Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,253,002	C→T	intergenic (+17/+83)	dhaR → / ← ycgV	DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,253,002	0	C	T	100.0%	187.0 / NA	54	intergenic (+17/+83)	dhaR/ycgV	DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (25/29);  total (25/29)

CATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCTCCCGGG  >  NC_000913/1252764‑1253245                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     cATCTGTTTACCGAGCAGGCGACAGCTGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCCCTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGGATGAAAGACAGAAACGATTTTTTATACATCagg                                                                                                                                                                                                                                          >  1:496749/1‑250 (MQ=255)         tACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTAATTGGGATCGGCCGCACTACGCTGTGGAGGAAAATGAAACAAAATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGGATGAAAGAAAGAAACGATTTTTGATACATACGAGTGATCTg                                                                                                                                                                                                                                  >  1:344716/1‑251 (MQ=255)            cGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCCGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAAAATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTAt                                                                                                                                                                                                                               >  1:30255/1‑251 (MQ=255)               gCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTc                                                                                                                                                                                                                            <  1:153784/251‑1 (MQ=255)                           tgatgTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGGAAAAGAAGCAACATGGCCTTGATGCAGGGCAGGTTAAGCGCCGGGGATGAAAAACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCAc                                                                                                                                                                                                               >  2:65625/1‑251 (MQ=255)                                                 tCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAGATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGt                                                                                                                                                                                          <  2:394274/250‑1 (MQ=255)                                                    accaGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGGATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTa                                                                                                                                                                                       >  1:62494/1‑250 (MQ=255)                                                        gTCTGACATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCTCATTCAGGTTAAGTCGGCATTAATTCGGATCGGCCGCCCTAAGCTGCGGCGGAAAATTAAGCCACATTGCCTTTTTACCAGGCCGTTTAATCTCCGGGTTTTACACAAATAAACGATTTTTTATACATCCAAGCGATCTGTATTTCATT‑CCGGCGCCCACTACCACTTTTATGCATCGTTTCAGGGc                                                                                                                                                                                  >  1:538720/1‑251 (MQ=255)                                                           tGTCATTTGCGGAAGTTGAAACAGCGGCAATTCTTAACGCAGCCCAGGTCACAGGCGGTCCCATTAAAGGAATGTCGGCTTTAATTGGGATCGGCCGCACTACGCTGTGGCGGAAACAGAAGCAACATGGCCTTGATGCCGGGCAGTTTAAGCGCCCGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTTAGGGCTTg                                                                                                                                                                               >  1:493427/1‑251 (MQ=255)                                                              cATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAATGGCTTGTc                                                                                                                                                                             <  1:213533/250‑1 (MQ=255)                                                                   gCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTGACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGGCTATccc                                                                                                                                                                       <  2:579930/251‑1 (MQ=255)                                                                        aGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGGTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTTAGCGCCGGGTATGAAGGACAGAAAAGATTTTTGATAACTCAGAGGGATCTGGATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAAGGGTTGTCTTTCCCGCACt                                                                                                                                                                  >  2:427915/1‑251 (MQ=255)                                                                        aGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGACGCATTAAGGAAATGCCCGCTTTTCTCGGGATCCGACGCACTTCGCTGTGACGGGAAATGAAGGAAAATAGGATTGATGAAGGGGAATTTAAAAGCCGGGGATGAAAGACAAAAACGATTTTTGAAACATCAGCGGGCTCTGGATTTCATT‑CCGGCGCACGCTAACAATTTTTAACATCGTTTTAAGGCTTGTCTATCCCGCaat                                                                                                                                                                  >  1:288388/1‑249 (MQ=255)                                                                         gTTGAAAAAGAGGCAATTAGTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACtt                                                                                                                                                                 <  1:193017/251‑1 (MQ=255)                                                                           tGAAAAAGCGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCCGCCGCACTACGCTGTTGCGGAAAATGAAGCAAAATGGGATTGATGCAGGGCCGTTTAAACGCCCGGGATGAAAGACAGAAACGATTTTTGGTACATCAGAGGGATATGTCTTTCATTTCCGG‑GCCCGCCAACAATTTTTAGCATCGTTTTAGGGCGTTTCTATCCCGCACTTa                                                                                                                                                                >  2:454695/1‑250 (MQ=255)                                                                                 agagGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGAAAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCCCTTAAAAGCTg                                                                                                                                                         >  1:183597/1‑251 (MQ=255)                                                                                   agGCAATTATGAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGaa                                                                                                                                                       <  2:323334/251‑1 (MQ=255)                                                                                    ggCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTTAGGAAATTTCGGCTTTACTTGGGATCGGCCGCACTACGCCGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAAAGATTTTTGATAAATCAGAGTGGTCTGTATTTCATT‑CCGGCGCACCCTAACAATTTTTAGCATCGTTTAAGGGCTTGTCTATCCCCCACTTAAAAACTGa                                                                                                                                                        >  2:502663/1‑249 (MQ=255)                                                                                              aaCGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATAtcctc                                                                                                                                            >  1:507927/1‑251 (MQ=255)                                                                                               aCGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATGTCATT‑CCGGCGCACGCTAACAAGTTTCAGCATCGTTTAATGGCTTGTCGATCCCGCACTTAAAAGCTGAAGCGATAtcctcc                                                                                                                                           <  1:520306/251‑1 (MQ=255)                                                                                               aCGCAGCCCAGGACACAGGCGGTCGCATTCAGGAAATTTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGTAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTGGATACATCAGAGTGATCTGTATGTCATT‑CCGGCGTGCGCTAACAATTTTCAGCAGCGTTTAAGTGCTTGTTTATCCCGCACTTAAAAGCTGAAGCGATAtcctcc                                                                                                                                           <  1:520321/251‑1 (MQ=255)                                                                                                 gCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAAAGAAGCAACATGGCATTGATGCAGGGCCGGTTAAACGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGGGATCTGTATTTCATT‑TCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCgg                                                                                                                                         >  2:242914/1‑250 (MQ=255)                                                                                                    gCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGAGGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGa                                                                                                                                      <  1:304356/251‑1 (MQ=255)                                                                                                     cccAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGAc                                                                                                                                     <  1:544817/251‑1 (MQ=255)                                                                                                                   ggTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCa                                                                                                                        >  1:379235/1‑250 (MQ=255)                                                                                                                       gCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAagag                                                                                                                   <  1:529120/251‑1 (MQ=255)                                                                                                                           tCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGtt                                                                                                                <  1:332545/250‑1 (MQ=255)                                                                                                                             aGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTAcc                                                                                                             <  2:30255/251‑1 (MQ=255)                                                                                                                                    gTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCgt                                                                                                       <  1:507801/250‑1 (MQ=255)                                                                                                                                                  ggATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCg                                                                                          >  1:445883/1‑249 (MQ=255)                                                                                                                                                    aTCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAAAGGTTACCCTGCGGTTAATCCGCTTCgagtt                                                                                      >  2:5673/1‑249 (MQ=255)                                                                                                                                                      cGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTGTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGATGCGATATCCGCCGTTGACTGGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAg                                                                                    <  1:388661/251‑1 (MQ=255)                                                                                                                                                           gCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAGGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtgt                                                                               <  1:427915/251‑1 (MQ=255)                                                                                                                                                                aCGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtgtgtg                                                                            <  2:577208/249‑1 (MQ=255)                                                                                                                                                                aCGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtgtgtg                                                                            <  2:183597/249‑1 (MQ=255)                                                                                                                                                                     gtgGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCtgtttg                                                                     <  1:465484/251‑1 (MQ=255)                                                                                                                                                                     gtgGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCtgtt                                                                       <  1:421012/249‑1 (MQ=255)                                                                                                                                                                       ggCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCtgtttgtt                                                                   >  1:199101/1‑251 (MQ=255)                                                                                                                                                                       ggCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCtgtttgt                                                                    <  2:147124/250‑1 (MQ=255)                                                                                                                                                                         cGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTtat                                                                 >  1:529051/1‑251 (MQ=255)                                                                                                                                                                                    gCAACATGGCCTTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGAACTg                                                      >  2:378093/1‑251 (MQ=255)                                                                                                                                                                                         aTGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATATGTGCTGTTTGTTATACTGTGCACTGACTcc                                                 <  1:65625/251‑1 (MQ=255)                                                                                                                                                                                         aTGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTGTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATGCTGTGCACTGACTcc                                                 <  2:480747/251‑1 (MQ=255)                                                                                                                                                                                            gCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGCCAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCAc                                              >  2:361556/1‑251 (MQ=255)                                                                                                                                                                                                 gATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCGGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTa                                                                                                               <  2:409727/181‑1 (MQ=255)                                                                                                                                                                                                 gATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTa                                                                                                               >  1:409727/1‑181 (MQ=255)                                                                                                                                                                                                  aTGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAACCGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCAAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCGGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGGGCACTGACTCCCACGCCGtt                                        <  2:218909/251‑1 (MQ=255)                                                                                                                                                                                                          cAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGc                                <  1:180973/251‑1 (MQ=255)                                                                                                                                                                                                           aGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATATAATGTGTGCTGTTTGTTATACTGTGCACTGCCTCCCACGCCGTTATTCCAGcc                               <  2:180229/251‑1 (MQ=255)                                                                                                                                                                                                              ttAAGCGCCGTGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTTCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCAt                             <  1:328946/250‑1 (MQ=255)                                                                                                                                                                                                                   cgcCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCtt                       >  2:216851/1‑251 (MQ=255)                                                                                                                                                                                                                           aTGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTGGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTg               <  1:34179/251‑1 (MQ=255)                                                                                                                                                                                                                                   cAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACCATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTtctc       >  1:376437/1‑251 (MQ=255)                                                                                                                                                                                                                                          gATTTTTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCTCCCggg  >  2:96268/1‑249 (MQ=255)                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                     CATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATT‑CCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCTCCCGGG  >  NC_000913/1252764‑1253245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑