| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,748 | 0 | C | A | 37.5% | 43.3 / 25.3 | 53 | E55* (GAG→TAG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (21/9); new base A (1/17); total (22/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.30e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAT > NC_000913/3177500‑3177992 | ggTGCCCCCCGGGCTCGCCAGAAATCTAAACGCCGGTTTGGCCCGTTTGACTATCAGCCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCa < 2:240686/250‑1 (MQ=255) cccccccGGGTTGGCCAGAAAACTTACCCCCGGTTTGGTCCGTTTGTATATCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCaaaaa < 1:269466/250‑1 (MQ=255) ccGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑cc > 2:23355/1‑251 (MQ=255) ccGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGAATATCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCACAAATTT‑cc > 2:550708/1‑251 (MQ=255) tgggtcgttttaactcccgtccccGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACCCTTTCCCCCTCTTCAATCATCCCGGCAACCATCCCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCACCACCCACTGGGGCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCGCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGt < 1:513960/229‑1 (MQ=255) tGGTCCGTTTGACTATCAGTCCCGCC‑TCTTAAATCGCTTCGCGACGAGCAACATATTCCACACTTTCACCCTCTTCAATAATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTg > 1:241253/1‑251 (MQ=255) ccctttgactttccccccccccc‑TCTCCAACCGCTCCGCGCCGGACACCATCTCCCACCCTTCCCCCCTCTTCAATCACCCCGGCACCCATCCCCAGTAGCCAGGGGGTTT‑C‑GCGGGTGTCGCCCGCGGCAACCCGAA‑TCTGCTCAACCACCACAACTTCATCCCGCACTGGGTAAAGGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAGTTC‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGaa < 2:565733/229‑1 (MQ=255) gttatgcacacctccccccGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTCCCACCCTTTCCCCCTCTCCAAGCACCCCGGCAACCATCCCCAGTAGCAAGGGGGTTT‑C‑GCGGGTGTCGGACGCGGCAACCCGAT‑TCTGCTCAATCCGCACACCTCCATCCCGCACTGGGACAAAGGATAGCAAGCCTGGGGCGTGCCCGCTCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATa < 2:45989/235‑1 (MQ=255) cGTTTGACTCTCACTCCCCCCCTCTTCAATCTCTCCGCGACGGCCAACATCTCCCACATTTTCCCCCTCTCCAATCACCCCGGCAACCATCTCCAGTAGCCAAGGGTTTT‑C‑GCTGGTGTCGTCCGCGGAAATCCAAT‑TCTGCCCAACCAGCACACCTCCACCCCGCACGGGGTCAAAGGGTAGCAAGCCGGCGGCTTTCCCGCGCTAAAAATTTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAAt < 2:444734/250‑1 (MQ=255) ttgtaaCTATCACCCCCGCC‑TCTACACTCCCTTCGCGACGGGCACCATCTTCCACCCTTTCCCCCTCTTCAATCACCCCGGCACCCATCTCCAGTAGCAAAGGGGTTT‑G‑GCGGGGGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCCCAACTTCATCACGCACTGGGTCAAGGGGTAAAAAGACTGCGGCGTGACCCCGCAAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAg < 2:151130/245‑1 (MQ=255) gTTTGACTATCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAAt > 2:144798/1‑248 (MQ=255) cctatagtccccccc‑TCTTAAATCGCTTCGCGACGGGCAACATCTCCCACACTTCCCCCCTCTTAAACCATCCCGGCAACCATCTCCAGTAGCCAGGGGGTTT‑C‑GCGGGTGTCGTACGCGGCAATCCGAA‑TCTGCTAAATCAGCACAACTTCATCACCCACGGGGTCAAAGGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTA‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATg < 1:449562/238‑1 (MQ=255) tCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACg > 2:440619/1‑250 (MQ=255) aTCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTa > 2:2600/1‑250 (MQ=255) ccGCTTCGCGACGGGCACAATCTTCCCCTTTTCCACCCTCCTCAATCTCCCCGGCAACCATCTCCGGTAGCCAAGGGGTTT‑C‑CTTGGTGTCGTACGCGGAAACCCGAA‑TTTGCTCAACCAGCACAACTTCACCCCGCACTGGGTAAAGGGGTAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAAt < 1:334856/250‑1 (MQ=255) cctccgcgACGGGCACCTTCTCCCACCCTTCCCCCCTCTTCAATCACCCCGGCAACCTCCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGGCGTACGCGGCACCCCGAA‑TCTCCTAAACCAGCAAAACTACATCACGCACTGGGTAAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGa < 2:532959/247‑1 (MQ=255) cgACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaaa > 1:37333/1‑250 (MQ=255) caactcctcccccctttccccccTCTTCAACCCCCCCGGCAACCATCCCCAGGAGCAAGGGGGTTT‑C‑GCGGGTGTCGTACGCGGCAATCCAAA‑TCTGCTCAACCAGCAAACCTCCACCACGCCCTGGGTAAAAGGGTAGCAAGCCTGCGGCGTGACCGCCCT‑AAAAATTT‑CCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAA‑GCCGCGAt < 2:157509/231‑1 (MQ=255) aaCATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGAt > 1:156115/1‑251 (MQ=255) aaCATCTTCCACACTTTCACACTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGAt > 2:261617/1‑251 (MQ=255) aCATCTTCCACCCTTTCACCCTCTGCAATCACCCCGGCACCCATCTCCAGGAGC‑AAGGGGTTTTC‑GGTGGTGTCGTACGCGGCAATCCGAA‑TCTGCCCAAGCAGCACAACTTCATCACGCACGGGGTCAAAGGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTACTGAAAAAAAGCCGCGATa < 2:270432/251‑1 (MQ=255) acttttCCACACTTCCCCCCTCTTAAATCCCCCCGGAAACCATCCCCAGGA‑CCCAGGGGTTT‑CCGCGGGTGCCGTACGCGGCAACCCGAT‑TCTGCTCAATCAGCACATCTCCATCACGCACGGGGTCAAGGGTTAGCAAGCCTGCGGGGTGACCGCGCT‑AAAAATTT‑CCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATaa < 1:74277/247‑1 (MQ=255) cacaCTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGttt > 1:497089/1‑251 (MQ=255) acacTTTCACCCTCTTCACTCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtc > 2:474604/1‑251 (MQ=255) ttcccccTCTACAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAACCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACGGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGt < 1:528826/246‑1 (MQ=255) tcccccTCTTCAATCACCCCGGCAACCATCCCCAGTAGC‑AAGGGGTTTTC‑GCTGGTGTCGTCCGCGGAAATCCGAA‑TTTGCTCAATCAGCACACCTTCATCCCGCACGGGGTAAAAGGGTAGAAAGACTGCGGCGTGCCCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTg < 1:567319/247‑1 (MQ=255) cccctcctcaaaccaccccGGCAACCATTCCCATGAGCAAAGGGGTTT‑C‑GTTGGTGGCGTACGCG‑CAATCCAAAATCTGTCCAATCAGCACAATTTCATCACGCACGGGGTAAAAGGGAAGCAAGACTGCGGCGTGACCGCGCAAAAAAATTG‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCa < 2:529136/235‑1 (MQ=255) cACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGc > 1:519161/1‑250 (MQ=255) caaccacccagcccaacATCTCCAGTAGCAGAGGGTTTT‑G‑TCGGGTGGCGTCCGCGGAAACCAGAA‑TCTGCTAAATCAGCACATCTTCACCACGCACGGGGTAAAAGGGTAGCGAGGCTGGGGCGTGCCCGCGCT‑AAAAATTT‑CCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCt < 2:368495/235‑1 (MQ=255) cgccAACCATCTCCAGTA‑CCAAAGGGTTT‑CCTCTGGTACCGTACGCGGCAATCCGAA‑TCTTCTAAATCATCACAACTTCACCACTCACGGGGTCAAAGGGTAGCAAGCCGGCGGCGTGACCGCGCTAAAAATTTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGttt < 1:548623/248‑1 (MQ=255) ggaacccacctcCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCAAA‑TCTGCTCAATCAGCACAACTCCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGCCCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGtttt < 1:436743/242‑1 (MQ=255) tcCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGt > 2:313847/1‑251 (MQ=255) ccccattgcccaGGGGTTTTC‑GCGGGTGTCGTACGCGCCAACCCGAA‑TCTGCTCAACCAGCACACCTCCATCCCGCACTGGTTCAAAGGGTAGAAAGACTGCGGCGGGACCGCGCTAAAAAATTC‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATg < 2:424809/240‑1 (MQ=255) gagcAAGGGGTTTTC‑GCGGGTGTCGTACGCGGCAACCCGAA‑TCTGCCCAATCAGCAAAACTCCAACACGCCTTGGGTAAAAGGGTAACAAAACGGCGGGGTGCCCGCGCT‑AAAAATTT‑CCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACgg < 2:53268/248‑1 (MQ=255) ggggTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCCCAATCAGCACAACTTCATCCCGCACGGGGTAAAAGGGTAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGtt < 2:186342/251‑1 (MQ=255) gggTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTg > 1:265012/1‑251 (MQ=255) tGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATg > 2:505458/1‑228 (MQ=255) gggtttCGTCCGCGGCAATCCGAA‑TCTGCTCAATCAGCACACCTCCATCACGCACTGGGACAAAGGGTAGAAAGACGGCGGCGTGACCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATGTCTACATCGTTTTTGCCAAATg < 1:505458/223‑1 (MQ=255) ggTGTCGTCCGCGCCAATCCGAA‑TCTGCCAAACCACCACACCTTCATCCCCCACTGGGACAAAGGGAAGCAACACTGGGGCGGTACCGCGCGCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCtt < 1:194907/249‑1 (MQ=255) gggCAATCAGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTAAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTC‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAAt < 2:184846/250‑1 (MQ=255) aTCCGAA‑TCTGCTCAATCACCACAACTTCACCCCGCACTGGGTAAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCt < 1:529802/251‑1 (MQ=255) ccaaatctgctaaagcgccacaACTTCAGCACGCAGTGGGTAAAAGGGGAGAAAGACGGCGGGGTGCCCGCGC‑AAAAAATTT‑CCCCGCCGCACCTCATGACTCATTTGCCCGGTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGAGAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAAGGGGTAGGTTGTCTGGCTTAAGCTTTGTTAATGTCCTg < 2:385899/232‑1 (MQ=255) gCTCAATCAGCACAACTTCATCACGCACTGGGTCAACGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCCCCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAAt > 2:328625/1‑250 (MQ=255) aaTCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGGCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTg > 1:116475/1‑250 (MQ=255) cAGCACATCTTCATCCCGCACTGGGTCAAAGGGAAGCAAGACGGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAAtt < 1:84135/251‑1 (MQ=255) ccaaaaCTCCATCCCGCAGTGGGTCAAAGGGAAGCAAGACGGCGGCGTGACCGCGC‑CAAAAATTTTCCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTaa < 2:519161/247‑1 (MQ=255) acaACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAAt > 1:94743/1‑251 (MQ=255) caCGCACTGGGTCAAAGGGTAGCAAGACGGGGGCGTGACCGCGCTAAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCa < 1:83755/251‑1 (MQ=255) gggTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAACATTT‑CCC‑GCCGCACCTCATGCCTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGtt > 2:260346/1‑251 (MQ=255) aGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGc > 1:570741/1‑251 (MQ=255) aaGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTg > 2:14393/1‑249 (MQ=255) gACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGc > 1:523973/1‑250 (MQ=255) cgcgCT‑AAAAATTT‑CCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAt < 1:231503/251‑1 (MQ=255) | GGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCCGTTTGACTATCAGTCCCGCC‑TCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑C‑GCTGGTGTCGTACGCGGCAATCCGAA‑TCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTT‑CCC‑GCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAAT > NC_000913/3177500‑3177992 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |