑M2/246‑251 (MQ=255)
     gTATTCAGTCAAATATATCTCAGTTAGTAGTACTTCTATGGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTGTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATAGCGGCATGGGATGCGTATTAGTGAACTGCTTGAGCTGCATTATCATGACCTTGACCGTAATGAAGGTAGAAGAAAGATTCGCCGACTTAAGGGCGGATTTTCgg                                                                                                                                                                                                                                                 >  2:148532‑M2/1‑249 (MQ=255)
           gccatatcaatgatgttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagcggatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTCCCGTTc                                                                                                                                                                                                                                           <  2:6640‑M2/17‑1 (MQ=255)
             tcaCATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTTTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTTATGAAGGTAGAATAAATATTTCCCGACTGAAGAAAGGATTTTCgggcatgact                                                                                                                                                                                                                                         <  2:48152‑M2/251‑11 (MQ=255)
              atatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactgtagcacctcaaacacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCAcc                                                                                                                                                                                                                                        >  1:197182‑M2/232‑251 (MQ=255)
               aaaTATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactcc                                                                                                                                                                                                                                       >  1:99258‑M2/1‑239 (MQ=255)
                                     accgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGaa                                                                                                                                                                                                                 <  1:125348‑M2/43‑1 (MQ=255)
                                                    ggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGACGCCGTGGAACGCTgg                                                                                                                                                                                                  >  1:153916‑M2/194‑251 (MQ=255)
                                                              aactgcagttgccatgttttacggcagtgagagctgagagagcgctgatgtccggcggtgcttttgccggtacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcgcctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTCTCGACCGTTCCCCCGTTACGTGTTGATGAGCGGGAAGCCGTGGAACTCTGGACCCATGAAc                                                                                                                                                                                        <  2:120673‑M2/68‑1 (MQ=255)
                                                               actgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaaccggagggacagctgatagaaacagcagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACg                                                                                                                                                                                       >  1:200976‑M2/183‑251 (MQ=255)
                                                                 tgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTg                                                                                                                                                                                     >  2:71097‑M2/181‑251 (MQ=255)
                                                                 gtccggTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCTGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCTACTGAATAACTGATTTTCggtaatgactccaacttattgatagtgttttatgttgagataatgcccgatgactttgt                                                                                                                                                                                        >  2:39410‑M2/3‑189 (MQ=255)
                                                                                      cagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGAcc                                                                                                                                                                <  2:112092‑M2/92‑1 (MQ=255)
                                                                                            gCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGGCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                                                                                                                           >  2:213884‑M2/1‑162 (MQ=255)
                                                                                                agagatagcgctgaagtccagcggtgcttttgccgttacgcaccaccccgtaagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGATCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGTCTGACGc                                                                                                                                                      >  2:143243‑M2/150‑251 (MQ=255)
                                                                                                 cGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                                                                                                                     >  2:55393‑M2/1‑157 (MQ=255)
                                                                                                    atagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCGCCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCtata                                                                                                                                                  <  1:118716‑M2/106‑1 (MQ=255)
                                                                                                    atagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccacgggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCtata                                                                                                                                                  <  1:167825‑M2/106‑1 (MQ=255)
                                                                                                      tGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCTTTATCGGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcgccaccgattttgagaacgacagcgacctcc                                                                                                                                                 >  1:187448‑M2/1‑152 (MQ=255)
                                                                                                             gtgtccggcgttgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGCACGTGCTAACTTGACAGGCGCTGACCCGACTGACGCTATATTTATTtct                                                                                                                                         >  2:124709‑M2/137‑251 (MQ=255)
                                                                                                               gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTcg                                                                                                                                       <  1:87266‑M2/117‑1 (MQ=255)
                                                                                                                          cAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                                                                                                            <  2:240597‑M2/251‑120 (MQ=255)
                                                                                                                            tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTc                                                                                                                            <  1:168521‑M2/128‑1 (MQ=255)
                                                                                                                               attattGTCTTATGCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaactgattgatagtgtgttatgttcagataatgcccgatgacttggtcatgcagctccaccgattttgagaacgacagcgacggccgtcccagccgtgccaggtgctgcctc                                                                                                                       >  2:221418‑M2/1‑127 (MQ=255)
                                                                                                                                          aTTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt                                                                                                            >  1:58899‑M2/1‑116 (MQ=255)
                                                                                                                                              cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGcc                                                                                                        >  2:71290‑M2/104‑251 (MQ=255)
                                                                                                                                               ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCt                                                                                                       <  2:142606‑M2/149‑1 (MQ=255)
                                                                                                                                                        tCGGCAGGTGATGCTTATTATTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAGGAAGGTAGAATAAATATGCGCCGACTGAAGAACTGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacatggacttttttcccagccgtgccatgtgctgcctcagatgcaggttatgccgctcaatt                                                                                               >  1:35221‑M2/1‑102 (MQ=255)
                                                                                                                                                           aaacaggagggacagctgatagaaacagaagcccctggagcacctcaaaaacaccatcataccctaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGTTGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTc                                                                                           <  1:130863‑M2/161‑1 (MQ=255)
                                                                                                                                                                     cGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcg                                                                                 >  1:100227‑M2/1‑89 (MQ=255)
                                                                                                                                                                        aTTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgctt                                                                              >  1:113221‑M2/1‑86 (MQ=255)
                                                                                                                                                                           aGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgct                                                                           <  2:125348‑M2/251‑169 (MQ=255)
                                                                                                                                                                            gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGaa                                                                          <  2:214258‑M2/178‑1 (MQ=255)
                                                                                                                                                                            gTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctg                                                                          <  2:157793‑M2/251‑170 (MQ=255)
                                                                                                                                                                                  aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTgg                                                                     >  2:20867‑M2/68‑250 (MQ=255)
                                                                                                                                                                                      gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCg                                                                <  2:229645‑M2/188‑1 (MQ=255)
                                                                                                                                                                                             cATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATGTTCggtaatgactccaacttattgatattgtgttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaagtcgctgcttatatcgggtgctgattacgtgcagctttcc                                                         >  2:34681‑M2/1‑65 (MQ=255)
                                                                                                                                                                                               ttATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccct                                                       <  1:6640‑M2/251‑189 (MQ=255)
                                                                                                                                                                                                tATCAGGACCTTGACCTTAATGAAGGAAGAATAAATATTCACCGACTGAAGAACGGATTTTCggtaatgactccaaattattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttccttt                                                      <  1:120673‑M2/251‑190 (MQ=255)
                                                                                                                                                                                                    acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCAt                                                  >  1:31798‑M2/50‑251 (MQ=255)
                                                                                                                                                                                                    aGGACCTTGACCTTAATGAAGGCAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcagg                                                  <  2:218029‑M2/251‑194 (MQ=255)
                                                                                                                                                                                                     cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATc                                                 <  2:126440‑M2/203‑1 (MQ=255)
                                                                                                                                                                                                            gaccttAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattc                                          >  2:114185‑M2/1‑50 (MQ=255)
                                                                                                                                                                                                                 catcatacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCATGCCTATCGCATTATTCGCGATGCCTGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTaa                                     <  1:99136‑M2/215‑1 (MQ=255)
                                                                                                                                                                                                                      tacactaaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCAt                                >  1:48433‑M2/32‑251 (MQ=255)
                                                                                                                                                                                                                      aaGGTAGCATAAATCTTCGCCGACTGAAGAACGGATTTTCggtaatgactcaaacttattgatagtgttttatgttcagataatgaccgatgaatttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggc                                <  2:99136‑M2/251‑212 (MQ=255)
                                                                                                                                                                                                                         gTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccag                             >  2:190072‑M2/1‑37 (MQ=255)
                                                                                                                                                                                                                            aaatcagtaagttggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGc                          >  1:213143‑M2/26‑251 (MQ=255)
                                                                                                                                                                                                                               aaaatatTCGCCGACTGAAGAACGGATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatcc                       >  2:50808‑M2/2‑31 (MQ=255)
                                                                                                                                                                                                                                        tggcagcatcaccCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAAtt               <  2:8258‑M2/237‑1 (MQ=255)
                                                                                                                                                                                                                                                    cCGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTACGGCATGCTTGCGGTTATGAATTGGCGGAGCgtggt  >  2:56017‑M2/2‑251 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                         
TATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGT  >  NC_000913/4541992‑4542486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.